Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into initialize

Merge branch develop

benchmark/tensorflow/mnist.py

+#   Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from __future__ import absolute_import
+from __future__ import division
+from __future__ import print_function
+
+import argparse
+import time
+import numpy as np
+
+import tensorflow as tf
+import paddle.v2 as paddle
+
+DTYPE = tf.float32
+
+
+def parse_args():
+    parser = argparse.ArgumentParser("mnist model benchmark.")
+    parser.add_argument(
+        '--batch_size', type=int, default=128, help='The minibatch size.')
+    parser.add_argument(
+        '--iterations', type=int, default=35, help='The number of minibatches.')
+    parser.add_argument(
+        '--pass_num', type=int, default=5, help='The number of passes.')
+    parser.add_argument(
+        '--device',
+        type=str,
+        default='GPU',
+        choices=['CPU', 'GPU'],
+        help='The device type.')
+    args = parser.parse_args()
+    return args
+
+
+def run_benchmark(args):
+    def weight_variable(dtype, shape):
+        initial = tf.truncated_normal(shape, stddev=0.1, dtype=dtype)
+        return tf.Variable(initial)
+
+    def bias_variable(dtype, shape):
+        initial = tf.constant(0.1, shape=shape, dtype=dtype)
+        return tf.Variable(initial)
+
+    device = '/cpu:0' if args.device == 'CPU' else '/device:GPU:0'
+    with tf.device(device):
+        images = tf.placeholder(DTYPE, shape=(None, 28, 28, 1))
+        labels = tf.placeholder(tf.int64, shape=(None, ))
+
+        # conv1, relu, pool1
+        conv1_weights = weight_variable(DTYPE, [5, 5, 1, 20])
+        conv1_bias = bias_variable(DTYPE, [20])
+        conv1 = tf.nn.conv2d(
+            images, conv1_weights, strides=[1, 1, 1, 1], padding="VALID")
+        relu1 = tf.nn.relu(tf.nn.bias_add(conv1, conv1_bias))
+        pool1 = tf.nn.max_pool(
+            relu1, ksize=[1, 2, 2, 1], strides=[1, 2, 2, 1], padding="VALID")
+
+        # conv2, relu, pool2
+        conv2_weights = weight_variable(DTYPE, [5, 5, 20, 50])
+        conv2_bias = bias_variable(DTYPE, [50])
+        conv2 = tf.nn.conv2d(
+            pool1, conv2_weights, strides=[1, 1, 1, 1], padding="VALID")
+        relu2 = tf.nn.relu(tf.nn.bias_add(conv2, conv2_bias))
+        pool2 = tf.nn.max_pool(
+            relu2, ksize=[1, 2, 2, 1], strides=[1, 2, 2, 1], padding="VALID")
+
+        # FC 
+        pool_shape = pool2.get_shape().as_list()
+        hidden_dim = reduce(lambda a, b: a * b, pool_shape[1:], 1)
+        reshape = tf.reshape(pool2, shape=(tf.shape(pool2)[0], hidden_dim))
+        fc_weights = weight_variable(DTYPE, [hidden_dim, 10])
+        fc_bias = bias_variable(DTYPE, [10])
+        logits = tf.matmul(reshape, fc_weights) + fc_bias
+
+        # Get prediction
+        prediction = tf.nn.softmax(logits)
+
+        # Loss 
+        one_hot_labels = tf.one_hot(labels, depth=10)
+        cost = -tf.reduce_sum(tf.log(prediction) * one_hot_labels, [1])
+        avg_cost = tf.reduce_mean(cost)
+
+        # Get accuracy
+        correct = tf.equal(tf.argmax(prediction, 1), labels)
+        accuracy = tf.reduce_mean(tf.cast(correct, tf.float32))
+
+        # metrics, g_accuracy
+        with tf.variable_scope("reset_metrics_accuracy_scope") as scope:
+            g_accuracy = tf.metrics.accuracy(
+                labels, tf.argmax(
+                    prediction, axis=1))
+            vars = tf.contrib.framework.get_variables(
+                scope, collection=tf.GraphKeys.LOCAL_VARIABLES)
+            g_accuracy_reset_op = tf.variables_initializer(vars)
+
+        # Optimizer 
+        opt = tf.train.AdamOptimizer(
+            learning_rate=0.001, beta1=0.9, beta2=0.999)
+        train_op = opt.minimize(avg_cost)
+        # train_op = tf.train.AdamOptimizer(1e-4).minimize(avg_cost)
+
+    train_reader = paddle.batch(
+        paddle.dataset.mnist.train(), batch_size=args.batch_size)
+    test_reader = paddle.batch(
+        paddle.dataset.mnist.test(), batch_size=args.batch_size)
+
+    def eval_test():
+        sess.run(g_accuracy_reset_op)
+        for batch_id, data in enumerate(test_reader()):
+            images_data = np.array(
+                map(lambda x: np.transpose(x[0].reshape([1, 28, 28]), axes=[1,2,0]), data)).astype("float32")
+            labels_data = np.array(map(lambda x: x[1], data)).astype("int64")
+
+            loss, acc, g_acc = sess.run(
+                [avg_cost, accuracy, g_accuracy],
+                feed_dict={images: images_data,
+                           labels: labels_data})
+        return g_acc[1]
+
+    config = tf.ConfigProto(
+        intra_op_parallelism_threads=1, inter_op_parallelism_threads=1)
+    config.gpu_options.allow_growth = True
+
+    with tf.Session(config=config) as sess:
+        init_g = tf.global_variables_initializer()
+        init_l = tf.local_variables_initializer()
+        sess.run(init_g)
+        sess.run(init_l)
+        for pass_id in range(args.pass_num):
+            sess.run(g_accuracy_reset_op)
+
+            pass_start = time.time()
+            for batch_id, data in enumerate(train_reader()):
+                images_data = np.array(
+                    map(lambda x: np.transpose(x[0].reshape([1, 28, 28]), axes=[1,2,0]), data)).astype("float32")
+                labels_data = np.array(map(lambda x: x[1], data)).astype(
+                    "int64")
+
+                start = time.time()
+                _, loss, acc, g_acc = sess.run(
+                    [train_op, avg_cost, accuracy, g_accuracy],
+                    feed_dict={images: images_data,
+                               labels: labels_data})
+                end = time.time()
+
+                print("pass=%d, batch=%d, loss=%f, error=%f, elapse=%f" %
+                      (pass_id, batch_id, loss, 1 - acc, (end - start) / 1000))
+
+            pass_end = time.time()
+            test_avg_acc = eval_test()
+
+            print(
+                "pass=%d, training_avg_accuracy=%f, test_avg_acc=%f, elapse=%f"
+                % (pass_id, g_acc[1], test_avg_acc,
+                   (pass_end - pass_start) / 1000))
+
+
+def print_arguments(args):
+    print('-----------  Configuration Arguments -----------')
+    for arg, value in sorted(vars(args).iteritems()):
+        print('%s: %s' % (arg, value))
+    print('------------------------------------------------')
+
+
+if __name__ == '__main__':
+    args = parse_args()
+    print_arguments(args)
+    run_benchmark(args)

