未验证 提交 ae2b3cdc 编写于 作者: K kolinwei 提交者: GitHub

Merge pull request #1 from PaddlePaddle/develop

 Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle

要显示的变更太多。

To preserve performance only 1000 of 1000+ files are displayed.
from __future__ import absolute_import
from __future__ import print_function
from __future__ import unicode_literals
import argparse
import io, re
import sys, os
import subprocess
import platform
COPYRIGHT = '''
Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved.
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
'''
LANG_COMMENT_MARK = None
NEW_LINE_MARK = None
COPYRIGHT_HEADER = None
if platform.system() == "Windows":
NEW_LINE_MARK = "\r\n"
else:
NEW_LINE_MARK = '\n'
COPYRIGHT_HEADER = COPYRIGHT.split(NEW_LINE_MARK)[1]
p = re.search('(\d{4})', COPYRIGHT_HEADER).group(0)
process = subprocess.Popen(["date", "+%Y"], stdout=subprocess.PIPE)
date, err = process.communicate()
date = date.decode("utf-8").rstrip("\n")
COPYRIGHT_HEADER = COPYRIGHT_HEADER.replace(p, date)
def generate_copyright(template, lang='C'):
if lang == 'Python':
LANG_COMMENT_MARK = '#'
else:
LANG_COMMENT_MARK = "//"
lines = template.split(NEW_LINE_MARK)
BLANK = " "
ans = LANG_COMMENT_MARK + BLANK + COPYRIGHT_HEADER + NEW_LINE_MARK
for lino, line in enumerate(lines):
if lino == 0 or lino == 1 or lino == len(lines) - 1: continue
if len(line) == 0:
BLANK = ""
else:
BLANK = " "
ans += LANG_COMMENT_MARK + BLANK + line + NEW_LINE_MARK
return ans + "\n"
def lang_type(filename):
if filename.endswith(".py"):
return "Python"
elif filename.endswith(".h"):
return "C"
elif filename.endswith(".c"):
return "C"
elif filename.endswith(".hpp"):
return "C"
elif filename.endswith(".cc"):
return "C"
elif filename.endswith(".cpp"):
return "C"
elif filename.endswith(".cu"):
return "C"
elif filename.endswith(".cuh"):
return "C"
elif filename.endswith(".go"):
return "C"
elif filename.endswith(".proto"):
return "C"
else:
print("Unsupported filetype %s", filename)
exit(0)
PYTHON_ENCODE = re.compile("^[ \t\v]*#.*?coding[:=][ \t]*([-_.a-zA-Z0-9]+)")
def main(argv=None):
parser = argparse.ArgumentParser(
description='Checker for copyright declaration.')
parser.add_argument('filenames', nargs='*', help='Filenames to check')
args = parser.parse_args(argv)
retv = 0
for filename in args.filenames:
fd = io.open(filename, encoding="utf-8")
first_line = fd.readline()
second_line = fd.readline()
if "COPYRIGHT (C)" in first_line.upper(): continue
if first_line.startswith("#!") or PYTHON_ENCODE.match(
second_line) != None or PYTHON_ENCODE.match(first_line) != None:
continue
original_contents = io.open(filename, encoding="utf-8").read()
new_contents = generate_copyright(
COPYRIGHT, lang_type(filename)) + original_contents
print('Auto Insert Copyright Header {}'.format(filename))
retv = 1
with io.open(filename, 'w') as output_file:
output_file.write(new_contents)
return retv
if __name__ == '__main__':
exit(main())
