未验证 提交 c069890e 编写于 作者: rictjo's avatar rictjo 提交者: GitHub

example4.py

上级 72d0ed23
......@@ -156,7 +156,7 @@ if __name__ == '__main__' :
print ( S2/N-S*S/N/N )
```
# Usage example 4 : Diabetes analysis
# [Example 4](https://gist.githubusercontent.com/richardtjornhammar/a9704b238c74080fdea0827608a10a9a/raw/277ca835b8c56c3bb25d21e28e0d0eaa1661201f/example4.py) : Diabetes analysis
Here we show how to use a novel multifactor method on a diabetes data set to deduce important transcripts with respect to being diabetic. The data was obtained from the [Broad Insitute](http://www.gsea-msigdb.org/gsea/datasets.jsp) and contains gene expressions from a microarray hgu133a platform. We choose to employ the `Diabetes_collapsed_symbols.gct` file since it has already been collapsed down to useful transcripts. We have entered an `impetuous-gfa` ( version >= `0.50.0` ) environment and set up the a `diabetes.py` file with the following code content:
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