benchmark/tensorflow/resnet.py

+#   Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+"""
+based on https://github.com/tensorflow/models/blob/master/official/resnet/resnet_model.py
+
+Get help: python resnet.py --help
+See performance on flowers: python resnet.py
+Train on cifar10: python resnet.py --data=cifar10 --with_test
+"""
+
+from __future__ import absolute_import
+from __future__ import division
+from __future__ import print_function
+
+import argparse
+import time
+import numpy as np
+
+import paddle.v2 as paddle
+import tensorflow as tf
+
+DTYPE = tf.float32
+
+
+def parse_args():
+    parser = argparse.ArgumentParser('Convolution model benchmark.')
+    parser.add_argument(
+        '--model',
+        type=str,
+        choices=['resnet'],
+        default='resnet',
+        help='The model architecture.')
+    parser.add_argument(
+        '--batch_size', type=int, default=32, help='The minibatch size.')
+    parser.add_argument(
+        '--use_fake_data',
+        action='store_true',
+        help='use real data or fake data')
+    parser.add_argument(
+        '--skip_batch_num',
+        type=int,
+        default=5,
+        help='The first num of minibatch num to skip, for better performance test'
+    )
+    parser.add_argument(
+        '--iterations',
+        type=int,
+        default=105,
+        help='The number of minibatches.')
+    parser.add_argument(
+        '--pass_num', type=int, default=300, help='The number of passes.')
+    parser.add_argument(
+        '--order',
+        type=str,
+        default='NHWC',
+        choices=['NCHW', 'NHWC'],
+        help='The data order, now only support NCHW.')
+    parser.add_argument(
+        '--device',
+        type=str,
+        default='GPU',
+        choices=['CPU', 'GPU'],
+        help='The device type.')
+    parser.add_argument(
+        '--data',
+        type=str,
+        default='flowers102',
+        choices=['flowers102', 'cifar10'],
+        help='The kinds of data.')
+    parser.add_argument(
+        '--infer_only', action='store_true', help='If set, run forward only.')
+    parser.add_argument(
+        '--use_cprof', action='store_true', help='If set, use cProfile.')
+    parser.add_argument(
+        '--with_test',
+        action='store_true',
+        help='If set, test the testset during training.')
+    parser.add_argument(
+        '--use_nvprof',
+        action='store_true',
+        help='If set, use nvprof for CUDA.')
+    args = parser.parse_args()
+    return args
+
+
+def print_arguments(args):
+    vars(args)['use_nvprof'] = (vars(args)['use_nvprof'] and
+                                vars(args)['device'] == 'GPU')
+    vars(args)['iterations'] = vars(args)['pass_num'] * 1000 if vars(args)[
+        'with_test'] else vars(args)['iterations']
+    print('-----------  Configuration Arguments -----------')
+    for arg, value in sorted(vars(args).iteritems()):
+        print('%s: %s' % (arg, value))
+    print('------------------------------------------------')
+
+
+def fixed_padding(inputs, kernel_size, data_format):
+    """Pads the input along the spatial dimensions independently of input size.
+  Args:
+    inputs: A tensor of size [batch, channels, height_in, width_in] or
+      [batch, height_in, width_in, channels] depending on data_format.
+    kernel_size: The kernel to be used in the conv2d or max_pool2d operation.
+                 Should be a positive integer.
+    data_format: The input format ('channels_last' or 'channels_first').
+  Returns:
+    A tensor with the same format as the input with the data either intact
+    (if kernel_size == 1) or padded (if kernel_size > 1).
+  """
+    pad_total = kernel_size - 1
+    pad_beg = pad_total // 2
+    pad_end = pad_total - pad_beg
+
+    if data_format == 'channels_first':
+        padded_inputs = tf.pad(inputs, [[0, 0], [0, 0], [pad_beg, pad_end],
+                                        [pad_beg, pad_end]])
+    else:
+        padded_inputs = tf.pad(inputs, [[0, 0], [pad_beg, pad_end],
+                                        [pad_beg, pad_end], [0, 0]])
+    return padded_inputs
+
+
+def conv2d_fixed_padding(inputs, filters, kernel_size, strides, data_format):
+    """Strided 2-D convolution with explicit padding."""
+    # The padding is consistent and is based only on `kernel_size`, not on the
+    # dimensions of `inputs` (as opposed to using `tf.layers.conv2d` alone).
+    # This is consistent with PaddlePaddle.
+    # In addition, the calculation for output size in TensorFlow can refer: 
+    # https://github.com/tensorflow/tensorflow/blob/master/tensorflow/core/framework/common_shape_fns.cc
+    if strides > 1:
+        inputs = fixed_padding(inputs, kernel_size, data_format)
+
+    return tf.layers.conv2d(
+        inputs=inputs,
+        filters=filters,
+        kernel_size=kernel_size,
+        strides=strides,
+        padding=('SAME' if strides == 1 else 'VALID'),
+        use_bias=False,
+        kernel_initializer=tf.variance_scaling_initializer(),
+        data_format=data_format)
+
+
+def conv_bn(inputs,
+            filters,
+            kernel_size,
+            strides,
+            is_training,
+            data_format,
+            act=True):
+    # def conv2d_fixed_padding(inputs, filters, kernel_size, strides, data_format):
+    # set fused=True for a significant performance boost. See
+    # https://www.tensorflow.org/performance/performance_guide#common_fused_ops
+    inputs = conv2d_fixed_padding(
+        inputs=inputs,
+        filters=filters,
+        kernel_size=kernel_size,
+        strides=strides,
+        data_format=data_format)
+    inputs = tf.layers.batch_normalization(
+        inputs=inputs,
+        axis=1 if data_format == 'channels_first' else 3,
+        momentum=0.9,
+        epsilon=1e-05,
+        center=True,
+        scale=True,
+        training=is_training,
+        fused=True)
+    if act:
+        inputs = tf.nn.relu(inputs)
+    return inputs
+
+
+def basicblock(inputs, filters, is_training, projection_shortcut, strides,
+               data_format):
+    shortcut = inputs
+    if projection_shortcut is not None:
+        shortcut = projection_shortcut(inputs)
+    inputs = conv_bn(inputs, filters, 3, strides, is_training, data_format)
