Skip to content
体验新版
项目
组织
正在加载...
登录
切换导航
打开侧边栏
PaddlePaddle
PaddleDetection
提交
c5619bbc
P
PaddleDetection
项目概览
PaddlePaddle
/
PaddleDetection
1 年多 前同步成功
通知
696
Star
11112
Fork
2696
代码
文件
提交
分支
Tags
贡献者
分支图
Diff
Issue
184
列表
看板
标记
里程碑
合并请求
40
Wiki
0
Wiki
分析
仓库
DevOps
项目成员
Pages
P
PaddleDetection
项目概览
项目概览
详情
发布
仓库
仓库
文件
提交
分支
标签
贡献者
分支图
比较
Issue
184
Issue
184
列表
看板
标记
里程碑
合并请求
40
合并请求
40
Pages
分析
分析
仓库分析
DevOps
Wiki
0
Wiki
成员
成员
收起侧边栏
关闭侧边栏
动态
分支图
创建新Issue
提交
Issue看板
未验证
提交
c5619bbc
编写于
7月 16, 2018
作者:
W
Wu Yi
提交者:
GitHub
7月 16, 2018
浏览文件
操作
浏览文件
下载
电子邮件补丁
差异文件
fix auc op (#12087)
* fix auc * update * update * fix compile * fix param name * add doc string * fix test
上级
f02a4da6
变更
4
隐藏空白更改
内联
并排
Showing
4 changed file
with
75 addition
and
23 deletion
+75
-23
paddle/fluid/operators/auc_op.cc
paddle/fluid/operators/auc_op.cc
+15
-0
paddle/fluid/operators/auc_op.h
paddle/fluid/operators/auc_op.h
+14
-17
python/paddle/fluid/layers/metric_op.py
python/paddle/fluid/layers/metric_op.py
+25
-4
python/paddle/fluid/tests/unittests/test_auc_op.py
python/paddle/fluid/tests/unittests/test_auc_op.py
+21
-2
未找到文件。
paddle/fluid/operators/auc_op.cc
浏览文件 @
c5619bbc
...
...
@@ -35,7 +35,14 @@ class AucOp : public framework::OperatorWithKernel {
PADDLE_ENFORCE_EQ
(
inference_height
,
label_height
,
"Out and Label should have same height."
);
int
num_thres
=
ctx
->
Attrs
().
Get
<
int
>
(
"num_thresholds"
);
ctx
->
SetOutputDim
(
"AUC"
,
{
1
});
ctx
->
SetOutputDim
(
"TPOut"
,
{
num_thres
});
ctx
->
SetOutputDim
(
"TNOut"
,
{
num_thres
});
ctx
->
SetOutputDim
(
"FPOut"
,
{
num_thres
});
ctx
->
SetOutputDim
(
"FNOut"
,
{
num_thres
});
ctx
->
ShareLoD
(
"Out"
,
/*->*/
"AUC"
);
}
...
...
@@ -63,10 +70,18 @@ class AucOpMaker : public framework::OpProtoAndCheckerMaker {
AddInput
(
"Label"
,
"A 2D int tensor indicating the label of the training data."
"The height is batch size and width is always 1."
);
AddInput
(
"TP"
,
"True-Positive value."
);
AddInput
(
"FP"
,
"False-Positive value."
);
AddInput
(
"TN"
,
"True-Negative value."
);
AddInput
(
"FN"
,
"False-Negative value."
);
// TODO(typhoonzero): support weight input
AddOutput
(
"AUC"
,
"A scalar representing the "
"current area-under-the-curve."
);
AddOutput
(
"TPOut"
,
"True-Positive value."
);
AddOutput
(
"FPOut"
,
"False-Positive value."
);
AddOutput
(
"TNOut"
,
"True-Negative value."
);
AddOutput
(
"FNOut"
,
"False-Negative value."
);
AddAttr
<
std
::
string
>
(
"curve"
,
"Curve type, can be 'ROC' or 'PR'."
)
.
SetDefault
(
"ROC"
);
...
...
paddle/fluid/operators/auc_op.h
浏览文件 @
c5619bbc
...
...
@@ -34,6 +34,12 @@ class AucKernel : public framework::OpKernel<T> {
auto
*
inference
=
ctx
.
Input
<
Tensor
>
(
"Out"
);
auto
*
label
=
ctx
.
