Code clean-up.

* cc/sha1-file-name:
  sha1_file: improve sha1_file_name() perfs
  sha1_file: remove static strbuf from sha1_file_name()

The tracing machinery learned to report tweaking of environment
variables as well.

* nd/trace-with-env:
  run-command.c: print new cwd in trace_run_command()
  run-command.c: print env vars in trace_run_command()
  run-command.c: print program 'git' when tracing git_cmd mode
  run-command.c: introduce trace_run_command()
  trace.c: move strbuf_release() out of print_trace_line()
  trace: avoid unnecessary quoting
  sq_quote_argv: drop maxlen parameter

Rewrite two more "git submodule" subcommands in C.

* pc/submodule-helper:
  submodule: port submodule subcommand 'deinit' from shell to C
  submodule: port submodule subcommand 'sync' from shell to C

Code clean-up.

* rb/hashmap-h-compilation-fix:
  hashmap.h: remove unused variable

Avoid showing a warning message in the middle of a line of "git
diff" output.

* nd/diff-flush-before-warning:
  diff.c: flush stdout before printing rename warnings

Code clean-up.

* tb/crlf-conv-flags:
  convert_to_git(): safe_crlf/checksafe becomes int conv_flags

Code clean-up.

* rs/describe-unique-abbrev:
  describe: use strbuf_add_unique_abbrev() for adding short hashes

Doc updates.

* ks/submodule-doc-updates:
  Doc/git-submodule: improve readability and grammar of a sentence
  Doc/gitsubmodules: make some changes to improve readability and syntax

Test clean-up.

* cl/t9001-cleanup:
  t9001: use existing helper in send-email test

Retire mru API as it does not give enough abstraction over
underlying list API to be worth it.

* gs/retire-mru:
  mru: Replace mru.[ch] with list.h implementation

The first step to getting rid of mru API and using the
doubly-linked list API directly instead.

* ot/mru-on-list:
  mru: use double-linked list from list.h

The machinery to clone & fetch, which in turn involves packing and
unpacking objects, have been told how to omit certain objects using
the filtering mechanism introduced by the jh/object-filtering
topic, and also mark the resulting pack as a promisor pack to
tolerate missing objects, taking advantage of the mechanism
introduced by the jh/fsck-promisors topic.

* jh/partial-clone:
  t5616: test bulk prefetch after partial fetch
  fetch: inherit filter-spec from partial clone
  t5616: end-to-end tests for partial clone
  fetch-pack: restore save_commit_buffer after use
  unpack-trees: batch fetching of missing blobs
  clone: partial clone
  partial-clone: define partial clone settings in config
  fetch: support filters
  fetch: refactor calculation of remote list
  fetch-pack: test support excluding large blobs
  fetch-pack: add --no-filter
  fetch-pack, index-pack, transport: partial clone
  upload-pack: add object filtering for partial clone

In preparation for implementing narrow/partial clone, the machinery
for checking object connectivity used by gc and fsck has been
taught that a missing object is OK when it is referenced by a
packfile specially marked as coming from trusted repository that
promises to make them available on-demand and lazily.

* jh/fsck-promisors:
  gc: do not repack promisor packfiles
  rev-list: support termination at promisor objects
  sha1_file: support lazily fetching missing objects
  introduce fetch-object: fetch one promisor object
  index-pack: refactor writing of .keep files
  fsck: support promisor objects as CLI argument
  fsck: support referenced promisor objects
  fsck: support refs pointing to promisor objects
  fsck: introduce partialclone extension
  extension.partialclone: introduce partial clone extension

The build procedure for perl/ part has been greatly simplified by
weaning ourselves off of MakeMaker.