paddle/operators/check_t.save
paddle/operators/check_tensor.ls
paddle/operators/tensor.save
python/paddle/v2/fluid/tests/book/image_classification_resnet.inference.model/
python/paddle/v2/fluid/tests/book/image_classification_vgg.inference.model/
python/paddle/v2/fluid/tests/book/label_semantic_roles.inference.model/
*.DS_Store
build/
build_doc/
......@@ -19,13 +25,3 @@ third_party/
# clion workspace.
cmake-build-*
# generated while compiling
python/paddle/v2/fluid/core.so
paddle/pybind/pybind.h
CMakeFiles
cmake_install.cmake
paddle/.timestamp
python/paddlepaddle.egg-info/
paddle/pybind/pybind.h
python/paddle/version.py
repos:
- repo: https://github.com/Lucas-C/pre-commit-hooks.git
sha: v1.0.1
hooks:
......@@ -25,9 +26,25 @@
entry: bash ./.clang_format.hook -i
language: system
files: \.(c|cc|cxx|cpp|cu|h|hpp|hxx|proto)$
- repo: local
hooks:
- id: cpplint-cpp-source
name: cpplint
description: Check C++ code style using cpplint.py.
entry: bash ./tools/codestyle/cpplint_pre_commit.hook
language: system
files: \.(c|cc|cxx|cpp|cu|h|hpp|hxx)$
- repo: https://github.com/PaddlePaddle/pre-commit-golang
sha: 8337620115c25ff8333f1b1a493bd031049bd7c0
hooks:
- id: go-fmt
types:
- go
- repo: local
hooks:
- id: copyright_checker
name: copyright_checker
entry: python ./.copyright.hook
language: system
files: \.(c|cc|cxx|cpp|cu|h|hpp|hxx|proto|py)$
exclude: (?!.*third_party)^.*$ | (?!.*book)^.*$
......@@ -4,13 +4,17 @@ cache:
- $HOME/.ccache
- $HOME/.cache/pip
- $TRAVIS_BUILD_DIR/build/third_party
- $TRAVIS_BUILD_DIR/build_android/third_party
sudo: required
dist: trusty
services:
- docker
os:
- linux
env:
- JOB=build_doc
- JOB=check_style
- JOB=build_android
addons:
apt:
packages:
......@@ -30,7 +34,7 @@ addons:
- automake
- libtool
- ccache
ssh_known_hosts: 52.76.173.135
ssh_known_hosts: 13.229.163.131
before_install:
- if [[ "$JOB" == "check_style" ]]; then sudo ln -s /usr/bin/clang-format-3.8 /usr/bin/clang-format; fi
# Paddle is using protobuf 3.1 currently. Protobuf 3.2 breaks the compatibility. So we specify the python
......@@ -41,8 +45,10 @@ before_install:
function timeout() { perl -e 'alarm shift; exec @ARGV' "$@"; }
script:
- |
timeout 2580 paddle/scripts/travis/${JOB}.sh # 43min timeout
RESULT=$?; if [ $RESULT -eq 0 ] || [ $RESULT -eq 142 ]; then true ;else exit 1; fi;
# 43min timeout
if [[ "$JOB" == "build_android" ]]; then timeout 2580 docker run -it --rm -v "$TRAVIS_BUILD_DIR:/paddle" paddlepaddle/paddle:latest-dev-android;
else timeout 2580 paddle/scripts/travis/${JOB}.sh; fi;
RESULT=$?; if [ $RESULT -eq 0 ] || [ $RESULT -eq 142 ]; then true; else exit 1; fi;
- |
if [[ "$JOB" != "build_doc" ]]; then exit 0; fi;
if [[ "$TRAVIS_PULL_REQUEST" != "false" ]]; then exit 0; fi;
......@@ -50,7 +56,7 @@ script:
export DEPLOY_DOCS_SH=https://raw.githubusercontent.com/PaddlePaddle/PaddlePaddle.org/master/scripts/deploy/deploy_docs.sh
export DOCS_DIR=`pwd`
cd ..
curl $DEPLOY_DOCS_SH | bash -s $CONTENT_DEC_PASSWD $TRAVIS_BRANCH $DOCS_DIR $DOCS_DIR/build/doc
curl $DEPLOY_DOCS_SH | bash -s $CONTENT_DEC_PASSWD $TRAVIS_BRANCH $DOCS_DIR $DOCS_DIR/build/doc/
notifications:
email:
on_success: change
......
| Github account | name |
|---|---|
| abhinavarora | Abhinav Arora |
| backyes | Yan-Fei Wang |
| beckett1124 | Bin Qi |
| Canpio | Jia-Yi Feng |
| JiayiFeng | Jia-Yi Feng |
| chengxiaohua1105 | Xiao-Hua Cheng |
| cxwangyi, yiwangbaidu, wangkuiyi | Yi Wang |
| cxysteven | Xing-Yi Cheng |
......
