The paths for .htaccess, config.php and config_override.php should

be absolute because there may be some files with the same names
deeper in the path structure.

SugarCRM.gitignore

 ## SugarCRM
 # Ignore custom .htaccess stuff.
-.htaccess
+/.htaccess
 # Ignore large parts of the annoying cache directory without breaking things.
 cache/csv/*
 cache/dashlets/*
@@ -16,8 +16,8 @@ cache/smarty/cache/*
 cache/smarty/templates_c/*
 cache/xml/*
 # Custom configuration should also be ignored.
-config.php
-config_override.php
+/config.php
+/config_override.php
 # The silent upgrade scripts aren't needed.
 silentUpgrade*.php
 # Logs files can safely be ignored.