Add blk_plug in sync_thread will increase the performance of sync.
Because sync_thread did not blk_plug,so when raid sync, the bio merge
not well.

Testing environment:
SATA controller: Intel Corporation 82801JI (ICH10 Family) SATA AHCI
Controller.
OS:Linux xxx 3.5.0-rc2+ #340 SMP Tue Jun 12 09:00:25 CST 2012
x86_64 x86_64 x86_64 GNU/Linux.
RAID5: four ST31000524NS disk.

Without blk_plug:recovery speed about 63M/Sec;
Add blk_plug:recovery speed about 120M/Sec.

Using blktrace:
blktrace -d /dev/sdb -w 60  -o -|blkparse -i -

without blk_plug:
Total (8,16):
 Reads Queued:      309811,     1239MiB	 Writes Queued:           0,        0KiB
 Read Dispatches:   283583,     1189MiB	 Write Dispatches:        0,        0KiB
 Reads Requeued:         0		 Writes Requeued:         0
 Reads Completed:   273351,     1149MiB	 Writes Completed:        0,        0KiB
 Read Merges:        23533,    94132KiB	 Write Merges:            0,        0KiB
 IO unplugs:             0        	 Timer unplugs:           0

add blk_plug:
Total (8,16):
 Reads Queued:      428697,     1714MiB	 Writes Queued:           0,        0KiB
 Read Dispatches:     3954,     1714MiB	 Write Dispatches:        0,        0KiB
 Reads Requeued:         0		 Writes Requeued:         0
 Reads Completed:     3956,     1715MiB	 Writes Completed:        0,        0KiB
 Read Merges:       424743,     1698MiB	 Write Merges:            0,        0KiB
 IO unplugs:             0        	 Timer unplugs:        3384

The ratio of merge will be markedly increased.
Signed-off-by: Nmajianpeng <majianpeng@gmail.com>
Signed-off-by: NNeilBrown <neilb@suse.de>

In ops_run_io(), the call to md_wait_for_blocked_rdev will decrement
nr_pending so we lose the reference we hold on the rdev.
So atomic_inc it first to maintain the reference.

This bug was introduced by commit  73e92e51
    md/raid5.  Don't write to known bad block on doubtful devices.

which appeared in 3.0, so patch is suitable for stable kernels since
then.

Cc: stable@vger.kernel.org
Signed-off-by: Nmajianpeng <majianpeng@gmail.com>
Signed-off-by: NNeilBrown <neilb@suse.de>

In chunk_aligned_read() we are adding data_offset before calling
is_badblock.  But is_badblock also adds data_offset, so that is bad.

So move the addition of data_offset to after the call to
is_badblock.

This bug was introduced by commit 31c176ec
     md/raid5: avoid reading from known bad blocks.
which first appeared in 3.0.  So that patch is suitable for any
-stable kernel from 3.0.y onwards.  However it will need minor
revision for most of those (as the comment didn't appear until
recently).

Cc: stable@vger.kernel.org
Signed-off-by: Nmajianpeng <majianpeng@gmail.com>
Signed-off-by: NNeilBrown <neilb@suse.de>

If a RAID5 has both a failed device and a device marked as
'WantReplacement', then we should preferentially replace the failed
device.
However the current code replaces whichever is found first.
So split into 2 loops, check fail failed/missing first, and only check
for WantReplacement if nothing is failed or missing.
Reported-by: Nmajianpeng <majianpeng@gmail.com>
Signed-off-by: NNeilBrown <neilb@suse.de>

If a RAID10 has an odd number of chunks - as might happen when there
are an odd number of devices - the last chunk has no pair and so is
not mirrored.  We don't store data there, but when recovering the last
device in an array we retry to recover that last chunk from a
non-existent location.  This results in an error, and the recovery
aborts.

When we get to that last chunk we should just stop - there is nothing
more to do anyway.

This bug has been present since the introduction of RAID10, so the
patch is appropriate for any -stable kernel.