+    inputs = conv_bn(inputs, filters, 3, 1, is_training, data_format, act=False)
+    inputs = inputs + shortcut
+    inputs = tf.nn.relu(inputs)
+    return inputs
+
+
+def bottleneck(inputs, filters, is_training, projection_shortcut, strides,
+               data_format):
+    shortcut = inputs
+    if projection_shortcut is not None:
+        shortcut = projection_shortcut(inputs)
+    inputs = conv_bn(inputs, filters, 1, strides, is_training, data_format)
+    inputs = conv_bn(inputs, filters, 3, 1, is_training, data_format, act=False)
+    inputs = conv_bn(
+        inputs, filters * 4, 1, 1, is_training, data_format, act=False)
+    inputs = inputs + shortcut
+    inputs = tf.nn.relu(inputs)
+    return inputs
+
+
+def block_layer(inputs, filters, block_fn, blocks, strides, is_training, name,
+                data_format):
+    # Bottleneck blocks end with 4x the number of filters as they start with
+    filters_out = 4 * filters if block_fn is bottleneck else filters
+
+    def projection_shortcut(inputs):
+        return conv2d_fixed_padding(
+            inputs=inputs,
+            filters=filters_out,
+            kernel_size=1,
+            strides=strides,
+            data_format=data_format)
+
+    # Only the first block per block_layer uses projection_shortcut and strides
+    inputs = block_fn(inputs, filters, is_training, projection_shortcut,
+                      strides, data_format)
+
+    for _ in range(1, blocks):
+        inputs = block_fn(inputs, filters, is_training, None, 1, data_format)
+
+    return tf.identity(inputs, name)
+
+
+def resnet_imagenet(depth, class_dim, data_format):
+    """Returns the ResNet model for a given size and number of output classes."""
+
+    def resnet_generator(block_fn,
+                         layers,
+                         num_classes,
+                         data_format='channels_last'):
+        if data_format is None:
+            data_format = ('channels_first'
+                           if tf.test.is_built_with_cuda() else 'channels_last')
+
+        def model(inputs, is_training):
+            """Constructs the ResNet model given the inputs."""
+            if data_format == 'channels_first':
+                # Convert the inputs from channels_last (NHWC) to channels_first (NCHW).
+                # This provides a large performance boost on GPU. See
+                # https://www.tensorflow.org/performance/performance_guide#data_formats
+                inputs = tf.transpose(inputs, [0, 3, 1, 2])
+
+            inputs = conv_bn(inputs, 64, 7, 2, is_training, data_format)
+            inputs = tf.identity(inputs, 'initial_conv')
+            inputs = tf.layers.max_pooling2d(
+                inputs=inputs,
+                pool_size=3,
+                strides=2,
+                padding='SAME',
+                data_format=data_format)
+            inputs = tf.identity(inputs, 'initial_max_pool')
+            inputs = block_layer(inputs, 64, block_fn, layers[0], 1,
+                                 is_training, 'block_layer1', data_format)
+            inputs = block_layer(inputs, 128, block_fn, layers[1], 2,
+                                 is_training, 'block_layer2', data_format)
+            inputs = block_layer(inputs, 256, block_fn, layers[2], 2,
+                                 is_training, 'block_layer3', data_format)
+            inputs = block_layer(inputs, 512, block_fn, layers[3], 2,
+                                 is_training, 'block_layer4', data_format)
+            inputs = tf.layers.average_pooling2d(
+                inputs=inputs,
+                pool_size=7,
+                strides=1,
+                padding='VALID',
+                data_format=data_format)
+            inputs = tf.identity(inputs, 'final_avg_pool')
+            inputs = tf.reshape(inputs,
+                                [-1, 512 if block_fn is basicblock else 2048])
+            inputs = tf.layers.dense(inputs=inputs, units=num_classes)
+            inputs = tf.identity(inputs, 'final_dense')
+            return inputs
+
+        return model
+
+    model_params = {
+        18: {
+            'block': basicblock,
+            'layers': [2, 2, 2, 2]
+        },
+        34: {
+            'block': basicblock,
+            'layers': [3, 4, 6, 3]
+        },
+        50: {
+            'block': bottleneck,
+            'layers': [3, 4, 6, 3]
+        },
+        101: {
+            'block': bottleneck,
+            'layers': [3, 4, 23, 3]
+        },
+        152: {
+            'block': bottleneck,
+            'layers': [3, 8, 36, 3]
+        },
+        200: {
+            'block': bottleneck,
+            'layers': [3, 24, 36, 3]
+        }
+    }
+    if depth not in model_params:
+        raise ValueError('Not a valid depth:', depth)
+    params = model_params[depth]
+    return resnet_generator(params['block'], params['layers'], class_dim,
+                            data_format)
+
+
+def resnet_cifar10(depth, num_classes, data_format):
+    if depth % 6 != 2:
+        raise ValueError('depth must be 6n + 2:', depth)
+
+    num_blocks = (depth - 2) // 6
+
+    if data_format is None:
+        data_format = ('channels_first'
+                       if tf.test.is_built_with_cuda() else 'channels_last')
+
+    def model(inputs, is_training):
+        inputs = conv_bn(inputs, 16, 3, 1, is_training, data_format)
+        inputs = tf.identity(inputs, 'initial_conv')
+        inputs = block_layer(inputs, 16, basicblock, num_blocks, 1, is_training,
+                             'block_layer1', data_format)
+        inputs = block_layer(inputs, 32, basicblock, num_blocks, 2, is_training,
+                             'block_layer2', data_format)
+        inputs = block_layer(inputs, 64, basicblock, num_blocks, 2, is_training,
+                             'block_layer3', data_format)
+        inputs = tf.layers.average_pooling2d(
+            inputs=inputs,
+            pool_size=8,
+            strides=1,
+            padding='VALID',
+            data_format=data_format)
+        inputs = tf.identity(inputs, 'final_avg_pool')
+        inputs = tf.reshape(inputs, [-1, 64])
+        inputs = tf.layers.dense(inputs=inputs, units=num_classes)
