[RocksDB][Bug] Look at all the files, not just the first file in TransactionLogIter as BatchWrites can leave it in Limbo

Summary:
Transaction Log Iterator did not move to the next file in the series if there was a write batch at the end of the currentFile.
The solution is if the last seq no. of the current file is < RequestedSeqNo. Assume the first seqNo. of the next file has to satisfy the request.

Also major refactoring around the code. Moved opening the logreader to a seperate function, got rid of goto.

Test Plan: added a unit test for it.

Reviewers: dhruba, heyongqiang

Reviewed By: heyongqiang

CC: leveldb, emayanke

Differential Revision: https://reviews.facebook.net/D10029

Summary: The crash_test depends on db_stress to work with pre-existing dir

Test Plan: make db_stress; Run db_stress with 'destroy_db_initially=0'

Reviewers: vamsi, dhruba

Reviewed By: dhruba

CC: leveldb

Differential Revision: https://reviews.facebook.net/D10041

Summary: For sanity w.r.t. the way we split up the reopens equally among the ops/thread

Test Plan: make db_stress; db_stress --ops_per_thread=10 --reopens=10 => error

Reviewers: vamsi, dhruba

Reviewed By: dhruba

CC: leveldb

Differential Revision: https://reviews.facebook.net/D10023

Summary: Renames in the Makefile. It will be used like this in third-party.

Test Plan: make

Reviewers: dhruba, sheki, heyongqiang, haobo

Reviewed By: heyongqiang

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9633

Summary:
TableAndFile was a struct used earlier to delete the file as we did not have std::unique_ptr in the codebase.
With Chip introducing C++11 hotness like std::unique_ptr we can do away with the struct.

Test Plan: make all check

Reviewers: haobo, heyongqiang

Reviewed By: heyongqiang

CC: dhruba, leveldb

Differential Revision: https://reviews.facebook.net/D9975

Summary:
1. The stock LRUCache nukes itself whenever the working set (the total number of entries not released by client at a certain time) is bigger than the cache capacity.
See https://our.dev.facebook.com/intern/tasks/?t=2252281
2. There's a bug in shard calculation leading to segmentation fault when only one shard is needed.

Test Plan: make check

Reviewers: dhruba, heyongqiang

Reviewed By: heyongqiang

CC: leveldb, zshao, sheki

Differential Revision: https://reviews.facebook.net/D9927

Summary:
When I run db_crashtest, I am seeing lot of warnings that say db_stress completed
before it was killed. To fix that I made ops per thread a very large value so that it keeps
running until it is killed.

I also set #reopens to 0. Since we are killing the process anyway, the 'simulated crash'
that happens during reopen may not add additional value.

I usually see 10-25K ops happening before the kill. So I increased max_key from 100 to
1000 so that we use more distinct keys.

Test Plan:
Ran a few times.

Revert Plan: OK

Task ID: #

Reviewers: emayanke

Reviewed By: emayanke

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9909

Test Plan: make all check

Reviewers: sheki

Reviewed By: sheki

Differential Revision: https://reviews.facebook.net/D9915

Summary:
During recovery, last_updated_manifest number was not set if there were no records in the Write-ahead log.
Now check for the recovered manifest also and set last_updated_manifest file to the max value.

Test Plan: unit test

Reviewers: heyongqiang

Reviewed By: heyongqiang

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9891

Summary:
As title.
Code is shorter and cleaner
See https://our.dev.facebook.com/intern/tasks/?t=2233981

Test Plan: make check

Reviewers: dhruba, heyongqiang

Reviewed By: dhruba

CC: leveldb, zshao

Differential Revision: https://reviews.facebook.net/D9789

Summary:
1. SetBackgroundThreads was not thread safe
2. queue_size_ does not seem necessary
3. moved condition signal after shared state change. Even though the original
   order is in practice ok (because the mutex is still held), it looks fishy
   and non-intuitive.