Cc: stable@vger.kernel.org
Reported-by: NChristian Balzer <chibi@gol.com>
Tested-by: NChristian Balzer <chibi@gol.com>
Signed-off-by: NNeilBrown <neilb@suse.de>

Coult -> Could
Signed-off-by: NLinus Torvalds <torvalds@linux-foundation.org>

Pull KVM fixes from Avi Kivity:
 "Fixing a scheduling-while-atomic bug in the ppc code, and a bug which
  allowed pci bridges to be assigned to guests."

* git://git.kernel.org/pub/scm/virt/kvm/kvm:
  KVM: PPC: Book3S HV: Drop locks around call to kvmppc_pin_guest_page
  KVM: Fix PCI header check on device assignment

Pull InfiniBand/RDMA fixes from Roland Dreier:
 - Fixes to new ocrdma driver
 - Typo in test in CMA

* tag 'rdma-fixes' of git://git.kernel.org/pub/scm/linux/kernel/git/roland/infiniband:
  RDMA/cma: QP type check on received REQs should be AND not OR
  RDMA/ocrdma: Fix off by one in ocrdma_query_gid()
  RDMA/ocrdma: Fixed RQ error CQE polling
  RDMA/ocrdma: Correct queue SGE calculation
  RDMA/ocrdma: Correct reported max queue sizes
  RDMA/ocrdma: Fixed GID table for vlan and events

Pull ARM SoC fixes from Olof Johansson:
 "Nothing very controversial in here.  Most of the fixes are for OMAP
  this time around, with some orion/kirkwood and a tegra patch mixed in."

* tag 'fixes-for-linus' of git://git.kernel.org/pub/scm/linux/kernel/git/arm/arm-soc:
  ARM: Orion: Fix Virtual/Physical mixup with watchdog
  ARM: Kirkwood: clk_register_gate_fn: add fn assignment
  ARM: Orion5x - Restore parts of io.h, with rework
  ARM: OMAP4: hwmod data: Force HDMI in no-idle while enabled
  ARM: OMAP2+: mux: fix sparse warning
  ARM: OMAP2+: CM: increase the module disable timeout
  ARM: OMAP4: clock data: add clockdomains for clocks used as main clocks
  ARM: OMAP4: hwmod data: fix 32k sync timer idle modes
  ARM: OMAP4+: hwmod: fix issue causing IPs not going back to Smart-Standby
  ARM: OMAP: Fix Beagleboard DVI reset gpio
  arm/dts: OMAP2: Fix interrupt controller binding
  ARM: OMAP2: Fix tusb6010 GPIO interrupt for n8x0
  ARM: OMAP2+: Fix MUSB ifdefs for platform init code
  ARM: tegra: make tegra_cpu_reset_handler_enable() __init
  ARM: OMAP: PM: Lock clocks list while generating summary
  ARM: iconnect: Remove include of removed linux/spi/orion_spi.h

Pull drm fixes from Dave Airlie:
 "Nothing major in here, one radeon SI fix for tiling, and one uninit
  var fix, two minor header file fixes."

* 'drm-fixes' of git://people.freedesktop.org/~airlied/linux:
  drm: drop comment about this header being autogenerated.
  drm/edid: don't return stack garbage from supports_rb
  vga_switcheroo: Add include guard
  drm/radeon: SI tiling fixes for display

The orion watchdog is expecting to be passed the physcial address of
the hardware, and will ioremap() it to give a virtual address it will
use as the base address for the hardware. However, when creating the
platform resource record, a virtual address was being used.

Add the necassary #define's so we can pass the physical address as
expected.

Tested on Kirkwood and Orion5x.

Cc: stable <stable@vger.kernel.org>
Signed-off-by: NAndrew Lunn <andrew@lunn.ch>
Signed-off-by: NOlof Johansson <olof@lixom.net>

In commit:
    98d9986c ARM: Kirkwood: Replace clock gating
the kirkwood clock gating has been reworked. A custom variant of
clock gating, that calls a custom function before gating the clock
off, has been introduced. However in clk_register_gate_fn() this
custom function "fn" is never assigned.