+        inputs = tf.identity(inputs, 'final_dense')
+        return inputs
+
+    return model
+
+
+def run_benchmark(args, data_format='channels_last', device='/cpu:0'):
+    """Our model_fn for ResNet to be used with our Estimator."""
+
+    class_dim = 1000
+    dshape = (None, 224, 224, 3)
+
+    pdshape = (3, 224, 224)
+    if args.data == 'flowers102':
+        class_dim = 102
+        dshape = (None, 224, 224, 3)
+        pdshape = (3, 224, 224)
+    elif args.data == 'cifar10':
+        class_dim = 10
+        dshape = (None, 32, 32, 3)
+        pdshape = (3, 32, 32)
+
+    with tf.device(device):
+        images = tf.placeholder(DTYPE, shape=dshape)
+        labels = tf.placeholder(tf.int64, shape=(None, ))
+        is_training = tf.placeholder('bool')
+        onehot_labels = tf.one_hot(labels, depth=class_dim)
+
+        network = resnet_cifar10(
+            32, class_dim,
+            data_format) if args.data == 'cifar10' else resnet_imagenet(
+                50, class_dim, data_format)
+
+        logits = network(inputs=images, is_training=is_training)
+
+        cross_entropy = tf.losses.softmax_cross_entropy(
+            logits=logits, onehot_labels=onehot_labels)
+        avg_cost = tf.reduce_mean(cross_entropy)
+
+        correct = tf.equal(tf.argmax(logits, 1), labels)
+        accuracy = tf.reduce_mean(tf.cast(correct, tf.float32))
+
+        lr = 0.1 if args.data == 'cifar10' else 0.01
+        optimizer = tf.train.MomentumOptimizer(learning_rate=lr, momentum=0.9)
+
+        # Batch norm requires update_ops to be added as a train_op dependency.
+        update_ops = tf.get_collection(tf.GraphKeys.UPDATE_OPS)
+        with tf.control_dependencies(update_ops):
+            train_op = optimizer.minimize(avg_cost)
+
+    train_reader = paddle.batch(
+        paddle.reader.shuffle(
+            paddle.dataset.cifar.train10()
+            if args.data == 'cifar10' else paddle.dataset.flowers.train(),
+            buf_size=5120),
+        batch_size=args.batch_size)
+    test_reader = paddle.batch(
+        paddle.dataset.cifar.test10()
+        if args.data == 'cifar10' else paddle.dataset.flowers.test(),
+        batch_size=100)
+
+    def test():
+        test_accs = []
+        for batch_id, data in enumerate(test_reader()):
+            test_images = np.array(
+                map(lambda x: np.transpose(x[0].reshape(pdshape),
+                axes=[1, 2, 0]), data)).astype("float32")
+            test_labels = np.array(map(lambda x: x[1], data)).astype('int64')
+            test_accs.append(
+                accuracy.eval(feed_dict={
+                    images: test_images,
+                    labels: test_labels,
+                    is_training: False
+                }))
+        print("Pass = %d, Train performance = %f imgs/s, Test accuracy = %f\n" %
+              (pass_id, num_samples / train_elapsed, np.mean(test_accs)))
+
+    config = tf.ConfigProto(
+        intra_op_parallelism_threads=1, inter_op_parallelism_threads=1)
+    config.gpu_options.allow_growth = True
+
+    with tf.Session(config=config) as sess:
+        init_g = tf.global_variables_initializer()
+        init_l = tf.local_variables_initializer()
+        sess.run(init_g)
+        sess.run(init_l)
+
+        if args.use_fake_data:
+            data = train_reader().next()
+            images_data = np.array(
+                    map(lambda x: np.transpose(x[0].reshape(pdshape),
+                    axes=[1, 2, 0]), data)).astype("float32")
+            labels_data = np.array(map(lambda x: x[1], data)).astype('int64')
+        iters, num_samples, start_time = 0, 0, 0.0
+        for pass_id in range(args.pass_num):
+            if iters == args.iterations:
+                break
+            train_accs = []
+            train_losses = []
+            for batch_id, data in enumerate(train_reader()):
+                if iters == args.skip_batch_num:
+                    start_time = time.time()
+                    num_samples = 0
+                if iters == args.iterations:
+                    break
+                if not args.use_fake_data:
+                    images_data = np.array(
+                        map(lambda x: np.transpose(x[0].reshape(pdshape),
+                        axes=[1, 2, 0]), data)).astype("float32")
+                    labels_data = np.array(map(lambda x: x[1], data)).astype(
+                        'int64')
+                _, loss, acc = sess.run([train_op, avg_cost, accuracy],
+                                        feed_dict={
+                                            images: images_data,
+                                            labels: labels_data,
+                                            is_training: True
+                                        })
+                iters += 1
+                train_accs.append(acc)
+                train_losses.append(loss)
+                num_samples += len(data)
+                print("Pass=%d, Iter=%d, Loss=%f, Accuray=%f\n" %
+                      (pass_id, iters, loss, acc))
+
+            train_elapsed = time.time() - start_time
+            print("Pass=%d, Loss=%f, Accuray=%f\n" %
+                  (pass_id, np.mean(train_losses), np.mean(train_accs)))
+
+            # evaluation
+            if args.with_test:
+                test()
+
+        if not args.with_test:
+            duration = time.time() - start_time
+            examples_per_sec = num_samples / duration
+            sec_per_batch = duration / (iters - args.skip_batch_num)
+
+            print('Total examples: %d, total time: %.5f' %
+                  (num_samples, duration))
+            print('%.5f examples/sec, %.5f sec/batch' %
+                  (examples_per_sec, sec_per_batch))
+
+
+if __name__ == '__main__':
+    args = parse_args()
+    print_arguments(args)
+    if tf.test.is_built_with_cuda():
+        device = '/device:GPU:0'
+        if args.order == 'NHWC':
+            data_format = 'channels_last'
+        else:
+            data_format = 'channels_first'
+    else:
+        device = '/cpu:0'
+        if args.order == 'NHWC':
+            data_format = 'channels_last'
+        else:
+            raise ValueError('Only support NHWC order in CPU mode')
+
+    run_benchmark(args, data_format, device)