Test Plan: make check

Reviewers: dhruba

Reviewed By: dhruba

CC: leveldb, zshao

Differential Revision: https://reviews.facebook.net/D9825

Summary: The script runs and kills the stress test periodically. Default values have been used in the script now. Should I make this a part of the Makefile or automated rocksdb build? The values can be easily changed in the script right now, but should I add some support for variable values or input to the script? I believe the script achieves its objective of unsafe crashes and reopening to expect sanity in the database.

Test Plan: python tools/db_crashtest.py

Reviewers: dhruba, vamsi, MarkCallaghan

Reviewed By: vamsi

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9369

Summary:
If a class owns an object:
 - If the object can be null => use a unique_ptr. no delete
 - If the object can not be null => don't even need new, let alone delete
 - for runtime sized array => use vector, no delete.

Test Plan: make check

Reviewers: dhruba, heyongqiang

Reviewed By: heyongqiang

CC: leveldb, zshao, sheki, emayanke, MarkCallaghan

Differential Revision: https://reviews.facebook.net/D9783

Summary:
RocksDB does a binary search to look at the files which might contain the requested sequence number at the call GetUpdatesSince.
There was a bug in the binary search => when the file pointed by the middle index of bsearch was empty/corrupt it needst to resize the vector and update indexes.
This now fixes that.

Test Plan: existing unit tests pass.

Reviewers: heyongqiang, dhruba

Reviewed By: heyongqiang

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9777

Summary:
If the vector returned by GetUpdatesSince is empty, it is still returned to the
user. This causes it throw an std::range error.
The probable file list is checked and it returns an IOError status instead of OK now.

Test Plan: added a unit test.

Reviewers: dhruba, heyongqiang

Reviewed By: heyongqiang

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9771

Summary:
Use non mmapd files for Write-Ahead log.
Earlier use of MMaped files. made the log iterator read ahead and miss records.
Now the reader and writer will point to the same physical location.

There is no perf regression :
./db_bench --benchmarks=fillseq --db=/dev/shm/mmap_test --num=$(million 20) --use_existing_db=0 --threads=2
with This diff :
fillseq      :      10.756 micros/op 185281 ops/sec;   20.5 MB/s
without this dif :
fillseq      :      11.085 micros/op 179676 ops/sec;   19.9 MB/s

Test Plan: unit test included

Reviewers: dhruba, heyongqiang

Reviewed By: heyongqiang

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9741

Summary:
Earlier Statistics object was a raw pointer. This meant the user had to clear up
the Statistics object after creating the database. In most use cases the database is created in a function and the statistics pointer is out of scope. Hence the statistics object would never be deleted.
Now Using a shared_ptr to manage this.

Want this in before the next release.

Test Plan: make all check.

Reviewers: dhruba, emayanke

Reviewed By: emayanke

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9735

Summary: rocksdb uses a single global lock to protect in memory metadata. We should minimize the mutex protected code section to increase the effective parallelism of the program. See https://our.intern.facebook.com/intern/tasks/?t=2218928

Test Plan:
make check
db_bench

Reviewers: dhruba, heyongqiang

CC: zshao, leveldb

Differential Revision: https://reviews.facebook.net/D9705

Summary:
Syntax:

   manifest_dump [--verbose] --num=<manifest_num>

e.g.

$ ./ldb --db=/home/smarlow/tmp/testdb manifest_dump --num=12
manifest_file_number 13 next_file_number 14 last_sequence 3 log_number
11  prev_log_number 0
--- level 0 --- version# 0 ---
 6:116['a1' @ 1 : 1 .. 'a1' @ 1 : 1]
 10:130['a3' @ 2 : 1 .. 'a4' @ 3 : 1]
--- level 1 --- version# 0 ---
--- level 2 --- version# 0 ---
--- level 3 --- version# 0 ---
--- level 4 --- version# 0 ---
--- level 5 --- version# 0 ---
--- level 6 --- version# 0 ---

Test Plan: - Tested on an example DB (see output in summary)

Reviewers: sheki, dhruba

Reviewed By: sheki

CC: leveldb, heyongqiang

Differential Revision: https://reviews.facebook.net/D9609

Summary:
The unit test fails as our solution does not work with MMap'd files.
Disable the failing unit test. Put it back with the next diff which should fix the problem.