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
......@@ -19,7 +19,7 @@ set(PADDLE_BINARY_DIR ${CMAKE_CURRENT_BINARY_DIR})
include(system)
project(paddle CXX C Go)
project(paddle CXX C)
message(STATUS "CXX compiler: ${CMAKE_CXX_COMPILER}, version: "
"${CMAKE_CXX_COMPILER_ID} ${CMAKE_CXX_COMPILER_VERSION}")
message(STATUS "C compiler: ${CMAKE_C_COMPILER}, version: "
......@@ -31,18 +31,16 @@ if(NOT CMAKE_CROSSCOMPILING)
endif(NOT CMAKE_CROSSCOMPILING)
find_package(Git REQUIRED)
find_package(Threads REQUIRED)
if(NOT ANDROID AND NOT IOS)
find_package(Boost QUIET)
endif()
include(simd)
################################ Configurations #######################################
option(WITH_GPU "Compile PaddlePaddle with NVIDIA GPU" ${CUDA_FOUND})
option(WITH_AMD_GPU "Compile PaddlePaddle with AMD GPU" OFF)
option(WITH_AVX "Compile PaddlePaddle with AVX intrinsics" ${AVX_FOUND})
option(WITH_MKL "Compile PaddlePaddle with MKL support." ${AVX_FOUND})
option(WITH_DSO "Compile PaddlePaddle with dynamic linked CUDA" ON)
option(WITH_TESTING "Compile PaddlePaddle with unit testing" ON)
option(WITH_TESTING "Compile PaddlePaddle with unit testing" OFF)
option(WITH_SWIG_PY "Compile PaddlePaddle with inference api" ON)
option(WITH_STYLE_CHECK "Compile PaddlePaddle with style check" ON)
option(WITH_PYTHON "Compile PaddlePaddle with python interpreter" ON)
......@@ -55,12 +53,14 @@ option(WITH_COVERAGE "Compile PaddlePaddle with code coverage" OFF)
option(COVERALLS_UPLOAD "Package code coverage data to coveralls" OFF)
option(ON_TRAVIS "Exclude special unit test on Travis CI" OFF)
option(WITH_C_API "Compile PaddlePaddle with C-API(Prediction)" OFF)
option(WITH_FLUID_ONLY "Compile PaddlePaddle fluid only" OFF)
option(WITH_GOLANG "Compile PaddlePaddle with GOLANG" OFF)
option(GLIDE_INSTALL "Download and install go dependencies " ON)
option(USE_NNPACK "Compile PaddlePaddle with NNPACK library" OFF)
option(WITH_DISTRIBUTE "Compile with grpc distributed support" OFF)
option(USE_EIGEN_FOR_BLAS "Use matrix multiplication in Eigen" OFF)
option(WITH_ARM_FP16 "Use half precision support on armv8.2-a cpu" OFF)
option(WITH_FAST_BUNDLE_TEST "Bundle tests that can be run in a single process together to reduce launch overhead" OFF)
# CMAKE_BUILD_TYPE
if(NOT CMAKE_BUILD_TYPE)
......@@ -107,6 +107,10 @@ if (WITH_C_API AND WITH_PYTHON)
"different Python interpreter from compiling.")