This patch adds the missing fn assignment.

Cc: stable <stable@vger.kernel.org>
Signed-off-by: NMarc Kleine-Budde <mkl@blackshift.org>
Tested-by: NAndrew Lunn <andrew@lunn.ch>
Acked-by: NAndrew Lunn <andrew@lunn.ch>
Signed-off-by: NOlof Johansson <olof@lixom.net>

Commit 4d5fc58d (ARM: remove bunch of
now unused mach/io.h files) removed the orion5x io.h. Unfortunately,
this is still needed for the definition of IO_SPACE_LIMIT which
overrides the default 64K. All Orion based systems have 1Mbyte of IO
space per PCI[e] bus, and try to request_resource() this size. Orion5x
has two such PCI buses.

It is likely that the original, removed version, was broken. This
version might be less broken. However, it has not been tested on
hardware with a PCI card, let alone hardware with a PCI card with IO
capabilities.
Signed-off-by: NAndrew Lunn <andrew@lunn.ch>
Acked-by: NRob Herring <rob.herring@calxeda.com>
Signed-off-by: NOlof Johansson <olof@lixom.net>

Merge tag 'omap-fixes-a-for-3.5rc' of git://git.kernel.org/pub/scm/linux/kernel/git/pjw/omap-pending into fixes

From Paul Walmsley (as per Tony Lindgren's request):
 "Some uncontroversial OMAP clock, hwmod, and compiler warning fixes for 3.5-rc"

* tag 'omap-fixes-a-for-3.5rc' of git://git.kernel.org/pub/scm/linux/kernel/git/pjw/omap-pending:
  ARM: OMAP4: hwmod data: Force HDMI in no-idle while enabled
  ARM: OMAP2+: mux: fix sparse warning
  ARM: OMAP2+: CM: increase the module disable timeout
  ARM: OMAP4: clock data: add clockdomains for clocks used as main clocks
  ARM: OMAP4: hwmod data: fix 32k sync timer idle modes
  ARM: OMAP4+: hwmod: fix issue causing IPs not going back to Smart-Standby
  ARM: OMAP: PM: Lock clocks list while generating summary

Merge tag 'omap-fixes-for-v3.5-rc3' of git://git.kernel.org/pub/scm/linux/kernel/git/tmlind/linux-omap into fixes

From Tony Lindgren:
"Here are a few fixes with the biggest one being fix for Beagle DVI
 reset. All of them are regression fixes, except for the missing omap2
 interrupt controller binding that somehow got missed earlier."

* tag 'omap-fixes-for-v3.5-rc3' of git://git.kernel.org/pub/scm/linux/kernel/git/tmlind/linux-omap:
  ARM: OMAP: Fix Beagleboard DVI reset gpio
  arm/dts: OMAP2: Fix interrupt controller binding
  ARM: OMAP2: Fix tusb6010 GPIO interrupt for n8x0
  ARM: OMAP2+: Fix MUSB ifdefs for platform init code

Pull Ceph fixes from Sage Weil:
 "There are a couple of fixes from Yan for bad pointer dereferences in
  the messenger code and when fiddling with page->private after page
  migration, a fix from Alex for a use-after-free in the osd client
  code, and a couple fixes for the message refcounting and shutdown
  ordering."

* 'for-linus' of git://git.kernel.org/pub/scm/linux/kernel/git/sage/ceph-client:
  libceph: flush msgr queue during mon_client shutdown
  rbd: Clear ceph_msg->bio_iter for retransmitted message
  libceph: use con get/put ops from osd_client
  libceph: osd_client: don't drop reply reference too early
  ceph: check PG_Private flag before accessing page->private

Pull XFS fixes from Ben Myers:
 - Fix stale data exposure with unwritten extents
 - Fix a warning in xfs_alloc_vextent with ODEBUG
 - Fix overallocation and alignment of pages for xfs_bufs
 - Fix a cursor leak
 - Fix a log hang
 - Fix a crash related to xfs_sync_worker
 - Rename xfs log structure from struct log to struct xlog so we can use
   crash dumps effectively

