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132a26af
编写于
6月 14, 2017
作者:
C
caoying03
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
refine NER.
上级
f27154e7
变更
19
展开全部
显示空白变更内容
内联
并排
Showing
19 changed file
with
100604 addition
and
273 deletion
+100604
-273
hsigmoid/README.md
hsigmoid/README.md
+0
-0
hsigmoid/hsigmoid_conf.py
hsigmoid/hsigmoid_conf.py
+0
-0
hsigmoid/hsigmoid_predict.py
hsigmoid/hsigmoid_predict.py
+0
-0
hsigmoid/hsigmoid_train.py
hsigmoid/hsigmoid_train.py
+0
-0
hsigmoid/images/binary_tree.png
hsigmoid/images/binary_tree.png
+0
-0
hsigmoid/images/network_conf.png
hsigmoid/images/network_conf.png
+0
-0
hsigmoid/images/path_to_1.png
hsigmoid/images/path_to_1.png
+0
-0
hsigmoid/index.html
hsigmoid/index.html
+0
-0
sequence_tagging_for_ner/.gitignore
sequence_tagging_for_ner/.gitignore
+2
-0
sequence_tagging_for_ner/data/download.sh
sequence_tagging_for_ner/data/download.sh
+2
-2
sequence_tagging_for_ner/data/test
sequence_tagging_for_ner/data/test
+0
-2
sequence_tagging_for_ner/data/train
sequence_tagging_for_ner/data/train
+0
-2
sequence_tagging_for_ner/data/vocab.txt
sequence_tagging_for_ner/data/vocab.txt
+100232
-0
sequence_tagging_for_ner/infer.py
sequence_tagging_for_ner/infer.py
+62
-0
sequence_tagging_for_ner/ner.py
sequence_tagging_for_ner/ner.py
+0
-267
sequence_tagging_for_ner/network_conf.py
sequence_tagging_for_ner/network_conf.py
+109
-0
sequence_tagging_for_ner/reader.py
sequence_tagging_for_ner/reader.py
+68
-0
sequence_tagging_for_ner/train.py
sequence_tagging_for_ner/train.py
+101
-0
sequence_tagging_for_ner/utils.py
sequence_tagging_for_ner/utils.py
+28
-0
未找到文件。
word_embedding
/README.md
→
hsigmoid
/README.md
浏览文件 @
132a26af
文件已移动
word_embedding
/hsigmoid_conf.py
→
hsigmoid
/hsigmoid_conf.py
浏览文件 @
132a26af
文件已移动
word_embedding
/hsigmoid_predict.py
→
hsigmoid
/hsigmoid_predict.py
浏览文件 @
132a26af
文件已移动
word_embedding
/hsigmoid_train.py
→
hsigmoid
/hsigmoid_train.py
浏览文件 @
132a26af
文件已移动
word_embedding
/images/binary_tree.png
→
hsigmoid
/images/binary_tree.png
浏览文件 @
132a26af
文件已移动
word_embedding
/images/network_conf.png
→
hsigmoid
/images/network_conf.png
浏览文件 @
132a26af
文件已移动
word_embedding
/images/path_to_1.png
→
hsigmoid
/images/path_to_1.png
浏览文件 @
132a26af
文件已移动
word_embedding
/index.html
→
hsigmoid
/index.html
浏览文件 @
132a26af
文件已移动
sequence_tagging_for_ner/.gitignore
0 → 100644
浏览文件 @
132a26af
*.pyc
*.tar.gz
sequence_tagging_for_ner/data/download.sh
浏览文件 @
132a26af
wget http://cs224d.stanford.edu/assignment2/assignment2.zip
wget http://cs224d.stanford.edu/assignment2/assignment2.zip
unzip assignment2.zip
unzip assignment2.zip
cp
assignment2_release/data/ner/wordVectors.txt
data
/
cp
assignment2_release/data/ner/wordVectors.txt
.
/
cp
assignment2_release/data/ner/vocab.txt
data
/
cp
assignment2_release/data/ner/vocab.txt
.
/
rm
-rf
assignment2.zip assignment2_release
rm
-rf
assignment2.zip assignment2_release
sequence_tagging_for_ner/data/test
浏览文件 @
132a26af
-DOCSTART- -X- O O
CRICKET NNP I-NP O
CRICKET NNP I-NP O
- : O O
- : O O
LEICESTERSHIRE NNP I-NP I-ORG
LEICESTERSHIRE NNP I-NP I-ORG
...
