Summary: In G1 heap verification, we no longer scan perm to G1-collected heap refs as part of process_strong_roots() but rather in a separate explicit oop iteration over the perm gen. This preserves the original perm card-marks. Added a new assertion in younger_refs_iterate() to catch a simple subcase where the user may have forgotten a prior save_marks() call, as happened in the case of G1's attempt to iterate perm to G1 refs when verifying the heap before exit. The assert was deliberately weakened for ParNew+CMS and will be fixed for that combination in a future CR. Also made some (non-G1) cleanups related to code and comments obsoleted by the migration of Symbols to the native heap.
Reviewed-by: iveresov, jmasa, tonyp

Summary: Replaced MakeDeps and the includeDB files with more standardized solutions.
Reviewed-by: coleenp, kvn, kamg

Summary: Change all the Sun copyrights to Oracle copyright
Reviewed-by: ohair

Reviewed-by: kvn, twisti, apetrusenko, never, dcubed

Summary: Adding probes related to thread scheduling and class initialization
Reviewed-by: kamg, never

6782663: Data produced by PrintGCApplicationConcurrentTime and PrintGCApplicationStoppedTime is not accurate.
Summary: Update and display the timers associated with these flags for all safepoints.
Reviewed-by: ysr, jcoomes

Summary: If GC crashed with java thread involved, print out the java stack trace in error report
Reviewed-by: never, ysr, coleenp, dholmes

Reviewed-by: pbk, kvn

Summary: Make a special root-list for those few nmethods which might contain non-perm oops.
Reviewed-by: twisti, kvn, never, jmasa, ysr

Summary: Update copyright for files that have been modified in 2009, up to 07/09
Reviewed-by: tbell, ohair

Summary: Short-circuit gc-a-lot attempts by non-JavaThreads; SkipGCALot c'tor to elide re-entrant gc-a-lot attempts.
Reviewed-by: apetrusenko, jcoomes, jmasa, kamg