Summary:
Introduce `RepeatableThread` utility to run task periodically in a separate thread. It is basically the same as the the same class in fbcode, and in addition provide a helper method to let tests mock time and trigger execution one at a time.

We can use this class to replace `TimerQueue` in #4382 and `BlobDB`.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4423

Differential Revision: D10020932

Pulled By: yiwu-arbug

fbshipit-source-id: 3616bef108c39a33c92eedb1256de424b7c04087

Summary:
`FindFile()` and  `FindFileInRange()` actually works as the same
of `std::lower_bound()`. Use `std::lower_bound()` to reduce the
repeated code.

- change `FindFile()` and `FindFileInRange()` to use `std::lower_bound()`
Signed-off-by: NJiYou <jiyou09@gmail.com>
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4372

Differential Revision: D9919677

Pulled By: ajkr

fbshipit-source-id: f74aaa30e2f80e410e299c5a5bca4eaf2a7a26de

Summary:
The assert in PosixEnv::FileExists is currently based on the return value of `access` syscall. Instead it should be based on errno.

Initially I wanted to remove this assert as [`access`](https://linux.die.net/man/2/access) can error out in a few other cases (like EROFS). But on thinking more it feels like the assert is doing the right thing ...  its good to crash on EROFS, EFAULT, EINVAL, and other major filesystem related problems so that the user is immediately aware of the problems while testing.
(I think it might be ok to crash on EIO as well, but there might be a specific reason why it was decided not to crash for EIO, and I don't have that context. So letting the letting the assert checks remain as is for now).
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4427

Differential Revision: D10037200

Pulled By: sagar0

fbshipit-source-id: 5cc96116a2e53cef701f444a8b5290576f311e51

Summary:
I guess we didn't update this script when `--allow_concurrent_memtable_write` became true by default.

Fixes #4413.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4428

Differential Revision: D10036452

Pulled By: ajkr

fbshipit-source-id: f464be0642bd096d9040f82cdc3eae614a902183

Summary:
Improve log handling when avoid_flush_during_recovery=true.
1. restore total_log_size_ after recovery, by summing up existing log sizes. Fixes #4253.
2. truncate the last existing log, since this log can contain preallocated space and it will be a waste to keep the space. It avoids a crash loop of user application cause a lot of log with non-trivial size being created and ultimately take up all disk space.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4405

Differential Revision: D9953933

Pulled By: yiwu-arbug

fbshipit-source-id: 967780fee8acec7f358b6eb65190fb4684f82e56

Summary:
The CollapsedRangeDelMap was entirely mishandling tombstones at the same
sequence number when the tombstones did not have identical start and end
keys. Such tombstones are common since 90fc4069, which causes
tombstones to be split during compactions.

For example, if the tombstone [a, c) @ 1 lies across a compaction
boundary at b, it will be split into [a, b) @ 1 and [b, c) @ 1. Without
this patch, the collapsed range deletion map would look like this:

  a -> 1
  b -> 1
  c -> 0

Notice how the b -> 1 entry is redundant. When the tombstones overlap,
the problem is even worse. Consider tombstones [a, c) @ 1 and [b, d) @
1, which produces this map without this patch:

  a -> 1
  b -> 1
  c -> 0
  d -> 0

This map is corrupt, as a map can never contain adjacent sentinel (zero)
entries. When the iterator advances from b to c, it will notice that c
is a sentinel enty and skip to d--but d is also a sentinel entry! Asking
what tombstone this iterator points to will trigger an assertion, as it
is not pointing to a valid tombstone.

/cc ajkr
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4424

Differential Revision: D10039248

Pulled By: abhimadan

fbshipit-source-id: 6d737c1e88d60e80cf27286726627ba44463e7f4

Summary:
Update template of TARGETS file according to recent changes in #4371 , #4363 and https://github.com/facebook/rocksdb/commit/dbf44c314b4adf3276afc1ca797b88944ca3162c.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4426

Differential Revision: D10025053

Pulled By: yiwu-arbug

fbshipit-source-id: e6a0a702bfd401fc1af240ee446f5690f0bcd85d

Summary:
Improve time measurements for AddTombstones to only include the
call and not the VectorIterator setup. Also add a new
add_tombstones_per_run flag to call AddTombstones multiple times per
aggregator, which will help simulate more realistic workloads.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4395

Differential Revision: D9996811

Pulled By: abhimadan

fbshipit-source-id: 5865a95c323fbd9b3606493013664b4890fe5a02

Summary:
Fix IO error on read not being handle and crashing the DB. With the fix we properly return the error.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4410