...
sequence_tagging_for_ner/data/train
浏览文件 @
132a26af
-DOCSTART- -X- O O
EU NNP I-NP I-ORG
EU NNP I-NP I-ORG
rejects VBZ I-VP O
rejects VBZ I-VP O
German JJ I-NP I-MISC
German JJ I-NP I-MISC
...
...
sequence_tagging_for_ner/data/vocab.txt
0 → 100644
浏览文件 @
132a26af
此差异已折叠。
点击以展开。
sequence_tagging_for_ner/infer.py
0 → 100644
浏览文件 @
132a26af
import
gzip
import
reader
from
network_conf
import
*
from
utils
import
*
def
infer
(
model_path
,
batch_size
,
test_data_file
,
vocab_file
,
target_file
):
def
_infer_a_batch
(
inferer
,
test_data
,
id_2_word
,
id_2_label
):
probs
=
inferer
.
infer
(
input
=
test_data
,
field
=
[
"id"
])
assert
len
(
probs
)
==
sum
(
len
(
x
[
0
])
for
x
in
test_data
)
for
idx
,
test_sample
in
enumerate
(
test_data
):
start_id
=
0
pred_str
=
""
for
w
,
tag
in
zip
(
test_sample
[
0
],
probs
[
start_id
:
start_id
+
len
(
test_sample
[
0
])]):
pred_str
+=
"%s[%s] "
%
(
id_2_word
[
w
],
id_2_label
[
tag
])
print
(
pred_str
.
strip
())
start_id
+=
len
(
test_sample
[
0
])
word_dict
=
load_dict
(
vocab_file
)
word_dict_len
=
len
(
word_dict
)
word_reverse_dict
=
load_reverse_dict
(
vocab_file
)
label_dict
=
load_dict
(
target_file
)
label_reverse_dict
=
load_reverse_dict
(
target_file
)
label_dict_len
=
len
(
label_dict
)
# initialize PaddlePaddle
paddle
.
init
(
use_gpu
=
False
,
trainer_count
=
1
)
parameters
=
paddle
.
parameters
.
Parameters
.
from_tar
(
gzip
.
open
(
model_path
,
"r"
))
predict
=
ner_net
(
word_dict_len
=
word_dict_len
,
label_dict_len
=
label_dict_len
,
is_train
=
False
)
inferer
=
paddle
.
inference
.
Inference
(
output_layer
=
predict
,
parameters
=
parameters
)
test_data
=
[]
for
i
,
item
in
enumerate
(
reader
.
data_reader
(
test_data_file
,
word_dict
,
label_dict
)()):
test_data
.
append
([
item
[
0
],
item
[
1
]])
if
len
(
test_data
)
==
batch_size
:
_infer_a_batch
(
inferer
,
test_data
,
word_reverse_dict
,
label_reverse_dict
)
test_data
=
[]
_infer_a_batch
(
inferer
,
test_data
,
word_reverse_dict
,
label_reverse_dict
)
test_data
=
[]
if
__name__
==
"__main__"
:
infer
(
model_path
=
"models/params_pass_0.tar.gz"
,
batch_size
=
2
,
test_data_file
=
"data/test"
,
vocab_file
=
"data/vocab.txt"
,
target_file
=
"data/target.txt"
)
sequence_tagging_for_ner/ner.py
已删除
100644 → 0
浏览文件 @
f27154e7
import
math
import
gzip
import
paddle.v2
as
paddle
import
paddle.v2.evaluator
as
evaluator
import
conll03
import
itertools
# init dataset
train_data_file
=
'data/train'
test_data_file
=
'data/test'
vocab_file
=
'data/vocab.txt'
target_file
=
'data/target.txt'
emb_file
=
'data/wordVectors.txt'
train_data_reader
=
conll03
.
train
(
train_data_file
,
vocab_file
,
target_file
)
test_data_reader
=
conll03
.
test
(
test_data_file
,
vocab_file
,
target_file
)
word_dict
,
label_dict
=
conll03
.
get_dict
(
vocab_file
,
target_file
)
word_vector_values
=
conll03
.
get_embedding
(
emb_file
)
# init hyper-params
word_dict_len
=
len
(
word_dict
)
label_dict_len
=
len
(
label_dict
)
mark_dict_len
=
2
word_dim
=
50
mark_dim
=
5
hidden_dim
=
300
mix_hidden_lr
=
1e-3
default_std
=
1
/
math
.
sqrt
(
hidden_dim
)
/
3.0
emb_para
=
paddle
.
attr
.