benchmark/tensorflow/stacked_dynamic_lstm.py

+#   Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from __future__ import absolute_import
+from __future__ import division
+from __future__ import print_function
+
+import numpy as np
+import argparse
+import time
+import tensorflow as tf
+
+import paddle.v2 as paddle
+
+
+def parse_args():
+    parser = argparse.ArgumentParser("LSTM model benchmark.")
+    parser.add_argument(
+        '--batch_size',
+        type=int,
+        default=32,
+        help='The sequence number of a batch data. (default: %(default)d)')
+    parser.add_argument(
+        '--stacked_num',
+        type=int,
+        default=5,
+        help='Number of lstm layers to stack. (default: %(default)d)')
+    parser.add_argument(
+        '--embedding_dim',
+        type=int,
+        default=512,
+        help='Dimension of embedding table. (default: %(default)d)')
+    parser.add_argument(
+        '--hidden_dim',
+        type=int,
+        default=512,
+        help='Hidden size of lstm unit. (default: %(default)d)')
+    parser.add_argument(
+        '--pass_num',
+        type=int,
+        default=10,
+        help='Epoch number to train. (default: %(default)d)')
+    parser.add_argument(
+        '--learning_rate',
+        type=float,
+        default=0.0002,
+        help='Learning rate used to train. (default: %(default)f)')
+    parser.add_argument(
+        '--infer_only', action='store_true', help='If set, run forward only.')
+    args = parser.parse_args()
+    return args
+
+
+def print_arguments(args):
+    print('-----------  Configuration Arguments -----------')
+    for arg, value in sorted(vars(args).iteritems()):
+        print('%s: %s' % (arg, value))
+    print('------------------------------------------------')
+
+
+def dynamic_lstm_model(dict_size,
+                       embedding_dim,
+                       hidden_dim,
+                       stacked_num,
+                       class_num=2,
+                       is_train=True):
+    word_idx = tf.placeholder(tf.int64, shape=[None, None])
+    sequence_length = tf.placeholder(tf.int64, shape=[None, ])
+
+    embedding_weights = tf.get_variable('word_embeddings',
+                                        [dict_size, embedding_dim])
+    embedding = tf.nn.embedding_lookup(embedding_weights, word_idx)
+
+    lstm_cell = tf.nn.rnn_cell.LSTMCell(
+        num_units=hidden_dim, use_peepholes=False)
+    stacked_cell = tf.nn.rnn_cell.MultiRNNCell([lstm_cell] * stacked_num)
+
+    # final_state [LSTMTuple(c, h), LSTMTuple(c, h) ...] total stacked_num LSTMTuples
+    _, final_state = tf.nn.dynamic_rnn(
+        cell=stacked_cell,
+        inputs=embedding,
+        dtype=tf.float32,
+        sequence_length=sequence_length)
+
+    w = tf.Variable(
+        tf.truncated_normal([hidden_dim, class_num]), dtype=tf.float32)
+    bias = tf.Variable(
+        tf.constant(
+            value=0.0, shape=[class_num], dtype=tf.float32))
+    prediction = tf.matmul(final_state[-1][1], w) + bias
+
+    if not is_train:
+        return (word_idx, sequence_length), tf.nn.softmax(prediction)
+
+    label = tf.placeholder(tf.int64, shape=[None, ])
+    loss = tf.nn.softmax_cross_entropy_with_logits(
+        labels=tf.one_hot(label, 2), logits=prediction)
+    avg_loss = tf.reduce_mean(loss)
+
+    correct_count = tf.equal(tf.argmax(prediction, 1), label)
+    acc = tf.reduce_mean(tf.cast(correct_count, tf.float32))
+
+    with tf.variable_scope("reset_metrics_accuracy_scope") as scope:
+        g_acc = tf.metrics.accuracy(label, tf.argmax(prediction, axis=1))
+        vars = tf.contrib.framework.get_variables(
+            scope, collection=tf.GraphKeys.LOCAL_VARIABLES)
+        reset_op = tf.variables_initializer(vars)
+
+    return (word_idx, sequence_length, label), avg_loss, acc, g_acc, reset_op
+
+
+def padding_data(data, padding_size, value):
+    data = data + [value] * padding_size
+    return data[:padding_size]
+
+
+def train(args):
+    word_dict = paddle.dataset.imdb.word_dict()
+    dict_size = len(word_dict)
+
+    feeding_list, avg_loss, acc, g_acc, reset_op = dynamic_lstm_model(
+        dict_size, args.embedding_dim, args.hidden_dim, args.stacked_num)
+
+    adam_optimizer = tf.train.AdamOptimizer(learning_rate=args.learning_rate)
+    train_op = adam_optimizer.minimize(avg_loss)
+
+    train_reader = paddle.batch(
+        paddle.reader.shuffle(
+            paddle.dataset.imdb.train(word_dict), buf_size=25000),
+        batch_size=args.batch_size)
+
+    test_reader = paddle.batch(
+        paddle.reader.shuffle(
+            paddle.dataset.imdb.test(word_dict), buf_size=25000),
+        batch_size=args.batch_size)
+
+    def do_validation(sess):
+        sess.run(reset_op)
+        for batch_id, data in enumerate(test_reader()):
+            word_idx = map(lambda x: x[0], data)
+            sequence_length = np.array(
+                [len(seq) for seq in word_idx]).astype('int64')
+            maxlen = np.max(sequence_length)
+            word_idx = [padding_data(seq, maxlen, 0) for seq in word_idx]
+            word_idx = np.array(word_idx).astype('int64')
+            label = np.array(map(lambda x: x[1], data)).astype('int64')
+
+            _, loss, fetch_acc, fetch_g_acc = sess.run(
+                [train_op, avg_loss, acc, g_acc],
+                feed_dict={
+                    feeding_list[0]: word_idx,
+                    feeding_list[1]: sequence_length,
+                    feeding_list[2]: label
+                })
+
+        return fetch_g_acc[1]
+
+    config = tf.ConfigProto(
+        intra_op_parallelism_threads=1, inter_op_parallelism_threads=1)
+    config.gpu_options.allow_growth = True
+    with tf.Session(config=config) as sess:
+        init_g = tf.global_variables_initializer()
+        init_l = tf.local_variables_initializer()
+        sess.run(init_l)
+        sess.run(init_g)
+
+        for pass_id in xrange(args.pass_num):
+            # clear accuracy local variable 
+            sess.run(reset_op)
+            pass_start_time = time.time()
+            words_seen = 0
+
+            for batch_id, data in enumerate(train_reader()):
+                word_idx = map(lambda x: x[0], data)
+                sequence_length = np.array(
+                    [len(seq) for seq in word_idx]).astype('int64')
+                words_seen += np.sum(sequence_length)
+                maxlen = np.max(sequence_length)
+                word_idx = [padding_data(seq, maxlen, 0) for seq in word_idx]
+                word_idx = np.array(word_idx).astype('int64')
+                label = np.array(map(lambda x: x[1], data)).astype('int64')
+
+                _, loss, fetch_acc, fetch_g_acc = sess.run(
+                    [train_op, avg_loss, acc, g_acc],
+                    feed_dict={
+                        feeding_list[0]: word_idx,
+                        feeding_list[1]: sequence_length,
+                        feeding_list[2]: label
+                    })
+
+                print("pass_id=%d, batch_id=%d, loss: %f, acc: %f, avg_acc: %f"
+                      % (pass_id, batch_id, loss, fetch_acc, fetch_g_acc[1]))
+
+            pass_end_time = time.time()
+            time_consumed = pass_end_time - pass_start_time
+            words_per_sec = words_seen / time_consumed
+            test_acc = do_validation(sess)
+            print("pass_id=%d, test_acc: %f, words/s: %f, sec/pass: %f" %
+                  (pass_id, test_acc, words_per_sec, time_consumed))
+
+
+if __name__ == '__main__':
+    args = parse_args()
+    print_arguments(args)
+
+    if args.infer_only:
+        pass
+    else:
+        train(args)