* ab/simplify-perl-makefile:
  perl: treat PERLLIB_EXTRA as an extra path again
  perl: avoid *.pmc and fix Error.pm further
  Makefile: replace perl/Makefile.PL with simple make rules

Replace the custom calls to mru.[ch] with calls to list.h. This patch is
the final step in removing the mru API completely and inlining the logic.
This patch leads to significant code reduction and the mru API hence, is
not a useful abstraction anymore.
Signed-off-by: NGargi Sharma <gs051095@gmail.com>
Reviewed-by: NJeff King <peff@peff.net>
Signed-off-by: NJunio C Hamano <gitster@pobox.com>

Signed-off-by: NJunio C Hamano <gitster@pobox.com>

"git add -p" was taught to ignore local changes to submodules as
they do not interfere with the partial addition of regular changes
anyway.

* nd/add-i-ignore-submodules:
  add--interactive: ignore submodule changes except HEAD

Instead of maintaining home-grown email address parsing code, ship
a copy of reasonably recent Mail::Address to be used as a fallback
in 'git send-email' when the platform lacks it.

* mm/send-email-fallback-to-local-mail-address:
  send-email: add test for Linux's get_maintainer.pl
  perl/Git: remove now useless email-address parsing code
  send-email: add and use a local copy of Mail::Address

Doc update.

* ab/doc-cat-file-e-still-shows-errors:
  cat-file doc: document that -e will return some output

Doc update.

* as/read-tree-prefix-doc-fix:
  doc/read-tree: remove obsolete remark

Fix for a commented-out code to adjust it to a rather old API change.

* ys/bisect-object-id-missing-conversion-fix:
  bisect: debug: convert struct object to object_id

"git stash -- <pathspec>" incorrectly blew away untracked files in
the directory that matched the pathspec, which has been corrected.

* tg/stash-with-pathspec-fix:
  stash: don't delete untracked files that match pathspec

When resetting the working tree files recursively, the working tree
of submodules are now also reset to match.

* sb/submodule-update-reset-fix:
  submodule: submodule_move_head omits old argument in forced case
  unpack-trees: oneway_merge to update submodules
  t/lib-submodule-update.sh: fix test ignoring ignored files in submodules
  t/lib-submodule-update.sh: clarify test

Code clean-up.

* bw/oidmap-autoinit:
  oidmap: ensure map is initialized

"git commit --fixup" did not allow "-m<message>" option to be used
at the same time; allow it to annotate resulting commit with more
text.

* ab/commit-m-with-fixup:
  commit: add support for --fixup <commit> -m"<extra message>"
  commit doc: document that -c, -C, -F and --fixup with -m error

"perf" test output can be sent to codespeed server.

* cc/codespeed:
  perf/run: read GIT_PERF_REPO_NAME from perf.repoName
  perf/run: learn to send output to codespeed server
  perf/run: learn about perf.codespeedOutput
  perf/run: add conf_opts argument to get_var_from_env_or_config()
  perf/aggregate: implement codespeed JSON output
  perf/aggregate: refactor printing results
  perf/aggregate: fix checking ENV{GIT_PERF_SUBSECTION}

More perf tests for threaded grep

* ab/perf-grep-threads:
  perf: amend the grep tests to test grep.threads

"diff" family of commands learned "--find-object=<object-id>" option
to limit the findings to changes that involve the named object.

* sb/diff-blobfind-pickaxe:
  diff: use HAS_MULTI_BITS instead of counting bits manually
  diff: properly error out when combining multiple pickaxe options
  diffcore: add a pickaxe option to find a specific blob
  diff: introduce DIFF_PICKAXE_KINDS_MASK
  diff: migrate diff_flags.pickaxe_ignore_case to a pickaxe_opts bit
  diff.h: make pickaxe_opts an unsigned bit field

"git clone $there $here" is allowed even when here directory exists
as long as it is an empty directory, but the command incorrectly
removed it upon a failure of the operation.

* jk/abort-clone-with-existing-dest:
  clone: do not clean up directories we didn't create
  clone: factor out dir_exists() helper
  t5600: modernize style
  t5600: fix outdated comment about unborn HEAD

"git merge -Xours/-Xtheirs" learned to use our/their version when
resolving a conflicting updates to a symbolic link.