Param
(
name
=
'emb'
,
initial_std
=
math
.
sqrt
(
1.
/
word_dim
),
is_static
=
True
)
std_0
=
paddle
.
attr
.
Param
(
initial_std
=
0.
)
std_default
=
paddle
.
attr
.
Param
(
initial_std
=
default_std
)
def
d_type
(
size
):
return
paddle
.
data_type
.
integer_value_sequence
(
size
)
def
ner_net
(
is_train
):
word
=
paddle
.
layer
.
data
(
name
=
'word'
,
type
=
d_type
(
word_dict_len
))
mark
=
paddle
.
layer
.
data
(
name
=
'mark'
,
type
=
d_type
(
mark_dict_len
))
word_embedding
=
paddle
.
layer
.
mixed
(
name
=
'word_embedding'
,
size
=
word_dim
,
input
=
paddle
.
layer
.
table_projection
(
input
=
word
,
param_attr
=
emb_para
))
mark_embedding
=
paddle
.
layer
.
mixed
(
name
=
'mark_embedding'
,
size
=
mark_dim
,
input
=
paddle
.
layer
.
table_projection
(
input
=
mark
,
param_attr
=
std_0
))
emb_layers
=
[
word_embedding
,
mark_embedding
]
word_caps_vector
=
paddle
.
layer
.
concat
(
name
=
'word_caps_vector'
,
input
=
emb_layers
)
hidden_1
=
paddle
.
layer
.
mixed
(
name
=
'hidden1'
,
size
=
hidden_dim
,
act
=
paddle
.
activation
.
Tanh
(),
bias_attr
=
std_default
,
input
=
[
paddle
.
layer
.
full_matrix_projection
(
input
=
word_caps_vector
,
param_attr
=
std_default
)
])
rnn_para_attr
=
paddle
.
attr
.
Param
(
initial_std
=
0.0
,
learning_rate
=
0.1
)
hidden_para_attr
=
paddle
.
attr
.
Param
(
initial_std
=
default_std
,
learning_rate
=
mix_hidden_lr
)
rnn_1_1
=
paddle
.
layer
.
recurrent
(
name
=
'rnn1-1'
,
input
=
hidden_1
,
act
=
paddle
.
activation
.
Relu
(),
bias_attr
=
std_0
,
param_attr
=
rnn_para_attr
)
rnn_1_2
=
paddle
.
layer
.
recurrent
(
name
=
'rnn1-2'
,
input
=
hidden_1
,
act
=
paddle
.
activation
.
Relu
(),
reverse
=
1
,
bias_attr
=
std_0
,
param_attr
=
rnn_para_attr
)
hidden_2_1
=
paddle
.
layer
.
mixed
(
name
=
'hidden2-1'
,
size
=
hidden_dim
,
bias_attr
=
std_default
,
act
=
paddle
.
activation
.
STanh
(),
input
=
[
paddle
.
layer
.
full_matrix_projection
(
input
=
hidden_1
,
param_attr
=
hidden_para_attr
),
paddle
.
layer
.
full_matrix_projection
(
input
=
rnn_1_1
,
param_attr
=
rnn_para_attr
)
])
hidden_2_2
=
paddle
.
layer
.
mixed
(
name
=
'hidden2-2'
,
size
=
hidden_dim
,
bias_attr
=
std_default
,
act
=
paddle
.
activation
.
STanh
(),
input
=
[
paddle
.
layer
.
full_matrix_projection
(
input
=
hidden_1
,
param_attr
=
hidden_para_attr
),
paddle
.
layer
.
full_matrix_projection
(
input
=
rnn_1_2
,
param_attr
=
rnn_para_attr
)
])
rnn_2_1
=
paddle
.
layer
.
recurrent
(
name
=
'rnn2-1'
,
input
=
hidden_2_1
,
act
=
paddle
.
activation
.
Relu
(),
reverse
=
1
,
bias_attr
=
std_0
,
param_attr
=
rnn_para_attr
)
rnn_2_2
=
paddle
.
layer
.
recurrent
(
name
=
'rnn2-2'
,
input
=
hidden_2_2
,
act
=
paddle
.
activation
.
Relu
(),
bias_attr
=
std_0
,
param_attr
=
rnn_para_attr
)
hidden_3
=
paddle
.
layer
.
mixed
(
name
=
'hidden3'
,
size
=
hidden_dim
,
bias_attr
=
std_default
,
act
=
paddle
.
activation
.