* tag 'for-linus-Jun-21-2012' of git://oss.sgi.com/xfs/xfs:
  xfs: rename log structure to xlog
  xfs: shutdown xfs_sync_worker before the log
  xfs: Fix overallocation in xfs_buf_allocate_memory()
  xfs: fix allocbt cursor leak in xfs_alloc_ag_vextent_near
  xfs: check for stale inode before acquiring iflock on push
  xfs: fix debug_object WARN at xfs_alloc_vextent()
  xfs: xfs_vm_writepage clear iomap_valid when !buffer_uptodate (REV2)

Pull perf updates from Ingo Molnar.

* 'perf-urgent-for-linus' of git://git.kernel.org/pub/scm/linux/kernel/git/tip/tip:
  ftrace: Make all inline tags also include notrace
  perf: Use css_tryget() to avoid propping up css refcount
  perf tools: Fix synthesizing tracepoint names from the perf.data headers
  perf stat: Fix default output file
  perf tools: Fix endianity swapping for adds_features bitmask

This comment is well out of date.
Signed-off-by: NDave Airlie <airlied@redhat.com>

As per the OMAP4 documentation, audio over HDMI must be transmitted in
no-idle mode. This patch adds the HWMOD_SWSUP_SIDLE so that omap_hwmod uses
no-idle/force-idle settings instead of smart-idle mode.

This is required as the DSS interface clock is used as functional clock
for the HDMI wrapper audio FIFO. If no-idle mode is not used, audio could
be choppy, have bad quality or not be audible at all.
Signed-off-by: NRicardo Neri <ricardo.neri@ti.com>
[b-cousson@ti.com: Update the subject and align the .flags
location with the script template]
Signed-off-by: NBenoit Cousson <b-cousson@ti.com>
Signed-off-by: NPaul Walmsley <paul@pwsan.com>

Commit bbd707ac ("ARM: omap2: use
machine specific hook for late init") resulted in the addition of this
sparse warning:

arch/arm/mach-omap2/mux.c:791:12: warning: symbol 'omap_mux_late_init' was not declared. Should it be static?

Fix by including the header file containing the prototype.
Signed-off-by: NPaul Walmsley <paul@pwsan.com>
Cc: Shawn Guo <shawn.guo@linaro.org>
Cc: Tony Lindgren <tony@atomide.com>

Increase the timeout for disabling an IP block to five milliseconds.
This is to handle the usb_host_fs idle latency, which takes almost
four milliseconds after a host controller reset.

This is the second of two patches needed to resolve the following
boot warning:

omap_hwmod: usb_host_fs: _wait_target_disable failed

Thanks to Sergei Shtylyov <sshtylyov@mvista.com> for finding
an unrelated hunk in a previous version of this patch.
Signed-off-by: NPaul Walmsley <paul@pwsan.com>
Cc: Sergei Shtylyov <sshtylyov@mvista.com>
Cc: Tero Kristo <t-kristo@ti.com>

Until the OMAP4 code is converted to disable the use of the clock
framework-based clockdomain enable/disable sequence, any clock used as
a hwmod main_clk must have a clockdomain associated with it.  This
patch populates some clock structure clockdomain names to resolve the
following warnings during kernel init:

omap_hwmod: dpll_mpu_m2_ck: missing clockdomain for dpll_mpu_m2_ck.
omap_hwmod: trace_clk_div_ck: missing clockdomain for trace_clk_div_ck.
omap_hwmod: l3_div_ck: missing clockdomain for l3_div_ck.
omap_hwmod: ddrphy_ck: missing clockdomain for ddrphy_ck.
Signed-off-by: NPaul Walmsley <paul@pwsan.com>
Cc: Rajendra Nayak <rnayak@ti.com>
Cc: Benoît Cousson <b-cousson@ti.com>

The 32k sync timer IP block target idle modes in the hwmod data are
incorrect.  The IP block does not support any smart-idle modes.
Update the data to reflect the correct modes.