benchmark/tensorflow/vgg.py

+#   Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+"""VGG16 benchmark in TensorFlow"""
+import tensorflow as tf
+import paddle.v2 as paddle
+import numpy as np
+import argparse
+import time
+
+parser = argparse.ArgumentParser(description=__doc__)
+parser.add_argument(
+    '--batch_size', type=int, default=128, help="Batch size for training.")
+parser.add_argument(
+    '--skip_batch_num',
+    type=int,
+    default=5,
+    help='The first num of minibatch num to skip, for better performance test')
+parser.add_argument(
+    '--iterations', type=int, default=80, help='The number of minibatches.')
+parser.add_argument(
+    '--learning_rate',
+    type=float,
+    default=1e-3,
+    help="Learning rate for training.")
+parser.add_argument('--num_passes', type=int, default=50, help="No. of passes.")
+parser.add_argument(
+    '--device',
+    type=str,
+    default='GPU',
+    choices=['CPU', 'GPU'],
+    help="The device type.")
+parser.add_argument(
+    '--data_format',
+    type=str,
+    default='NHWC',
+    choices=['NCHW', 'NHWC'],
+    help='The data order, NCHW=[batch, channels, height, width].'
+    'Only support NHWC right now.')
+parser.add_argument(
+    '--data_set',
+    type=str,
+    default='cifar10',
+    choices=['cifar10', 'flowers'],
+    help='Optional dataset for benchmark.')
+args = parser.parse_args()
+
+
+class VGG16Model(object):
+    def __init__(self):
+        self.parameters = []
+
+    def batch_norm_relu(self, inputs, is_training):
+        """Performs a batch normalization followed by a ReLU."""
+        # We set fused=True for a significant speed boost. See
+        # https://www.tensorflow.org/speed/speed_guide#common_fused_ops
+        inputs = tf.layers.batch_normalization(
+            inputs=inputs,
+            axis=1 if args.data_format == 'NCHW' else -1,
+            momentum=0.9,
+            epsilon=1e-05,
+            center=True,
+            scale=True,
+            training=is_training,
+            fused=True)
+        inputs = tf.nn.relu(inputs)
+        return inputs
+
+    def conv_bn_layer(self,
+                      name,
+                      images,
+                      kernel_shape,
+                      is_training,
+                      drop_rate=0.0):
+        with tf.name_scope(name) as scope:
+            kernel = tf.Variable(
+                tf.truncated_normal(
+                    kernel_shape, dtype=tf.float32, stddev=1e-1),
+                name='weights')
+            conv = tf.nn.conv2d(
+                images,
+                kernel, [1, 1, 1, 1],
+                data_format=args.data_format,
+                padding='SAME')
+            biases = tf.Variable(
+                tf.constant(
+                    0.0, shape=[kernel_shape[-1]], dtype=tf.float32),
+                trainable=True,
+                name='biases')
+            out = tf.nn.bias_add(conv, biases)
+            out = self.batch_norm_relu(out, is_training)
+            out = tf.layers.dropout(out, rate=drop_rate, training=is_training)
+            return out
+
+    def fc_layer(self, name, inputs, shape):
+        with tf.name_scope(name) as scope:
+            fc_w = tf.Variable(
+                tf.truncated_normal(
+                    shape, dtype=tf.float32, stddev=1e-1),
+                name='weights')
+            fc_b = tf.Variable(
+                tf.constant(
+                    0.0, shape=[shape[-1]], dtype=tf.float32),
+                trainable=True,
+                name='biases')
+            out = tf.nn.bias_add(tf.matmul(inputs, fc_w), fc_b)
+            return out
+
+    def network(self, images, class_dim, is_training):
+        """ VGG16 model structure.
+
+            TODO(kuke): enable this network to support the 'NCHW' data format
+        """
+
+        # conv1
+        conv1_1 = self.conv_bn_layer(
+            'conv1_1', images, [3, 3, 3, 64], is_training, drop_rate=0.3)
+        conv1_2 = self.conv_bn_layer(
+            'conv1_2', conv1_1, [3, 3, 64, 64], is_training, drop_rate=0.0)
+        # pool1
+        pool1 = tf.nn.max_pool(
+            conv1_2,
+            ksize=[1, 2, 2, 1],
+            strides=[1, 2, 2, 1],
+            padding='SAME',
+            name='pool1')
+        # conv2
+        conv2_1 = self.conv_bn_layer(
+            'conv2_1', pool1, [3, 3, 64, 128], is_training, drop_rate=0.4)
+        conv2_2 = self.conv_bn_layer(
+            'conv2_2', conv2_1, [3, 3, 128, 128], is_training, drop_rate=0.0)
+        # pool2
+        pool2 = tf.nn.max_pool(
+            conv2_2,
+            ksize=[1, 2, 2, 1],
+            strides=[1, 2, 2, 1],
+            padding='SAME',
+            name='pool2')
+        # conv3
+        conv3_1 = self.conv_bn_layer(
+            'conv3_1', pool2, [3, 3, 128, 256], is_training, drop_rate=0.4)
+        conv3_2 = self.conv_bn_layer(
+            'conv3_2', conv3_1, [3, 3, 256, 256], is_training, drop_rate=0.4)
+        conv3_3 = self.conv_bn_layer(
+            'conv3_3', conv3_2, [3, 3, 256, 256], is_training, drop_rate=0.0)
+        # pool3
+        pool3 = tf.nn.max_pool(
+            conv3_3,
+            ksize=[1, 2, 2, 1],
+            strides=[1, 2, 2, 1],
+            padding='SAME',
+            name='pool3')
+        # conv4
+        conv4_1 = self.conv_bn_layer(
+            'conv4_1', pool3, [3, 3, 256, 512], is_training, drop_rate=0.4)
+        conv4_2 = self.conv_bn_layer(
+            'conv4_2', conv4_1, [3, 3, 512, 512], is_training, drop_rate=0.4)
+        conv4_3 = self.conv_bn_layer(
+            'conv4_3', conv4_2, [3, 3, 512, 512], is_training, drop_rate=0.0)
+        # pool4
+        pool4 = tf.nn.max_pool(
+            conv4_3,
+            ksize=[1, 2, 2, 1],
+            strides=[1, 2, 2, 1],
+            padding='SAME',
+            name='pool4')
+        # conv5
+        conv5_1 = self.conv_bn_layer(