Test Plan: db_test

Reviewers: heyongqiang

CC: dhruba

Differential Revision: https://reviews.facebook.net/D9645

Summary:
* Add a method to check if the log reader is at EOF.
* If we know a record has been flushed force the log_reader to believe it is not at EOF, using a new method UnMarkEof().

This does not work with MMpaed files.

Test Plan: added a unit test.

Reviewers: dhruba, heyongqiang

Reviewed By: heyongqiang

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9567

Summary: This caused compilation problems on some gcc platforms during the third-partyrelease

Test Plan: make

Reviewers: sheki

Reviewed By: sheki

Differential Revision: https://reviews.facebook.net/D9627

Summary: simple sed command to replace NULL in tools directory. Was missed by the previous codemod.

Test Plan: it compiles

Reviewers: emayanke

Reviewed By: emayanke

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9621

Summary:
The events that trigger compaction:
* opening the database
* Get -> only if seek compaction is not disabled and other checks are true
* MakeRoomForWrite -> when memtable is full
* BackgroundCall ->
  If the background thread is about to do a compaction run, it schedules
  a new background task to trigger a possible compaction. This will cause
  additional background threads to find and process other compactions that
  can run concurrently.

Test Plan: ran db_bench with overwrite and readonly alternatively.

Reviewers: sheki, MarkCallaghan

Reviewed By: sheki

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9579

Summary:
This patch allows an application to specify whether to use bufferedio,
reads-via-mmaps and writes-via-mmaps per database. Earlier, there
was a global static variable that was used to configure this functionality.

The default setting remains the same (and is backward compatible):
 1. use bufferedio
 2. do not use mmaps for reads
 3. use mmap for writes
 4. use readaheads for reads needed for compaction

I also added a parameter to db_bench to be able to explicitly specify
whether to do readaheads for compactions or not.

Test Plan: make check

Reviewers: sheki, heyongqiang, MarkCallaghan

Reviewed By: sheki

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9429

Summary:

Test Plan:

Reviewers:

CC:

Task ID: #

Blame Rev:

Summary: Getting rid of boost in our github codebase which caused problems on third-party

Test Plan: make ldb; python tools/ldb_test.py

Reviewers: sheki, dhruba

Reviewed By: sheki

Differential Revision: https://reviews.facebook.net/D9543

Summary: Was causing error(warning) in third-party saying unused result

Test Plan: make

Reviewers: sheki, dhruba

Reviewed By: dhruba

Differential Revision: https://reviews.facebook.net/D9447

Summary: Some comparisons left in log_test.cc and db_test.cc complained by make

Test Plan: make

Reviewers: dhruba, sheki

Reviewed By: dhruba

Differential Revision: https://reviews.facebook.net/D9537

Summary: Makefile had options to ignore sign-comparisons and unused-parameters, which should be there. Also fixed the specific errors in the code-base

Test Plan: make

Reviewers: chip, dhruba

Reviewed By: dhruba

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9531

Summary:
Add --benchmarks=levelstats option to report per-level stats (#files, #bytes)
Change readwhilewriting test to report response time for writes but exclude
them from the stats merged by all threads.
Prevent "NaN" in stats output by preventing division by 0.
Remove "o" file I committed by mistake.

Task ID: #

Blame Rev:

Test Plan:
make check

Revert Plan:

Database Impact:

Memcache Impact:

Other Notes:

EImportant:

- begin *PUBLIC* platform impact section -
Bugzilla: #
- end platform impact -

Reviewers: dhruba

Reviewed By: dhruba

Differential Revision: https://reviews.facebook.net/D9513

Summary:
Rocksdb can create 0 sized log files when it is opened and closed without any operations.
The GetUpdatesSince fails currently if there is a log file of size zero.