Differential Revision: D9979246

Pulled By: yiwu-arbug

fbshipit-source-id: 111a85675067a29c03cb60e9a34103f4ff636694

Summary:
Make the CompactOnDeletionCollectorFactory class public, and provide
methods to update the window size and deletion trigger params. These
will take effect on subsequent created SST files.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4403

Differential Revision: D9976857

Pulled By: anand1976

fbshipit-source-id: 31dbf0511c12fa2bb9b2a7ba620079e0ee09cf48

Summary:
Add Java API `getAggregatedLongProperty(final String property)`
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4379

Differential Revision: D9921463

Pulled By: sagar0

fbshipit-source-id: a02512e1b2aff4765a10b77de9a7bf7b1909d954

Summary:
If range tombstones are generated every few writes, the
KeyGenerator's limit is now extended to account for the additional
Next() calls. This is primarily important for `filluniquerandom`
benchmarks that enforce the call limit.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4404

Differential Revision: D9949326

Pulled By: abhimadan

fbshipit-source-id: 0bdfeb2cad2098dc0b8b029236dab5e4bef25e38

Summary:
This will fix the broken asan crash test:
> Traceback (most recent call last):
  File "tools/db_crashtest.py", line 384, in <module>
    main()
  File "tools/db_crashtest.py", line 368, in main
    parser.add_argument("--" + k, type=type(v() if callable(v) else v))
  File "tools/db_crashtest.py", line 59, in <lambda>
    "index_block_restart_interval": lambda: random.choice(1, 16),
TypeError: choice() takes exactly 2 arguments (3 given)
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4397

Differential Revision: D9933041

Pulled By: miasantreble

fbshipit-source-id: 10998e5bc6b6a5cea3e4088b18465affc246e639

Summary:
The default for index_block_restart_interval is 1 but some use 16 in production. The patch extends crash test to test both values.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4383

Differential Revision: D9887304

Pulled By: maysamyabandeh

fbshipit-source-id: a8d00fea974a79ad563f9f4d9d7b069e9f746a8f

Summary:
Per #4387 this should address the validation error with the link tag.  This is a quick fix, a future iteration could significantly upgrade the jekyll integration.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4392

Differential Revision: D9923643

Pulled By: gfosco

fbshipit-source-id: e7ed478e55c907add8319290326540e6e44fc0d6

Summary:
Add a unit test for range collapsing when non-default comparator is used. This exposes the bug fixed in #4386.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4388

Differential Revision: D9918252

Pulled By: ajkr

fbshipit-source-id: 99501b96b251eab41791a7e33b27055ee36c5c39

Summary:
The Comparator passed to CollapsedRangeDelMap was not used for
operator less of the std::map `rep_` object contained in
CollapsedRangeDelMap. So the map was always sorted using the
default ByteWiseComparator, which seems wrong.

Passing the specified Comparator through for usage in that map
object fixes actual problems we were seeing with RangeDelete operations
that do not delete keys as expected when using a custom Comparator.

I found that the tests in current master crash when I run them locally,
both with and without my patch, at the very same location. I therefore
don't know if the patch breaks something else, but it seems to fix
RangeDeletion issues in our product that uses RocksDB.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4386

Differential Revision: D9916506

Pulled By: ajkr

fbshipit-source-id: 27bff8c775831f089dde8c5289df7343d88b2d66

Summary:
Value delta encoding in format_version 4 requires the differences between the size of two consecutive handles to be sent to BlockBuilder::Add. This applies not only to indexes on blocks but also the indexes on indexes and filters in partitioned indexes and filters respectively. The patch fixes a bug where the partitioned filters would encode the entire size of the handle rather than the difference of the size with the last size.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4381

Differential Revision: D9879505

Pulled By: maysamyabandeh

fbshipit-source-id: 27a22e49b482b927fbd5629dc310c46d63d4b6d1

Summary:
To measure the results of upcoming DeleteRange v2 work, this commit adds
simple benchmarks for RangeDelAggregator. It measures the average time
for AddTombstones and ShouldDelete calls.