+            'conv5_1', pool4, [3, 3, 512, 512], is_training, drop_rate=0.4)
+        conv5_2 = self.conv_bn_layer(
+            'conv5_2', conv5_1, [3, 3, 512, 512], is_training, drop_rate=0.4)
+        conv5_3 = self.conv_bn_layer(
+            'conv5_3', conv5_2, [3, 3, 512, 512], is_training, drop_rate=0.0)
+        # pool5
+        pool5 = tf.nn.max_pool(
+            conv5_3,
+            ksize=[1, 2, 2, 1],
+            strides=[1, 2, 2, 1],
+            padding='SAME',
+            name='pool4')
+        # flatten
+        shape = int(np.prod(pool5.get_shape()[1:]))
+        pool5_flat = tf.reshape(pool5, [-1, shape])
+        # fc1
+        drop = tf.layers.dropout(pool5_flat, rate=0.5, training=is_training)
+        fc1 = self.fc_layer('fc1', drop, [shape, 512])
+        # fc2
+        bn = self.batch_norm_relu(fc1, is_training)
+        drop = tf.layers.dropout(bn, rate=0.5, training=is_training)
+        fc2 = self.fc_layer('fc2', drop, [512, 512])
+
+        fc3 = self.fc_layer('fc3', fc2, [512, class_dim])
+
+        return fc3
+
+
+def run_benchmark():
+    """Run benchmark on cifar10 or flowers."""
+
+    if args.data_set == "cifar10":
+        class_dim = 10
+        raw_shape = (3, 32, 32)
+        dat_shape = (None, 32, 32, 3) if args.data_format == 'NHWC' else (
+            None, 3, 32, 32)
+    else:
+        class_dim = 102
+        raw_shape = (3, 224, 224)
+        dat_shape = (None, 224, 224, 3) if args.data_format == 'NHWC' else (
+            None, 3, 224, 224)
+
+    device = '/cpu:0' if args.device == 'CPU' else '/device:GPU:0'
+
+    with tf.device(device):
+        images = tf.placeholder(tf.float32, shape=dat_shape)
+        labels = tf.placeholder(tf.int64, shape=(None, ))
+        is_training = tf.placeholder('bool')
+        onehot_labels = tf.one_hot(labels, depth=class_dim)
+
+        vgg16 = VGG16Model()
+        logits = vgg16.network(images, class_dim, is_training)
+        loss = tf.losses.softmax_cross_entropy(
+            onehot_labels=onehot_labels, logits=logits)
+        avg_loss = tf.reduce_mean(loss)
+
+        correct = tf.equal(tf.argmax(logits, 1), labels)
+        accuracy = tf.reduce_mean(tf.cast(correct, tf.float32))
+
+        optimizer = tf.train.AdamOptimizer(learning_rate=args.learning_rate)
+        update_ops = tf.get_collection(tf.GraphKeys.UPDATE_OPS)
+        with tf.control_dependencies(update_ops):
+            train_op = optimizer.minimize(avg_loss)
+
+    # data reader
+    train_reader = paddle.batch(
+        paddle.reader.shuffle(
+            paddle.dataset.cifar.train10()
+            if args.data_set == 'cifar10' else paddle.dataset.flowers.train(),
+            buf_size=5120),
+        batch_size=args.batch_size)
+    test_reader = paddle.batch(
+        paddle.reader.shuffle(
+            paddle.dataset.cifar.test10()
+            if args.data_set == 'cifar10' else paddle.dataset.flowers.test(),
+            buf_size=5120),
+        batch_size=args.batch_size)
+
+    # test
+    def test():
+        test_accs = []
+        for batch_id, data in enumerate(test_reader()):
+            test_images = np.array(
+         map(lambda x: np.transpose(x[0].reshape(raw_shape),
+         axes=[1, 2, 0]) if args.data_format == 'NHWC' else x[0], data)).astype("float32")
+            test_labels = np.array(map(lambda x: x[1], data)).astype('int64')
+            test_accs.append(
+                accuracy.eval(feed_dict={
+                    images: test_images,
+                    labels: test_labels,
+                    is_training: False
+                }))
+        return np.mean(test_accs)
+
+    config = tf.ConfigProto(
+        intra_op_parallelism_threads=1, inter_op_parallelism_threads=1)
+    config.gpu_options.allow_growth = True
+
+    with tf.Session(config=config) as sess:
+        init_g = tf.global_variables_initializer()
+        init_l = tf.local_variables_initializer()
+        sess.run(init_g)
+        sess.run(init_l)
+        iters, num_samples, start_time = 0, 0, time.time()
+        for pass_id in range(args.num_passes):
+            # train
+            num_samples = 0
+            start_time = time.time()
+            for batch_id, data in enumerate(train_reader()):
+                if iters == args.skip_batch_num:
+                    start_time = time.time()
+                    num_samples = 0
+                if iters == args.iterations:
+                    break
+                train_images = np.array(
+                    map(lambda x: np.transpose(x[0].reshape(raw_shape),
+                    axes=[1, 2, 0]) if args.data_format == 'NHWC' else x[0], data)).astype("float32")
+                train_labels = np.array(map(lambda x: x[1], data)).astype(
+                    'int64')
+                _, loss, acc = sess.run([train_op, avg_loss, accuracy],
+                                        feed_dict={
+                                            images: train_images,
+                                            labels: train_labels,
+                                            is_training: True
+                                        })
+                iters += 1
+                num_samples += len(data)
+                print("Pass = %d, Iters = %d, Loss = %f, Accuracy = %f" %
+                      (pass_id, iters, loss, acc))
+            train_elapsed = time.time() - start_time
+            # test
+            pass_test_acc = test()
+            print("Pass = %d, Train speed = %f imgs/s, Test accuracy = %f\n" %
+                  (pass_id, num_samples / train_elapsed, pass_test_acc))
+
+
+def print_arguments():
+    print('-----------  Configuration Arguments -----------')
+    for arg, value in sorted(vars(args).iteritems()):
+        print('%s: %s' % (arg, value))
+    print('------------------------------------------------')
+
+
+if __name__ == '__main__':
+    print_arguments()
+    run_benchmark()