This diff fixes this. If there is a log file is 0, it is removed form the probable_file_list

Test Plan: unit test

Reviewers: dhruba, heyongqiang

Reviewed By: heyongqiang

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9507

Summary:
Instead of checking for number of files in L0. Check for number of files in the requested level.

Bug introduced in D4929 (diff trying to do too many things).

Test Plan: db_test.

Reviewers: dhruba, MarkCallaghan

Reviewed By: dhruba

Differential Revision: https://reviews.facebook.net/D9483

Summary: negation of the condition checked currently had to be checkd actually

Test Plan: make ldb; python ldb_test.py

Reviewers: sheki, dhruba

Reviewed By: sheki

Differential Revision: https://reviews.facebook.net/D9459

Summary: boost functions cause complications while deploying to third-party

Test Plan: make

Reviewers: sheki, dhruba

Reviewed By: sheki

Differential Revision: https://reviews.facebook.net/D9441

Summary:
Add --benchmarks=updaterandom for read-modify-write workloads. This is different
from --benchmarks=readrandomwriterandom in a few ways. First, an "operation" is the
combined time to do the read & write rather than treating them as two ops. Second,
the same key is used for the read & write.

Change RandomGenerator to support rows larger than 1M. That was using "assert"
to fail and assert is compiled-away when -DNDEBUG is used.

Add more options to db_bench
--duration - sets the number of seconds for tests to run. When not set the
operation count continues to be the limit. This is used by random operation
tests.

--use_snapshot - when set GetSnapshot() is called prior to each random read.
This is to measure the overhead from using snapshots.

--get_approx - when set GetApproximateSizes() is called prior to each random
read. This is to measure the overhead for a query optimizer.

Task ID: #

Blame Rev:

Test Plan:
run db_bench

Revert Plan:

Database Impact:

Memcache Impact:

Other Notes:

EImportant:

- begin *PUBLIC* platform impact section -
Bugzilla: #
- end platform impact -

Reviewers: dhruba

Reviewed By: dhruba

Differential Revision: https://reviews.facebook.net/D9267

Summary: Updated TOOL_CHAIN_LIB_BASE to use the third-party version for jemalloc-3.3.1 which contains a bug fix in quarantine.cc. This was detected while debugging valgrind issues with the rocksdb table_test

Test Plan: make table_test;valgrind --leak-check=full ./table_test

Reviewers: dhruba, sheki, vamsi

Reviewed By: sheki

Differential Revision: https://reviews.facebook.net/D9387

Summary:
Ftruncate does not throw an error on disk-full. This causes Sig-bus in
the case where the database tries to issue a Put call on a full-disk.

Use posix_fallocate for allocation instead of truncate.
Add a check to use MMaped files only on ext4, xfs and tempfs, as
posix_fallocate is very slow on ext3 and older.

Test Plan: make all check

Reviewers: dhruba, chip

Reviewed By: dhruba

CC: adsharma, leveldb

Differential Revision: https://reviews.facebook.net/D9291

Summary: ldb_test.py did a lot of assertFalse checks and displayed all the failed messages on the std output making it confusing to tell a successful from a failed run. Also many empty lines used to be needlessly printed. Also added some progression-"feel-good" lines in the tests

Test Plan: python ldb_test.py

Reviewers: dhruba, sheki, dilipj, chip

Reviewed By: dilipj

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9297

Summary: Fix for memory leaks in rocksdb tests. Also modified the variable NUM_FAILED_TESTS to print the actual number of failed tests.

Test Plan: make <test>; valgrind --leak-check=full ./<test>

Reviewers: sheki, dhruba

Reviewed By: sheki

CC: leveldb

Differential Revision: https://reviews.facebook.net/D9333