This problem was initially identified and a diff fragment posted to
the lists by Benoît Cousson <b-cousson@ti.com>.  A patch description
bug in the first version was also identified by Benoît.
Signed-off-by: NPaul Walmsley <paul@pwsan.com>
Cc: Benoît Cousson <b-cousson@ti.com>
Cc: Tero Kristo <t-kristo@ti.com>

If an IP is configured in Smart-Standby-Wakeup, when disabling wakeup feature the
IP will not go back to Smart-Standby, but will remain in Smart-Standby-Wakeup.
Signed-off-by: NDjamil Elaidi <d-elaidi@ti.com>
Signed-off-by: NPaul Walmsley <paul@pwsan.com>

Pull NFS client bugfixes from Trond Myklebust:
 - Fix a write hang due to an uninitalised variable when
   !defined(CONFIG_NFS_V4)
 - Address upcall races in the legacy NFSv4 idmapper
 - Remove an O_DIRECT refcounting issue
 - Fix a pNFS refcounting bug when the file layout metadata server is
   also acting as a data server
 - Fix a pNFS module loading race.

* tag 'nfs-for-3.5-3' of git://git.linux-nfs.org/projects/trondmy/linux-nfs:
  NFS: Force the legacy idmapper to be single threaded
  NFS: Initialise commit_info.rpc_out when !defined(CONFIG_NFS_V4)
  NFS: Fix a refcounting issue in O_DIRECT
  NFSv4.1: Fix a race in set_pnfs_layoutdriver
  NFSv4.1: Fix umount when filelayout DS is also the MDS

Pull btrfs fixes from Chris Mason:
 "This is a small pull with btrfs fixes.  The biggest of the bunch is
  another fix for the new backref walking code.

  We're still hammering out one btrfs dio vs buffered reads problem, but
  that one will have to wait for the next rc."

* 'for-linus' of git://git.kernel.org/pub/scm/linux/kernel/git/mason/linux-btrfs:
  Btrfs: delay iput with async extents
  Btrfs: add a missing spin_lock
  Btrfs: don't assume to be on the correct extent in add_all_parents
  Btrfs: introduce btrfs_next_old_item

Pull hwmon fixes from Guenter Roeck:
 "Two minor fixes in emc2103 and applesmc drivers."

* tag 'hwmon-for-linus' of git://git.kernel.org/pub/scm/linux/kernel/git/groeck/linux-staging:
  hwmon: (emc2103) Fix use of an uninitilized variable in error case
  hwmon: (applesmc) Limit key length in warning messages

Rename the XFS log structure to xlog to help crash distinquish it from the
other logs in Linux.
Signed-off-by: NMark Tinguely <tinguely@sgi.com>
Reviewed-by: NChristoph Hellwig <hch@lst.de>
Signed-off-by: NBen Myers <bpm@sgi.com>

Revert commit 1307bbd2, which uses the s_umount semaphore to provide
exclusion between xfs_sync_worker and unmount, in favor of shutting down
the sync worker before freeing the log in xfs_log_unmount.  This is a
cleaner way of resolving the race between xfs_sync_worker and unmount
than using s_umount.
Signed-off-by: NBen Myers <bpm@sgi.com>
Reviewed-by: NMark Tinguely <tinguely@sgi.com>
Reviewed-by: NDave Chinner <dchinner@redhat.com>

Commit de1cbee4 which removed b_file_offset in favor of b_bn introduced a bug
causing xfs_buf_allocate_memory() to overestimate the number of necessary
pages. The problem is that xfs_buf_alloc() sets b_bn to -1 and thus effectively
every buffer is straddling a page boundary which causes
xfs_buf_allocate_memory() to allocate two pages and use vmalloc() for access
which is unnecessary.

Dave says xfs_buf_alloc() doesn't need to set b_bn to -1 anymore since the
buffer is inserted into the cache only after being fully initialized now.
So just make xfs_buf_alloc() fill in proper block number from the beginning.