Using this to compare the results before #4014 and on the latest master (using the default arguments) produces the following results:

Before #4014:
```
=======================
Results:
=======================
AddTombstones:          1356.28 us
ShouldDelete:           0.401732 us
```

Latest master:
```
=======================
Results:
=======================
AddTombstones:          740.82 us
ShouldDelete:           0.383271 us
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4363

Differential Revision: D9881676

Pulled By: abhimadan

fbshipit-source-id: 793e7d61aa4b9d47eb917bbcc03f08695b5e5442

Summary:
1. Add override keyword to overridden virtual functions in EventListener
2. Fix a memory corruption that can happen during DB shutdown when in
read-only mode due to a background write error
3. Fix uninitialized buffers in error_handler_test.cc that cause
valgrind to complain
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4375

Differential Revision: D9875779

Pulled By: anand1976

fbshipit-source-id: 022ede1edc01a9f7e21ecf4c61ef7d46545d0640

Summary:
- Made stress test call `Flush()` periodically according to `--flush_one_in` flag.
- Enabled by default in crash test.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4368

Differential Revision: D9838593

Pulled By: ajkr

fbshipit-source-id: fe5a6e49b36e5ea752acc3aa8be364f8ef34d9cc

Summary:
This is a follow up to #4370. The earlier comment is not correct.

Thanks to ajkr for pointing this out.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4380

Differential Revision: D9874667

Pulled By: sagar0

fbshipit-source-id: f4e092d86b29c715258210b770643d367e38caae

Summary:
Including tools/trace_analyzer_tool.cc in rocksdb_lib was causing conflicts in dependent binaries due to duplicate gflag (other_prefix).
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4371

Differential Revision: D9846953

Pulled By: anand1976

fbshipit-source-id: 80b4aa36ab8428b8f6dceb896c45532684102709

Summary:
This commit implements automatic recovery from a Status::NoSpace() error
during background operations such as write callback, flush and
compaction. The broad design is as follows -
1. Compaction errors are treated as soft errors and don't put the
database in read-only mode. A compaction is delayed until enough free
disk space is available to accomodate the compaction outputs, which is
estimated based on the input size. This means that users can continue to
write, and we rely on the WriteController to delay or stop writes if the
compaction debt becomes too high due to persistent low disk space
condition
2. Errors during write callback and flush are treated as hard errors,
i.e the database is put in read-only mode and goes back to read-write
only fater certain recovery actions are taken.
3. Both types of recovery rely on the SstFileManagerImpl to poll for
sufficient disk space. We assume that there is a 1-1 mapping between an
SFM and the underlying OS storage container. For cases where multiple
DBs are hosted on a single storage container, the user is expected to
allocate a single SFM instance and use the same one for all the DBs. If
no SFM is specified by the user, DBImpl::Open() will allocate one, but
this will be one per DB and each DB will recover independently. The
recovery implemented by SFM is as follows -
  a) On the first occurance of an out of space error during compaction,
subsequent
  compactions will be delayed until the disk free space check indicates
  enough available space. The required space is computed as the sum of
  input sizes.
  b) The free space check requirement will be removed once the amount of
  free space is greater than the size reserved by in progress
  compactions when the first error occured
  c) If the out of space error is a hard error, a background thread in
  SFM will poll for sufficient headroom before triggering the recovery
  of the database and putting it in write-only mode. The headroom is
  calculated as the sum of the write_buffer_size of all the DB instances
  associated with the SFM
4. EventListener callbacks will be called at the start and completion of
automatic recovery. Users can disable the auto recov ery in the start
callback, and later initiate it manually by calling DB::Resume()

Todo:
1. More extensive testing
2. Add disk full condition to db_stress (follow-on PR)
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4164

Differential Revision: D9846378

Pulled By: anand1976

fbshipit-source-id: 80ea875dbd7f00205e19c82215ff6e37da10da4a

Summary:
AddressSanitizer: heap-use-after-free in std::__atomic_base<bool>::load(std::memory_order) const
==1798517==ABORTING
```
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4370

Differential Revision: D9844146

Pulled By: sagar0

fbshipit-source-id: 18a2970b1d504b4f6c8fb04857f26e0f32124dd1

Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/4369

Differential Revision: D9844200

Pulled By: sagar0

fbshipit-source-id: 0d9f5f73b28234eaac55d3551ce4e2dc177af138

Summary:
Because `base_files` and `added_files` both are sorted, using a merge
operation to these two sorted arrays is more effective. The complexity
is reduced to linear time.