STanh
(),
input
=
[
paddle
.
layer
.
full_matrix_projection
(
input
=
hidden_2_1
,
param_attr
=
hidden_para_attr
),
paddle
.
layer
.
full_matrix_projection
(
input
=
rnn_2_1
,
param_attr
=
rnn_para_attr
),
paddle
.
layer
.
full_matrix_projection
(
input
=
hidden_2_2
,
param_attr
=
hidden_para_attr
),
paddle
.
layer
.
full_matrix_projection
(
input
=
rnn_2_2
,
param_attr
=
rnn_para_attr
)
])
output
=
paddle
.
layer
.
mixed
(
name
=
'output'
,
size
=
label_dict_len
,
bias_attr
=
False
,
input
=
[
paddle
.
layer
.
full_matrix_projection
(
input
=
hidden_3
,
param_attr
=
std_default
)
])
if
is_train
:
target
=
paddle
.
layer
.
data
(
name
=
'target'
,
type
=
d_type
(
label_dict_len
))
crf_cost
=
paddle
.
layer
.
crf
(
size
=
label_dict_len
,
input
=
output
,
label
=
target
,
param_attr
=
paddle
.
attr
.
Param
(
name
=
'crfw'
,
initial_std
=
default_std
,
learning_rate
=
mix_hidden_lr
))
crf_dec
=
paddle
.
layer
.
crf_decoding
(
size
=
label_dict_len
,
input
=
output
,
label
=
target
,
param_attr
=
paddle
.
attr
.
Param
(
name
=
'crfw'
))
return
crf_cost
,
crf_dec
,
target
else
:
predict
=
paddle
.
layer
.
crf_decoding
(
size
=
label_dict_len
,
input
=
output
,
param_attr
=
paddle
.
attr
.
Param
(
name
=
'crfw'
))
return
predict
def
ner_net_train
(
data_reader
=
train_data_reader
,
num_passes
=
1
):
# define network topology
crf_cost
,
crf_dec
,
target
=
ner_net
(
is_train
=
True
)
evaluator
.
sum
(
name
=
'error'
,
input
=
crf_dec
)
evaluator
.
chunk
(
name
=
'ner_chunk'
,
input
=
crf_dec
,
label
=
target
,
chunk_scheme
=
'IOB'
,
num_chunk_types
=
(
label_dict_len
-
1
)
/
2
)
# create parameters
parameters
=
paddle
.
parameters
.
create
(
crf_cost
)
parameters
.
set
(
'emb'
,
word_vector_values
)
# create optimizer
optimizer
=
paddle
.
optimizer
.
Momentum
(
momentum
=
0
,
learning_rate
=
2e-4
,
regularization
=
paddle
.
optimizer
.
L2Regularization
(
rate
=
8e-4
),
gradient_clipping_threshold
=
25
,
model_average
=
paddle
.
optimizer
.
ModelAverage
(
average_window
=
0.5
,
max_average_window
=
10000
),
)
trainer
=
paddle
.
trainer
.
SGD
(
cost
=
crf_cost
,
parameters
=
parameters
,
update_equation
=
optimizer
,
extra_layers
=
crf_dec
)
reader
=
paddle
.
batch
(
paddle
.
reader
.
shuffle
(
data_reader
,
buf_size
=
8192
),
batch_size
=
64
)
feeding
=
{
'word'
:
0
,
'mark'
:
1
,
'target'
:
2
}
def
event_handler
(
event
):
if
isinstance
(
event
,
paddle
.
event
.
EndIteration
):
if
event
.
batch_id
%
100
==
0
:
print
"Pass %d, Batch %d, Cost %f, %s"
%
(
event
.
pass_id
,
event
.
batch_id
,
event
.
cost
,
event
.
metrics
)
if
event
.
batch_id
%
1000
==
0
:
result
=
trainer
.
test
(
reader
=
reader
,
feeding
=
feeding
)
print
"
\n
Test with Pass %d, Batch %d, %s"
%
(
event
.
pass_id
,
event
.
batch_id
,
result
.
metrics
)
if
isinstance
(
event
,
paddle
.
event
.