CC: David Chinner <dchinner@redhat.com>
Signed-off-by: NJan Kara <jack@suse.cz>
Reviewed-by: NChristoph Hellwig <hch@lst.de>
Reviewed-by: NDave Chinner <dchinner@redhat.com>
Signed-off-by: NBen Myers <bpm@sgi.com>

When we fail to find an matching extent near the requested extent
specification during a left-right distance search in
xfs_alloc_ag_vextent_near, we fail to free the original cursor that
we used to look up the XFS_BTNUM_CNT tree and hence leak it.
Reported-by: NChris J Arges <chris.j.arges@canonical.com>
Signed-off-by: NDave Chinner <dchinner@redhat.com>
Reviewed-by: NChristoph Hellwig <hch@lst.de>
Signed-off-by: NBen Myers <bpm@sgi.com>

An inode in the AIL can be flush locked and marked stale if
a cluster free transaction occurs at the right time. The
inode item is then marked as flushing, which causes xfsaild
to spin and leaves the filesystem stalled. This is
reproduced by running xfstests 273 in a loop for an
extended period of time.

Check for stale inodes before the flush lock. This marks
the inode as pinned, leads to a log flush and allows the
filesystem to proceed.
Signed-off-by: NBrian Foster <bfoster@redhat.com>
Reviewed-by: NDave Chinner <dchinner@redhat.com>
Reviewed-by: NChristoph Hellwig <hch@lst.de>
Reviewed-by: NMark Tinguely <tinguely@sgi.com>
Signed-off-by: NBen Myers <bpm@sgi.com>

There is some concern that these iput()'s could be the final iputs and could
induce lockups on people waiting on writeback.  This would happen in the
rare case that we don't create ordered extents because of an error, but it
is theoretically possible and we already have a mechanism to deal with this
so just make them delayed iputs to negate any worry.
Signed-off-by: NJosef Bacik <josef@redhat.com>
Signed-off-by: NChris Mason <chris.mason@fusionio.com>

When fixing up the locking in the delayed ref destruction work I accidently
broke the locking myself ;(.  Add back a spin_lock that should be there and
we are now all set.  Thanks,
Btrfs: add a missing spin_lock

When fixing up the locking in the delayed ref destruction work I accidently
broke the locking myself ;(.  Add back a spin_lock that should be there and
we are now all set.  Thanks,
Reported-by: NDan Carpenter <dan.carpenter@oracle.com>
Signed-off-by: NJosef Bacik <josef@redhat.com>
Signed-off-by: NChris Mason <chris.mason@fusionio.com>

add_all_parents did assume that path is already at a correct extent data
item, which may not be true in case of data extents that were partly
rewritten and splitted.

We need to check if we're on a matching extent for every item and only
for the ones after the first. The loop is changed to do this now.

This patch also fixes a bug introduced with commit 3b127fd8 "Btrfs:
remove obsolete btrfs_next_leaf call from __resolve_indirect_ref".
The removal of next_leaf did sometimes result in slot==nritems when
the above described case happens, and thus resulting in invalid values
(e.g. wanted_obejctid) in add_all_parents (leading to missed backrefs
or even crashes).
Signed-off-by: NAlexander Block <ablock84@googlemail.com>
Signed-off-by: NJan Schmidt <list.btrfs@jan-o-sch.net>
Signed-off-by: NChris Mason <chris.mason@fusionio.com>

We introduce btrfs_next_old_item that uses btrfs_next_old_leaf instead
of btrfs_next_leaf.

btrfs_next_item is also changed to simply call btrfs_next_old_item with
time_seq being 0.
Signed-off-by: NAlexander Block <ablock84@googlemail.com>
Signed-off-by: NChris Mason <chris.mason@fusionio.com>

We need to initialize this to false, because the is_rb callback only
ever sets it to true.

Noticed while reading through the code.

Cc: stable@vger.kernel.org
Signed-Off-by: NDaniel Vetter <daniel.vetter@ffwll.ch>
Reviewed-by: NAdam Jackson <ajax@redhat.com>
Signed-off-by: NDave Airlie <airlied@redhat.com>