endif()
if (WITH_C_API)
set(WITH_FLUID_ONLY OFF CACHE STRING "Disable install fluid when compile the C_API" FORCE)
endif()
if(MOBILE_INFERENCE)
set(THIRD_PARTY_BUILD_TYPE MinSizeRel)
else()
......@@ -134,14 +138,18 @@ include(external/openblas) # download, build, install openblas
include(external/mkldnn) # download, build, install mkldnn
include(external/swig) # download, build, install swig
include(external/warpctc) # download, build, install warpctc
include(external/boost) # download boost
include(external/any) # download libn::any
include(external/eigen) # download eigen3
include(external/pybind11) # download pybind11
include(external/nccl)
include(external/cares)
include(external/grpc)
include(external/snappy) # download snappy
include(external/snappystream)
include(external/threadpool)
include(cudnn) # set cudnn libraries, must before configure
include(cupti)
include(configure) # add paddle env configuration
include(generic) # simplify cmake module
include(package) # set paddle packages
......@@ -152,27 +160,33 @@ include(rdma) # set rdma libraries
include(flags) # set paddle compile flags
include(version) # set PADDLE_VERSION
include(coveralls) # set code coverage
include(inference_lib) # add paddle fluid inference libraries
include_directories("${PADDLE_SOURCE_DIR}")
include_directories("${PADDLE_SOURCE_DIR}/paddle/cuda/include")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/proto")
include_directories("${CMAKE_CURRENT_BINARY_DIR}/go/pserver/client/c")
include_directories(${Boost_INCLUDE_DIRS})
set(EXTERNAL_LIBS
${GFLAGS_LIBRARIES}
${GLOG_LIBRARIES}
gflags
glog
${CBLAS_LIBRARIES}
${PROTOBUF_LIBRARY}
${ZLIB_LIBRARIES}
protobuf
zlib
${PYTHON_LIBRARIES}
)
if(WITH_GPU)
include(cuda)
include(cuda)
include(tensorrt)
endif(WITH_GPU)
if(WITH_AMD_GPU)
find_package(HIP)
include(hip)
endif(WITH_AMD_GPU)
if(WITH_MKLML)
list(APPEND EXTERNAL_LIBS ${MKLML_IOMP_LIB})
endif()
......@@ -197,17 +211,18 @@ endif()
# "add_subdirectory(paddle)" and "add_subdirectory(python)" should be
# placed after this block, because they depends on it.
if(WITH_GOLANG)
enable_language(Go)
add_subdirectory(go)
endif(WITH_GOLANG)
set(PADDLE_PYTHON_BUILD_DIR "${CMAKE_CURRENT_BINARY_DIR}/python/build")
SET(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-O3 -g -DNDEBUG")
SET(CMAKE_C_FLAGS_RELWITHDEBINFO "-O3 -g -DNDEBUG")
set(CMAKE_CXX_FLAGS_RELWITHDEBINFO "-O3 -g -DNDEBUG")
set(CMAKE_C_FLAGS_RELWITHDEBINFO "-O3 -g -DNDEBUG")
add_subdirectory(paddle)
if(WITH_PYTHON)
add_subdirectory(python)
add_subdirectory(python)
endif()
if(WITH_DOC)
......
# Contributor Covenant Code of Conduct
## Our Pledge
In the interest of fostering an open and welcoming environment, we as contributors and maintainers pledge to making participation in our project and our community a harassment-free experience for everyone, regardless of age, body size, disability, ethnicity, gender identity and expression, level of experience, nationality, personal appearance, race, religion, or sexual identity and orientation.
## Our Standards
Examples of behavior that contributes to creating a positive environment include:
* Using welcoming and inclusive language
* Being respectful of differing viewpoints and experiences
* Gracefully accepting constructive criticism
* Focusing on what is best for the community
* Showing empathy towards other community members
Examples of unacceptable behavior by participants include:
* The use of sexualized language or imagery and unwelcome sexual attention or advances
* Trolling, insulting/derogatory comments, and personal or political attacks
* Public or private harassment
* Publishing others' private information, such as a physical or electronic address, without explicit permission
* Other conduct which could reasonably be considered inappropriate in a professional setting
## Our Responsibilities
Project maintainers are responsible for clarifying the standards of acceptable behavior and are expected to take appropriate and fair corrective action in response to any instances of unacceptable behavior.