EndPass
):
# save parameters
with
gzip
.
open
(
'params_pass_%d.tar.gz'
%
event
.
pass_id
,
'w'
)
as
f
:
parameters
.
to_tar
(
f
)
result
=
trainer
.
test
(
reader
=
reader
,
feeding
=
feeding
)
print
"
\n
Test with Pass %d, %s"
%
(
event
.
pass_id
,
result
.
metrics
)
trainer
.
train
(
reader
=
reader
,
event_handler
=
event_handler
,
num_passes
=
num_passes
,
feeding
=
feeding
)
return
parameters
def
ner_net_infer
(
data_reader
=
test_data_reader
,
model_file
=
'ner_model.tar.gz'
):
test_data
=
[]
test_sentences
=
[]
for
item
in
data_reader
():
test_data
.
append
([
item
[
0
],
item
[
1
]])
test_sentences
.
append
(
item
[
-
1
])
if
len
(
test_data
)
==
10
:
break
predict
=
ner_net
(
is_train
=
False
)
lab_ids
=
paddle
.
infer
(
output_layer
=
predict
,
parameters
=
paddle
.
parameters
.
Parameters
.
from_tar
(
gzip
.
open
(
model_file
)),
input
=
test_data
,
field
=
'id'
)
flat_data
=
[
word
for
word
in
itertools
.
chain
.
from_iterable
(
test_sentences
)]
labels_reverse
=
{}
for
(
k
,
v
)
in
label_dict
.
items
():
labels_reverse
[
v
]
=
k
pre_lab
=
[
labels_reverse
[
lab_id
]
for
lab_id
in
lab_ids
]
for
word
,
label
in
zip
(
flat_data
,
pre_lab
):
print
word
,
label
if
__name__
==
'__main__'
:
paddle
.
init
(
use_gpu
=
False
,
trainer_count
=
1
)
ner_net_train
(
data_reader
=
train_data_reader
,
num_passes
=
1
)
ner_net_infer
(
data_reader
=
test_data_reader
,
model_file
=
'params_pass_0.tar.gz'
)
sequence_tagging_for_ner/network_conf.py
0 → 100644
浏览文件 @
132a26af
import
math
import
paddle.v2
as
paddle
import
paddle.v2.evaluator
as
evaluator
def
stacked_rnn
(
input_layer
,
hidden_size
,
hidden_para_attr
,
rnn_para_attr
,
stack_num
=
3
,
reverse
=
False
):
for
i
in
range
(
stack_num
):
hidden
=
paddle
.
layer
.
fc
(
size
=
hidden_size
,
act
=
paddle
.
activation
.
Tanh
(),
bias_attr
=
paddle
.
attr
.
Param
(
initial_std
=
1.
),
input
=
[
input_layer
]
if
not
i
else
[
hidden
,
rnn
],
param_attr
=
[
rnn_para_attr
]
if
not
i
else
[
hidden_para_attr
,
rnn_para_attr
])
rnn
=
paddle
.
layer
.
recurrent
(
input
=
hidden
,
act
=
paddle
.
activation
.
Relu
(),
bias_attr
=
paddle
.
attr
.
Param
(
initial_std
=
1.
),
reverse
=
reverse
,
param_attr
=
rnn_para_attr
)
return
hidden
,
rnn
def
ner_net
(
word_dict_len
,
label_dict_len
,
stack_num
=
3
,
is_train
=
True
):
mark_dict_len
=
2
word_dim
=
50
mark_dim
=
5
hidden_dim
=
128
word
=
paddle
.
layer
.
data
(
name
=
'word'
,
type
=
paddle
.
data_type
.
integer_value_sequence
(
word_dict_len
))
word_embedding
=
paddle
.
layer
.
embedding
(
input
=
word
,
size
=
word_dim
,
param_attr
=
paddle
.
attr
.
Param
(
name
=
'emb'
,
initial_std
=
math
.
sqrt
(
1.
/
word_dim
),
is_static
=
True
))
mark
=
paddle
.
layer
.
data
(
name
=
'mark'
,
type
=
paddle
.
data_type
.
integer_value_sequence
(
mark_dict_len
))
mark_embedding
=
paddle
.
layer
.
embedding
(
input
=
mark
,
size
=
mark_dim
,
param_attr
=
paddle
.
attr
.
Param
(
initial_std
=
math
.
sqrt
(
1.
/
word_dim
)))
emb_layers
=
[
word_embedding
,
mark_embedding
]
word_caps_vector
=
paddle
.
layer
.
concat
(
input
=
emb_layers
)
mix_hidden_lr
=
1e-3
rnn_para_attr
=
paddle
.
attr
.
Param
(
initial_std
=
0.0
,
learning_rate
=
0.1
)
hidden_para_attr
=
paddle
.
attr
.