    - optmize the merge complexity.
    - move the `NDEBUG` of sorted `added_files` out of merge process.
Signed-off-by: NJiYou <jiyou09@gmail.com>
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4366

Differential Revision: D9833592

Pulled By: ajkr

fbshipit-source-id: dd32b67ebdca4c20e5e9546ab8082cecefe99fd0

Summary: Pull Request resolved: https://github.com/facebook/rocksdb/pull/4361

Differential Revision: D9803723

Pulled By: riversand963

fbshipit-source-id: 5a0d4cd3e57fd195571dcd5822895ee00547fa6a

Summary:
Use `static_cast<type>(var)` instead of `(type)var`.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4367

Differential Revision: D9833391

Pulled By: riversand963

fbshipit-source-id: 3d33fc2c290e7e0f3d1d45b256a881d1bc5a7df2

Summary:
Now port/win_env.cc do check error for cross device link creation.
Fixes #4364
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4365

Differential Revision: D9833144

Pulled By: ajkr

fbshipit-source-id: be7555e510f4b8d2196d843841606a6cfada7644

Summary:
The code is dead in RocksDB as `log::Reader::initial_offset_` is always zero. We should delete it so we don't have to maintain it like in #4359.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4362

Differential Revision: D9817829

Pulled By: ajkr

fbshipit-source-id: 474a2c679e5bd273b40608f3a5332931d9eefe6d

Summary:
corrected the mistyped message.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4341

Differential Revision: D9816571

Pulled By: ajkr

fbshipit-source-id: 1df0424e981a01470a638a37b925c4133d59a48b

Summary:
Please consider this small PR providing access to the `MemoryUsage::GetApproximateMemoryUsageByType` function in plain C API. Actually I'm working on Go application and now trying to investigate the reasons of high memory consumption (#4313). Go [wrappers](https://github.com/tecbot/gorocksdb) are built on the top of Rocksdb C API. According to the #706, `MemoryUsage::GetApproximateMemoryUsageByType` is considered as the best option to get database internal memory usage stats, but it wasn't supported in C API yet.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4340

Differential Revision: D9655135

Pulled By: ajkr

fbshipit-source-id: a3d2f3f47c143ae75862fbcca2f571ea1b49e14a

Summary:
With #3983 the size of IndexBlockIter was increased. This had resulted in a regression on P50 latencies in one of our benchmarks. The patch reduces IndexBlockIter size be eliminating active_comparator_ field from the class.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4358

Differential Revision: D9781737

Pulled By: maysamyabandeh

fbshipit-source-id: 71e2b28d90ff0813db9e04b737ae73e185583c52

Summary: Initialize uninitialized std::atomic variables

Reviewed By: yfeldblum

Differential Revision: D9758050

fbshipit-source-id: 865d89eddafc81f3cab6f11e2ebb669f7ff70d04

Summary:
Before the fix:
On a PowerPC machine, run the following
```
$ make jtest
```
The command will fail due to "undefined symbol: crc32c_ppc". It was caused by
'rocksdbjava' Makefile target not including crc32c_ppc object files when
generating the shared lib. The fix is simple.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4357

Differential Revision: D9779474

Pulled By: riversand963

fbshipit-source-id: 3c5ec9068c2b9c796e6500f71cd900267064fd51

Summary: Build file formatting

Reviewed By: mzlee

Differential Revision: D9728238

fbshipit-source-id: 99a266d5d2260eabfd63a200b2994c6850b59cf4

Summary:
`RangeDelAggregator::AddTombstones` contained an assertion which stated that, if a range tombstone extended past the largest key in the sstable, then `FileMetaData::largest` must have a sentinel sequence number of `kMaxSequenceNumber`, which implies that the tombstone's end key is safe to truncate. However, `largest` will not be a sentinel key when the next sstable in the level's smallest key is equal to the current sstable's largest key, which caused the assertion to fail.

The assertion must hold for the truncation to be safe, so it has been moved to an additional check on end-key truncation.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4356

Differential Revision: D9760891

Pulled By: abhimadan

fbshipit-source-id: 7c20c3885cd919dcd14f291f88fd27aa33defebc

Summary:
TransactionOptions::skip_concurrency_control allows pessimistic transactions to skip the overhead of concurrency control. This could be as an optimization if the application knows that the transaction would not have any conflict with concurrent transactions. It is currently used during recovery assuming (i) application guarantees no conflict between prepared transactions in the WAL (ii) application guarantees that recovered transactions will be rolled back/commit before new transactions start.
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4346

Differential Revision: D9759149

Pulled By: maysamyabandeh

fbshipit-source-id: f896e84fa58b0b584be904c7fd3883a41ea3215b

Summary:
without this change, rocksdb_env_librados_test fails to build.

it's a regression introduced by 64324e32Signed-off-by: NKefu Chai <tchaikov@gmail.com>
Pull Request resolved: https://github.com/facebook/rocksdb/pull/4354

Differential Revision: D9702665

Pulled By: riversand963

fbshipit-source-id: 65134eaff0543733210edfc77f89c96709da7a3f