The focus of this change is to make the API more accessible.
References to method and classes should be linked to make it easy to
navigate around.

This patch makes exzessiv use of `rdoc-ref:` to provide more readable
docs. This makes it possible to document `ActiveRecord::Base#save` even
though the method is within a separate module
`ActiveRecord::Persistence`. The goal here is to bring the API closer to
the actual code that you would write.

This commit only deals with Active Record. The other gems will be
updated accordingly but in different commits. The pass through Active
Record is not completely finished yet. A follow up commit will change
the spots I haven't yet had the time to update.

/cc @fxn