* jc/merge-symlink-ours-theirs:
  merge: teach -Xours/-Xtheirs to symbolic link merge

API clean-up around revision traversal.

* rs/lose-leak-pending:
  commit: remove unused function clear_commit_marks_for_object_array()
  revision: remove the unused flag leak_pending
  checkout: avoid using the rev_info flag leak_pending
  bundle: avoid using the rev_info flag leak_pending
  bisect: avoid using the rev_info flag leak_pending
  object: add clear_commit_marks_all()
  ref-filter: use clear_commit_marks_many() in do_merge_filter()
  commit: use clear_commit_marks_many() in remove_redundant()
  commit: avoid allocation in clear_commit_marks_many()

"git svn dcommit" did not take into account the fact that a
svn+ssh:// URL with a username@ (typically used for pushing) refers
to the same SVN repository without the username@ and failed when
svn.pushmergeinfo option is set.

* jm/svn-pushmergeinfo-fix:
  git-svn: fix svn.pushmergeinfo handling of svn+ssh usernames.

"git status" after moving a path in the working tree (hence making
it appear "removed") and then adding with the -N option (hence
making that appear "added") detected it as a rename, but did not
report the  old and new pathnames correctly.

* nd/ita-wt-renames-in-status:
  wt-status.c: handle worktree renames
  wt-status.c: rename rename-related fields in wt_status_change_data
  wt-status.c: catch unhandled diff status codes
  wt-status.c: coding style fix
  Use DIFF_DETECT_RENAME for detect_rename assignments
  t2203: test status output with porcelain v2 format

An old regression in "git describe --all $annotated_tag^0" has been
fixed.

* dk/describe-all-output-fix:
  describe: prepend "tags/" when describing tags with embedded name

* maint:
  Git 2.16.1
  t5601-clone: test case-conflicting files on case-insensitive filesystem
  repository: pre-initialize hash algo pointer

Signed-off-by: NJunio C Hamano <gitster@pobox.com>

Signed-off-by: NJunio C Hamano <gitster@pobox.com>

* bc/hash-algo:
  t5601-clone: test case-conflicting files on case-insensitive filesystem
  repository: pre-initialize hash algo pointer

A recently introduced regression caused a segfault at clone time on
case-insensitive filesystems when filenames differing only in case are
present. This bug has already been fixed (repository: pre-initialize
hash algo pointer, 2018-01-18), but it's not the first time similar
problems have arisen. Therefore, introduce a test to catch this case and
protect against future regressions.
Signed-off-by: NEric Sunshine <sunshine@sunshineco.com>
Signed-off-by: Nbrian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: NEric Sunshine <sunshine@sunshineco.com>
Signed-off-by: NJunio C Hamano <gitster@pobox.com>

There are various git subcommands (among them, clone) which don't set up
the repository (that is, they lack RUN_SETUP or RUN_SETUP_GENTLY) but
end up needing to have information about the hash algorithm in use.
Because the hash algorithm is part of struct repository and it's only
initialized in repository setup, we can end up dereferencing a NULL
pointer in some cases if we call one of these subcommands and look up
the empty blob or empty tree values.

A "git clone" of a project that has two paths that differ only in
case suffers from this if it is run on a case insensitive platform.
When the command attempts to check out one of these two paths after
checking out the other one, the checkout codepath needs to see if
the version that is already on the filesystem (which should not
happen if the FS were case sensitive) is dirty, and it needs to
exercise the hashing code at that point.

In the future, we can add a command line option for this or read it
from the configuration, but until we're ready to expose that
functionality to the user, simply initialize the repository
structure to use the current hash algorithm, SHA-1.
Signed-off-by: Nbrian m. carlson <sandals@crustytoothpaste.net>
Signed-off-by: NJunio C Hamano <gitster@pobox.com>