[FLINK-3459] [build] Fix conflicting dependencies commons-collections, commons-beanutils and commons-beanutils-core

The Hadoop dependencies have a dependency on commons-configuration which pulls in transitively the commons-collection, commons-beanutils and common-beanutils-core depedencies. Commons-beanutils and commons-collection contain classes which live in the same namespace. They are also binary compatible but not binary identical. This is a problem for the sbt assembly plugin which checks for binary identity. In order to solve the problem, we bump the commons-configuration version to 1.7 so that only commons-beanutils is pulled in. This is necessary, because the transitive promotion of dependencies of the shade plugin only excludes the commons-beanutils dependency only from the directly depending dependency. All parent dependencies won't have the exclusion. This is a problem for SBT which will pull the dependency as part of one of the parents, then. Moreover, we replace commons-beanutils by commons-beanutils-bean-collections which contains only the non-conflicting classes wrt commons-collections.

This closes #1682.