Input
<
Tensor
>
(
"Label"
);
auto
*
auc
=
ctx
.
Output
<
Tensor
>
(
"AUC"
);
// Only use output var for now, make sure it's persistable and
// not cleaned up for each batch.
auto
*
true_positive
=
ctx
.
Output
<
Tensor
>
(
"TPOut"
);
auto
*
false_positive
=
ctx
.
Output
<
Tensor
>
(
"FPOut"
);
auto
*
true_negative
=
ctx
.
Output
<
Tensor
>
(
"TNOut"
);
auto
*
false_negative
=
ctx
.
Output
<
Tensor
>
(
"FNOut"
);
float
*
auc_data
=
auc
->
mutable_data
<
float
>
(
ctx
.
GetPlace
());
...
...
@@ -54,19 +60,10 @@ class AucKernel : public framework::OpKernel<T> {
const
T
*
inference_data
=
inference
->
data
<
T
>
();
const
int64_t
*
label_data
=
label
->
data
<
int64_t
>
();
// Create local tensor for storing the curve: TP, FN, TN, FP
// TODO(typhoonzero): use eigen op to caculate these values.
Tensor
true_positive
,
false_positive
,
true_negative
,
false_negative
;
true_positive
.
Resize
({
num_thresholds
});
false_negative
.
Resize
({
num_thresholds
});
true_negative
.
Resize
({
num_thresholds
});
false_positive
.
Resize
({
num_thresholds
});
int64_t
*
tp_data
=
true_positive
.
mutable_data
<
int64_t
>
(
ctx
.
GetPlace
());
int64_t
*
fn_data
=
false_negative
.
mutable_data
<
int64_t
>
(
ctx
.
GetPlace
());
int64_t
*
tn_data
=
true_negative
.
mutable_data
<
int64_t
>
(
ctx
.
GetPlace
());
int64_t
*
fp_data
=
false_positive
.
mutable_data
<
int64_t
>
(
ctx
.
GetPlace
());
auto
*
tp_data
=
true_positive
->
mutable_data
<
int64_t
>
(
ctx
.
GetPlace
());
auto
*
fn_data
=
false_negative
->
mutable_data
<
int64_t
>
(
ctx
.
GetPlace
());
auto
*
tn_data
=
true_negative
->
mutable_data
<
int64_t
>
(
ctx
.
GetPlace
());
auto
*
fp_data
=
false_positive
->
mutable_data
<
int64_t
>
(
ctx
.
GetPlace
());
for
(
int
idx_thresh
=
0
;
idx_thresh
<
num_thresholds
;
idx_thresh
++
)
{
// caculate TP, FN, TN, FP for current thresh
...
...
@@ -91,10 +88,10 @@ class AucKernel : public framework::OpKernel<T> {
}
}
// store rates
tp_data
[
idx_thresh
]
=
tp
;
fn_data
[
idx_thresh
]
=
fn
;
tn_data
[
idx_thresh
]
=
tn
;
fp_data
[
idx_thresh
]
=
fp
;
tp_data
[
idx_thresh
]
+
=
tp
;
fn_data
[
idx_thresh
]
+
=
fn
;
tn_data
[
idx_thresh
]
+
=
tn
;
fp_data
[
idx_thresh
]
+
=
fp
;
}
// epsilon to avoid divide by zero.
float
epsilon
=
1e-6
;
...
...
python/paddle/fluid/layers/metric_op.py
浏览文件 @
c5619bbc
...
...
@@ -76,7 +76,7 @@ def accuracy(input, label, k=1, correct=None, total=None):
return
acc_out
def
auc
(
input
,
label
,
curve
=
'ROC'
,
num_thresholds
=
200
):
def
auc
(
input
,
label
,
curve
=
'ROC'
,
num_thresholds
=
200
,
topk
=
1
):
"""
**Area Under the Curve (AUC) Layer**
...
...
@@ -102,6 +102,7 @@ def auc(input, label, curve='ROC', num_thresholds=200):
curve(str): Curve type, can be 'ROC' or 'PR'. Default 'ROC'.
num_thresholds(int): The number of thresholds to use when discretizing
the roc curve. Default 200.
topk(int): only topk number of prediction output will be used for auc.
Returns:
Variable: A scalar representing the current AUC.
...
...