Param
(
initial_std
=
1
/
math
.
sqrt
(
hidden_dim
),
learning_rate
=
mix_hidden_lr
)
forward_hidden
,
rnn_forward
=
stacked_rnn
(
word_caps_vector
,
hidden_dim
,
hidden_para_attr
,
rnn_para_attr
)
backward_hidden
,
rnn_backward
=
stacked_rnn
(
word_caps_vector
,
hidden_dim
,
hidden_para_attr
,
rnn_para_attr
,
reverse
=
True
)
fea
=
paddle
.
layer
.
fc
(
size
=
hidden_dim
,
bias_attr
=
paddle
.
attr
.
Param
(
initial_std
=
1.
),
act
=
paddle
.
activation
.
STanh
(),
input
=
[
forward_hidden
,
rnn_forward
,
backward_hidden
,
rnn_backward
],
param_attr
=
[
hidden_para_attr
,
rnn_para_attr
,
hidden_para_attr
,
rnn_para_attr
])
emission
=
paddle
.
layer
.
fc
(
size
=
label_dict_len
,
bias_attr
=
False
,
input
=
fea
,
param_attr
=
rnn_para_attr
)
if
is_train
:
target
=
paddle
.
layer
.
data
(
name
=
'target'
,
type
=
paddle
.
data_type
.
integer_value_sequence
(
label_dict_len
))
crf
=
paddle
.
layer
.
crf
(
size
=
label_dict_len
,
input
=
emission
,
label
=
target
,
param_attr
=
paddle
.
attr
.
Param
(
name
=
'crfw'
,
initial_std
=
1e-3
))
crf_dec
=
paddle
.
layer
.
crf_decoding
(
size
=
label_dict_len
,
input
=
emission
,
label
=
target
,
param_attr
=
paddle
.
attr
.
Param
(
name
=
'crfw'
))
return
crf
,
crf_dec
,
target
else
:
predict
=
paddle
.
layer
.
crf_decoding
(
size
=
label_dict_len
,
input
=
emission
,
param_attr
=
paddle
.
attr
.
Param
(
name
=
'crfw'
))
return
predict
sequence_tagging_for_ner/
conll03
.py
→
sequence_tagging_for_ner/
reader
.py
浏览文件 @
132a26af
...
@@ -2,16 +2,9 @@
...
@@ -2,16 +2,9 @@
Conll03 dataset.
Conll03 dataset.
"""
"""
import
tarfile
from
utils
import
*
import
gzip
import
itertools
import
collections
import
re
import
numpy
as
np
__all__
=
[
'train'
,
'test'
,
'get_dict'
,
'get_embedding'
]
__all__
=
[
"data_reader"
]
UNK_IDX
=
0
def
canonicalize_digits
(
word
):
def
canonicalize_digits
(
word
):
...
@@ -28,96 +21,48 @@ def canonicalize_word(word, wordset=None, digits=True):
...
@@ -28,96 +21,48 @@ def canonicalize_word(word, wordset=None, digits=True):
if
(
wordset
!=
None
)
and
(
word
in
wordset
):
return
word
if
(
wordset
!=
None
)
and
(
word
in
wordset
):
return
word
word
=
canonicalize_digits
(
word
)
# try to canonicalize numbers
word
=
canonicalize_digits
(
word
)
# try to canonicalize numbers
if
(
wordset
==
None
)
or
(
word
in
wordset
):
return
word
if
(
wordset
==
None
)
or
(
word
in
wordset
):
return
word
else
:
return
"UUUNKKK"
# unknown token
else
:
return
"<UNK>"
# unknown token
def
load_dict
(
filename
):
d
=
dict
()
with
open
(
filename
,
'r'
)
as
f
:
for
i
,
line
in
enumerate
(
f
):
d
[
line
.
strip
()]
=
i
return
d
def
get_dict
(
vocab_file
=
'data/vocab.txt'
,
target_file
=
'data/target.txt'
):
def
data_reader
(
data_file
,
word_dict
,
label_dict
):
"""
"""
Get the word and label dictionary.
Conll03 train set creator.
"""
word_dict
=
load_dict
(
vocab_file
)
label_dict
=
load_dict
(
target_file
)
return
word_dict
,
label_dict
The dataset can be obtained according to http://www.clips.uantwerpen.be/conll2003/ner/.
It returns a reader creator, each sample in the reader includes:
word id sequence, label id sequence and raw sentence.
def
get_embedding
(
emb_file
=
'data/wordVectors.txt'
):
:return: reader creator
"""
:rtype: callable
Get the trained word vector.