Project maintainers have the right and responsibility to remove, edit, or reject comments, commits, code, wiki edits, issues, and other contributions that are not aligned to this Code of Conduct, or to ban temporarily or permanently any contributor for other behaviors that they deem inappropriate, threatening, offensive, or harmful.
## Scope
This Code of Conduct applies both within project spaces and in public spaces when an individual is representing the project or its community. Examples of representing a project or community include using an official project e-mail address, posting via an official social media account, or acting as an appointed representative at an online or offline event. Representation of a project may be further defined and clarified by project maintainers.
## Enforcement
Instances of abusive, harassing, or otherwise unacceptable behavior may be reported by contacting the project team at paddle-dev@baidu.com. The project team will review and investigate all complaints, and will respond in a way that it deems appropriate to the circumstances. The project team is obligated to maintain confidentiality with regard to the reporter of an incident. Further details of specific enforcement policies may be posted separately.
Project maintainers who do not follow or enforce the Code of Conduct in good faith may face temporary or permanent repercussions as determined by other members of the project's leadership.
## Attribution
This Code of Conduct is adapted from the [Contributor Covenant][homepage], version 1.4, available at [http://contributor-covenant.org/version/1/4][version]
[homepage]: http://contributor-covenant.org
[version]: http://contributor-covenant.org/version/1/4/
# 参与者公约
## 我们的保证
为了促进一个开放透明且友好的环境,我们作为贡献者和维护者保证:无论年龄、种族、民族、性别认同和表达(方式)、体型、身体健全与否、经验水平、国籍、个人表现、宗教或性别取向,参与者在我们项目和社区中都免于骚扰。
## 我们的标准
有助于创造正面环境的行为包括但不限于:
* 使用友好和包容性语言
* 尊重不同的观点和经历
* 耐心地接受建设性批评
* 关注对社区最有利的事情
* 友善对待其他社区成员
身为参与者不能接受的行为包括但不限于:
* 使用与性有关的言语或是图像,以及不受欢迎的性骚扰
* 捣乱/煽动/造谣的行为或进行侮辱/贬损的评论,人身攻击及政治攻击
* 公开或私下的骚扰
* 未经许可地发布他人的个人资料,例如住址或是电子地址
* 其他可以被合理地认定为不恰当或者违反职业操守的行为
## 我们的责任
项目维护者有责任为「可接受的行为」标准做出诠释,以及对已发生的不被接受的行为采取恰当且公平的纠正措施。
项目维护者有权利及责任去删除、编辑、拒绝与本行为标准有所违背的评论(comments)、提交(commits)、代码、wiki 编辑、问题(issues)和其他贡献,以及项目维护者可暂时或永久性的禁止任何他们认为有不适当、威胁、冒犯、有害行为的贡献者。
## 使用范围
当一个人代表该项目或是其社区时,本行为标准适用于其项目平台和公共平台。
代表项目或是社区的情况,举例来说包括使用官方项目的电子邮件地址、通过官方的社区媒体账号发布或线上或线下事件中担任指定代表。
该项目的呈现方式可由其项目维护者进行进一步的定义及解释。
## 强制执行
可以通过paddle-dev@baidu.com,来联系项目团队来举报滥用、骚扰或其他不被接受的行为。
任何维护团队认为有必要且适合的所有投诉都将进行审查及调查,并做出相对应的回应。项目小组有对事件回报者有保密的义务。具体执行的方针近一步细节可能会单独公布。
没有切实地遵守或是执行本行为标准的项目维护人员,可能会因项目领导人或是其他成员的决定,暂时或是永久地取消其参与资格。
## 来源
本行为标准改编自[贡献者公约][主页],版本 1.4
可在此观看https://www.contributor-covenant.org/zh-cn/version/1/4/code-of-conduct.html
[主页]: https://www.contributor-covenant.org
# Contribute Code
You are welcome to contribute to project PaddlePaddle. To contribute to PaddlePaddle, you have to agree with the
[PaddlePaddle Contributor License Agreement](https://gist.github.com/wangkuiyi/0c22c7b1bd3bb7eb27d76f85c3a3e329).
