From c069890e46b2587064ed56b1482bca414f70ce73 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Richard=20Tj=C3=B6rnhammar?= Date: Wed, 18 Aug 2021 13:19:56 +0200 Subject: [PATCH] example4.py --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index f6a384b..ae3e549 100755 --- a/README.md +++ b/README.md @@ -156,7 +156,7 @@ if __name__ == '__main__' : print ( S2/N-S*S/N/N ) ``` -# Usage example 4 : Diabetes analysis +# [Example 4](https://gist.githubusercontent.com/richardtjornhammar/a9704b238c74080fdea0827608a10a9a/raw/277ca835b8c56c3bb25d21e28e0d0eaa1661201f/example4.py) : Diabetes analysis Here we show how to use a novel multifactor method on a diabetes data set to deduce important transcripts with respect to being diabetic. The data was obtained from the [Broad Insitute](http://www.gsea-msigdb.org/gsea/datasets.jsp) and contains gene expressions from a microarray hgu133a platform. We choose to employ the `Diabetes_collapsed_symbols.gct` file since it has already been collapsed down to useful transcripts. We have entered an `impetuous-gfa` ( version >= `0.50.0` ) environment and set up the a `diabetes.py` file with the following code content: -- GitLab