"""
"""
return
np
.
loadtxt
(
emb_file
,
dtype
=
float
)
def
corpus_reader
(
filename
=
'data/train'
):
def
reader
():
def
reader
():
UNK_IDX
=
word_dict
[
"<UNK>"
]
sentence
=
[]
sentence
=
[]
labels
=
[]
labels
=
[]
with
open
(
filename
)
as
f
:
with
open
(
data_file
,
"r"
)
as
f
:
for
line
in
f
:
for
line
in
f
:
if
re
.
match
(
r
"-DOCSTART-.+"
,
line
)
or
(
len
(
line
.
strip
())
==
0
)
:
if
len
(
line
.
strip
())
==
0
:
if
len
(
sentence
)
>
0
:
if
len
(
sentence
)
>
0
:
yield
sentence
,
labels
word_idx
=
[
word_dict
.
get
(
canonicalize_word
(
w
,
word_dict
),
UNK_IDX
)
for
w
in
sentence
]
mark
=
[
1
if
w
[
0
].
isupper
()
else
0
for
w
in
sentence
]
label_idx
=
[
label_dict
[
l
]
for
l
in
labels
]
yield
word_idx
,
mark
,
label_idx
sentence
=
[]
sentence
=
[]
labels
=
[]
labels
=
[]
else
:
else
:
segs
=
line
.
strip
().
split
()
segs
=
line
.
strip
().
split
()
sentence
.
append
(
segs
[
0
])
sentence
.
append
(
segs
[
0
])
# transform
from
I-TYPE to BIO schema
# transform I-TYPE to BIO schema
if
segs
[
-
1
]
!=
'O'
and
(
len
(
labels
)
==
0
or
if
segs
[
-
1
]
!=
"O"
and
(
len
(
labels
)
==
0
or
labels
[
-
1
][
1
:]
!=
segs
[
-
1
][
1
:]):
labels
[
-
1
][
1
:]
!=
segs
[
-
1
][
1
:]):
labels
.
append
(
'B'
+
segs
[
-
1
][
1
:])
labels
.
append
(
"B"
+
segs
[
-
1
][
1
:])
else
:
else
:
labels
.
append
(
segs
[
-
1
])
labels
.
append
(
segs
[
-
1
])
f
.
close
()
return
reader
def
reader_creator
(
corpus_reader
,
word_dict
,
label_dict
):
"""
Conll03 train set creator.
The dataset can be obtained according to http://www.clips.uantwerpen.be/conll2003/ner/.
It returns a reader creator, each sample in the reader includes word id sequence, label id sequence and raw sentence for purpose of print.
:return: Training reader creator
:rtype: callable
"""
def
reader
():
for
sentence
,
labels
in
corpus_reader
():
word_idx
=
[
word_dict
.
get
(
canonicalize_word
(
w
,
word_dict
),
UNK_IDX
)
for
w
in
sentence
]
mark
=
[
1
if
w
[
0
].
isupper
()
else
0
for
w
in
sentence
]
label_idx
=
[
label_dict
.
get
(
w
)
for
w
in
labels
]
yield
word_idx
,
mark
,
label_idx
,
sentence
return
reader
return
reader
def
train
(
data_file
=
'data/train'
,
vocab_file
=
'data/vocab.txt'
,
target_file
=
'data/target.txt'
):
return
reader_creator
(
corpus_reader
(
data_file
),
word_dict
=
load_dict
(
vocab_file
),
label_dict
=
load_dict
(
target_file
))
def
test
(
data_file
=
'data/test'
,
vocab_file
=
'data/vocab.txt'
,
target_file
=
'data/target.txt'
):
return
reader_creator
(
corpus_reader
(
data_file
),
word_dict
=
load_dict
(
vocab_file
),
label_dict
=
load_dict
(
target_file
))
sequence_tagging_for_ner/train.py
0 → 100644
浏览文件 @
132a26af
import
gzip
import
numpy
as
np
import
reader
from
utils
import
*
from
network_conf
import
*
def
main
(
train_data_file
,
test_data_file
,
vocab_file
,
target_file
,
emb_file
,
num_passes
=
10
,
batch_size
=
32
):
word_dict
=
load_dict
(
vocab_file
)
label_dict
=
load_dict
(
target_file
)
word_vector_values
=
get_embedding
(
emb_file
)
word_dict_len
=
len
(
word_dict
)
label_dict_len
=
len
(
label_dict
)
paddle
.
init
(
use_gpu
=
False
,
trainer_count
=
1
)
# define network topology
crf_cost
,
crf_dec
,
target
=
ner_net
(
word_dict_len
,
label_dict_len
)
evaluator
.
sum
(
name
=
"error"
,
input
=
crf_dec
)
evaluator
.
chunk
(
name
=
"ner_chunk"
,
input
=
crf_dec
,
label
=
target
,
chunk_scheme
=
"IOB"
,
num_chunk_types
=
(
label_dict_len
-
1
)
/
2
)
# create parameters
parameters
=
paddle
.
parameters
.
create
(
crf_cost
)
parameters
.
set
(
"emb"
,
word_vector_values
)
# create optimizer
optimizer
=
paddle
.
optimizer
.