paddle/fluid/platform/call_once.h

-/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved.
-
-Licensed under the Apache License, Version 2.0 (the "License");
-you may not use this file except in compliance with the License.
-You may obtain a copy of the License at
-
-    http://www.apache.org/licenses/LICENSE-2.0
-
-Unless required by applicable law or agreed to in writing, software
-distributed under the License is distributed on an "AS IS" BASIS,
-WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-See the License for the specific language governing permissions and
-limitations under the License. */
-
-#pragma once
-
-#include <mutex>
-
-namespace paddle {
-namespace platform {
-
-/*
- The current implementation of std::call_once has a bug described in
- https://stackoverflow.com/questions/41717579/stdcall-once-hangs-on-second-call-after-callable-threw-on-first-call.
- This is likely caused by a deeper bug of pthread_once, which is discussed in
- https://patchwork.ozlabs.org/patch/482350/
-
- This wrap is a hack to avoid this bug.
-*/
-template <typename Callable, typename... Args>
-inline void call_once(std::once_flag& flag, Callable&& f, Args&&... args) {
-  bool good = true;
-  std::exception ex;
-  try {
-    std::call_once(flag,
-                   [&](Args&&... args) {
-                     try {
-                       f(args...);
-                     } catch (const std::exception& e) {
-                       ex = e;
-                       good = false;
-                     } catch (...) {
-                       ex = std::runtime_error("excption caught in call_once");
-                       good = false;
-                     }
-                   },
-                   args...);
-  } catch (std::system_error& x) {
-    throw std::runtime_error("call once failed");
-  }
-  if (!good) {
-    throw std::exception(ex);
-  }
-}
-
-}  // namespace platform
-}  // namespace paddle

paddle/fluid/platform/dynload/nccl.h

@@ -18,7 +18,6 @@ limitations under the License. */
 
 #include <mutex>  // NOLINT
 
-#include "paddle/fluid/platform/call_once.h"
 #include "paddle/fluid/platform/dynload/dynamic_loader.h"
 
 namespace paddle {