[FLINK-16878][e2e][table] Fix dependency shading of table modules test failure after FLINK-14338

This closes #11575

flink-end-to-end-tests/test-scripts/test_table_shaded_dependencies.sh

@@ -61,6 +61,8 @@ function checkCodeDependencies {
       grep -v "^\s*\-> org.json" |\
       grep -v "^\s*\-> org.apache.tapestry5.json." |\
       grep -v "^\s*\-> org.codehaus.jettison" |\
+      grep -v "^\s*\-> org.apiguardian.api" |\
+      grep -v "^\s*\-> org.apache.commons.io.input" |\
       grep -v "^\s*\-> net.minidev.json" > $CONTENTS_FILE
   if [[ `cat $CONTENTS_FILE | wc -l` -eq '0' ]]; then
       echo "Success: There are no unwanted dependencies in the ${JAR} jar."