Momentum
(
momentum
=
0
,
learning_rate
=
2e-4
,
regularization
=
paddle
.
optimizer
.
L2Regularization
(
rate
=
8e-4
),
gradient_clipping_threshold
=
25
,
model_average
=
paddle
.
optimizer
.
ModelAverage
(
average_window
=
0.5
,
max_average_window
=
10000
),
)
trainer
=
paddle
.
trainer
.
SGD
(
cost
=
crf_cost
,
parameters
=
parameters
,
update_equation
=
optimizer
,
extra_layers
=
crf_dec
)
train_reader
=
paddle
.
batch
(
paddle
.
reader
.
shuffle
(
reader
.
data_reader
(
train_data_file
,
word_dict
,
label_dict
),
buf_size
=
1000
),
batch_size
=
batch_size
)
test_reader
=
paddle
.
batch
(
paddle
.
reader
.
shuffle
(
reader
.
data_reader
(
test_data_file
,
word_dict
,
label_dict
),
buf_size
=
1000
),
batch_size
=
batch_size
)
feeding
=
{
"word"
:
0
,
"mark"
:
1
,
"target"
:
2
}
def
event_handler
(
event
):
if
isinstance
(
event
,
paddle
.
event
.
EndIteration
):
if
event
.
batch_id
%
1
==
0
:
logger
.
info
(
"Pass %d, Batch %d, Cost %f, %s"
%
(
event
.
pass_id
,
event
.
batch_id
,
event
.
cost
,
event
.
metrics
))
if
event
.
batch_id
%
1
==
0
:
result
=
trainer
.
test
(
reader
=
test_reader
,
feeding
=
feeding
)
logger
.
info
(
"
\n
Test with Pass %d, Batch %d, %s"
%
(
event
.
pass_id
,
event
.
batch_id
,
result
.
metrics
))
if
isinstance
(
event
,
paddle
.
event
.
EndPass
):
# save parameters
with
gzip
.
open
(
"models/params_pass_%d.tar.gz"
%
event
.
pass_id
,
"w"
)
as
f
:
parameters
.
to_tar
(
f
)
result
=
trainer
.
test
(
reader
=
test_reader
,
feeding
=
feeding
)
logger
.
info
(
"
\n
Test with Pass %d, %s"
%
(
event
.
pass_id
,
result
.
metrics
))
trainer
.
train
(
reader
=
train_reader
,
event_handler
=
event_handler
,
num_passes
=
num_passes
,
feeding
=
feeding
)
if
__name__
==
"__main__"
:
main
(
train_data_file
=
'data/train'
,
test_data_file
=
'data/test'
,
vocab_file
=
'data/vocab.txt'
,
target_file
=
'data/target.txt'
,
emb_file
=
'data/wordVectors.txt'
)
sequence_tagging_for_ner/utils.py
0 → 100644
浏览文件 @
132a26af
#!/usr/bin/env python
# -*- coding: utf-8 -*-
import
logging
import
os
import
re
import
argparse
import
numpy
as
np
from
collections
import
defaultdict
logger
=
logging
.
getLogger
(
"logger"
)
logger
.
setLevel
(
logging
.
INFO
)
def
get_embedding
(
emb_file
=
'data/wordVectors.txt'
):
"""
Get the trained word vector.
"""
return
np
.
loadtxt
(
emb_file
,
dtype
=
float
)
def
load_dict
(
dict_path
):
return
dict
((
line
.
strip
().
split
(
"
\t
"
)[
0
],
idx
)
for
idx
,
line
in
enumerate
(
open
(
dict_path
,
"r"
).
readlines
()))
def
load_reverse_dict
(
dict_path
):
return
dict
((
idx
,
line
.
strip
().
split
(
"
\t
"
)[
0
])
for
idx
,
line
in
enumerate
(
open
(
dict_path
,
"r"
).
readlines
()))
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