We sincerely appreciate your contribution. This document explains our workflow and work style.
## Workflow
......
# A image for building paddle binaries
# Use cuda devel base image for both cpu and gpu environment
FROM nvidia/cuda:8.0-cudnn5-devel-ubuntu16.04
# When you modify it, please be aware of cudnn-runtime version
# and libcudnn.so.x in paddle/scripts/docker/build.sh
FROM nvidia/cuda:8.0-cudnn7-devel-ubuntu16.04
MAINTAINER PaddlePaddle Authors <paddle-dev@baidu.com>
ARG UBUNTU_MIRROR
......@@ -22,12 +25,13 @@ COPY ./paddle/scripts/docker/root/ /root/
RUN apt-get update && \
apt-get install -y \
git python-pip python-dev openssh-server bison libnccl-dev \
git python-pip python-dev openssh-server bison \
libnccl2=2.1.2-1+cuda8.0 libnccl-dev=2.1.2-1+cuda8.0 \
wget unzip unrar tar xz-utils bzip2 gzip coreutils ntp \
curl sed grep graphviz libjpeg-dev zlib1g-dev \
python-matplotlib gcc-4.8 g++-4.8 \
automake locales clang-format swig doxygen cmake \
liblapack-dev liblapacke-dev libboost-dev \
liblapack-dev liblapacke-dev \
clang-3.8 llvm-3.8 libclang-3.8-dev \
net-tools libtool && \
apt-get clean -y
......@@ -44,6 +48,13 @@ ENV PATH=${PATH}:${GOROOT}/bin:${GOPATH}/bin
# install glide
RUN curl -s -q https://glide.sh/get | sh
# Install TensorRT
# The unnecessary files has been removed to make the library small. It only contains include and lib now.
RUN wget -qO- http://paddlepaddledeps.bj.bcebos.com/TensorRT-4.0.0.3.Ubuntu-16.04.4.x86_64-gnu.cuda-8.0.cudnn7.0.tar.gz | \
tar -xz -C /usr/local && \
cp -rf /usr/local/TensorRT/include /usr && \
cp -rf /usr/local/TensorRT/lib /usr
# git credential to skip password typing
RUN git config --global credential.helper store
......@@ -52,10 +63,14 @@ RUN localedef -i en_US -f UTF-8 en_US.UTF-8
# FIXME: due to temporary ipykernel dependency issue, specify ipykernel jupyter
# version util jupyter fixes this issue.
RUN pip install --upgrade pip && \
# specify sphinx version as 1.5.6 and remove -U option for [pip install -U
# sphinx-rtd-theme] since -U option will cause sphinx being updated to newest
# version(1.7.1 for now), which causes building documentation failed.
RUN pip install --upgrade pip==9.0.3 && \
pip install -U wheel && \
pip install -U docopt PyYAML sphinx && \
pip install -U sphinx-rtd-theme==0.1.9 recommonmark
pip install -U docopt PyYAML sphinx==1.5.6 && \
pip install sphinx-rtd-theme==0.1.9 recommonmark
RUN pip install pre-commit 'ipython==5.3.0' && \
pip install 'ipykernel==4.6.0' 'jupyter==1.0.0' && \
......
......@@ -21,23 +21,13 @@ RUN apt-get update && \
wget curl tar unzip gcc g++ locales clang-format-3.8 swig cmake && \
apt-get clean -y
# Install Go and glide
RUN wget -qO- go.tgz https://storage.googleapis.com/golang/go1.8.1.linux-amd64.tar.gz | \
tar -xz -C /usr/local && \
mkdir /root/gopath && \
mkdir /root/gopath/bin && \
mkdir /root/gopath/src
ENV GOROOT=/usr/local/go GOPATH=/root/gopath
# should not be in the same line with GOROOT definition, otherwise docker build could not find GOROOT.
ENV PATH=${PATH}:${GOROOT}/bin:${GOPATH}/bin
# git credential to skip password typing
RUN git config --global credential.helper store
# Fix locales to en_US.UTF-8
RUN localedef -i en_US -f UTF-8 en_US.UTF-8
RUN pip install --upgrade pip && \
RUN pip install --upgrade pip==9.0.3 && \
pip install -U 'protobuf==3.1.0' && \
pip install -U wheel sphinx && \
pip install pre-commit
......