@@ -115,7 +116,7 @@ def auc(input, label, curve='ROC', num_thresholds=200):
"""
warnings
.
warn
(
"This interface not recommended, fluid.layers.auc compute the auc at every minibatch,
\
"This interface
is
not recommended, fluid.layers.auc compute the auc at every minibatch,
\
but can not aggregate them and get the pass AUC, because pass
\
auc can not be averaged with weighted from the minibatch auc value.
\
Please use fluid.metrics.Auc, it can compute the auc value via Python natively,
\
...
...
@@ -125,14 +126,34 @@ def auc(input, label, curve='ROC', num_thresholds=200):
topk_indices
=
helper
.
create_tmp_variable
(
dtype
=
"int64"
)
topk_out
,
topk_indices
=
nn
.
topk
(
input
,
k
=
k
)
auc_out
=
helper
.
create_tmp_variable
(
dtype
=
"float32"
)
# make tp, tn, fp, fn persistable, so that can accumulate all batches.
tp
=
helper
.
create_global_variable
(
persistable
=
True
)
tn
=
helper
.
create_global_variable
(
persistable
=
True
)
fp
=
helper
.
create_global_variable
(
persistable
=
True
)
fn
=
helper
.
create_global_variable
(
persistable
=
True
)
for
var
in
[
tp
,
tn
,
fp
,
fn
]:
helper
.
set_variable_initializer
(
var
,
Constant
(
value
=
0.0
,
force_cpu
=
True
))
helper
.
append_op
(
type
=
"auc"
,
inputs
=
{
"Out"
:
[
topk_out
],
"Indices"
:
[
topk_indices
],
"Label"
:
[
label
]
"Label"
:
[
label
],
"TP"
:
[
tp
],
"TN"
:
[
tn
],
"FP"
:
[
fp
],
"FN"
:
[
fn
]
},
attrs
=
{
"curve"
:
curve
,
"num_thresholds"
:
num_thresholds
},
outputs
=
{
"AUC"
:
[
auc_out
],
})
outputs
=
{
"AUC"
:
[
auc_out
],
"TPOut"
:
[
tp
],
"TNOut"
:
[
tn
],
"FPOut"
:
[
fp
],
"FNOut"
:
[
fn
]
})
return
auc_out
python/paddle/fluid/tests/unittests/test_auc_op.py
浏览文件 @
c5619bbc
...
...
@@ -24,7 +24,20 @@ class TestAucOp(OpTest):
indices
=
np
.
random
.
randint
(
0
,
2
,
(
128
,
2
))
labels
=
np
.
random
.
randint
(
0
,
2
,
(
128
,
1
))
num_thresholds
=
200
self
.
inputs
=
{
'Out'
:
pred
,
'Indices'
:
indices
,
'Label'
:
labels
}
tp
=
np
.
zeros
((
num_thresholds
,
)).
astype
(
"int64"
)
tn
=
np
.
zeros
((
num_thresholds
,
)).
astype
(
"int64"
)
fp
=
np
.
zeros
((
num_thresholds
,
)).
astype
(
"int64"
)
fn
=
np
.
zeros
((
num_thresholds
,
)).
astype
(
"int64"
)
self
.
inputs
=
{
'Out'
:
pred
,
'Indices'
:
indices
,
'Label'
:
labels
,
'TP'
:
tp
,
'TN'
:
tn
,
'FP'
:
fp
,
'FN'
:
fn
}
self
.
attrs
=
{
'curve'
:
'ROC'
,
'num_thresholds'
:
num_thresholds
}
# NOTE: sklearn use a different way to generate thresholds
# which will cause the result differs slightly:
...
...
@@ -71,7 +84,13 @@ class TestAucOp(OpTest):
y
=
(
tpr
[:
num_thresholds
-
1
]
+
tpr
[
1
:])
/
2.0
auc_value
=
np
.
sum
(
x
*
y
)
self
.
outputs
=
{
'AUC'
:
auc_value
}
self
.
outputs
=
{
'AUC'
:
auc_value
,
'TPOut'
:
tp_list
,
'FNOut'
:
fn_list
,
'TNOut'
:
tn_list
,
'FPOut'
:
fp_list
}
def
test_check_output
(
self
):
self
.
check_output
()
...
...
编辑
预览
Markdown
is supported
0%
请重试
或
添加新附件
.
添加附件
取消
You are about to add
0
people
to the discussion. Proceed with caution.
先完成此消息的编辑!
取消
想要评论请
注册
或
登录