......@@ -188,7 +188,7 @@ Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved
same "printed page" as the copyright notice for easier
identification within third-party archives.
Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved.
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
......
......@@ -37,6 +37,7 @@ Please refer to our [release announcement](https://github.com/PaddlePaddle/Paddl
- Optimized math operations through SSE/AVX intrinsics, BLAS libraries
(e.g. MKL, OpenBLAS, cuBLAS) or customized CPU/GPU kernels.
- Optimized CNN networks through MKL-DNN library.
- Highly optimized recurrent networks which can handle **variable-length**
sequence without padding.
- Optimized local and distributed training for models with high dimensional
......
......@@ -7,11 +7,11 @@ Machine:
System: CentOS release 6.3 (Final), Docker 1.12.1.
PaddlePaddle: (TODO: will rerun after 0.11.0)
- paddlepaddle/paddle:latest (for MKLML and MKL-DNN)
PaddlePaddle:
- paddlepaddle/paddle:0.11.0 (for MKLML and MKL-DNN)
- MKL-DNN tag v0.11
- MKLML 2018.0.1.20171007
- paddlepaddle/paddle:latest-openblas (for OpenBLAS)
- paddlepaddle/paddle:0.11.0-openblas (for OpenBLAS)
- OpenBLAS v0.2.20
On each machine, we will test and compare the performance of training on single node using MKL-DNN / MKLML / OpenBLAS respectively.
......@@ -56,15 +56,15 @@ Input image size - 3 * 224 * 224, Time: images/second
<img src="figs/googlenet-cpu-train.png" width="500">
- Alexnet
- AlexNet
| BatchSize | 64 | 128 | 256 |
|--------------|--------| ------ | -------|
| OpenBLAS | 2.13 | 2.45 | 2.68 |
| OpenBLAS | 45.62 | 72.79 | 107.22 |
| MKLML | 66.37 | 105.60 | 144.04 |
| MKL-DNN | 399.00 | 498.94 | 626.53 |
chart TBD
<img src="figs/alexnet-cpu-train.png" width="500">
#### Inference
Test on batch size 1, 2, 4, 8, 16 on Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
......@@ -72,36 +72,41 @@ Test on batch size 1, 2, 4, 8, 16 on Intel(R) Xeon(R) Gold 6148 CPU @ 2.40GHz
| BatchSize | 1 | 2 | 4 | 8 | 16 |
|-----------|-------|-------|-------|-------|-------|
| OpenBLAS | 1.07 | 1.08 | 1.06 | 0.88 | 0.65 |
| OpenBLAS | 1.10 | 1.96 | 3.62 | 3.63 | 2.25 |
| MKLML | 5.58 | 9.80 | 15.15 | 21.21 | 28.67 |
| MKL-DNN | 75.07 | 88.64 | 82.58 | 92.29 | 96.75 |
<img src="figs/vgg-cpu-infer.png" width="500">
- ResNet-50
| BatchSize | 1 | 2 | 4 | 8 | 16 |
|-----------|-------|--------|--------|--------|--------|
| OpenBLAS | 3.35 | 3.19 | 3.09 | 2.55 | 1.96 |
| OpenBLAS | 3.31 | 6.72 | 11.59 | 13.17 | 9.27 |
| MKLML | 6.33 | 12.02 | 22.88 | 40.53 | 63.09 |
| MKL-DNN | 107.83| 148.84 | 177.78 | 189.35 | 217.69 |
<img src="figs/resnet-cpu-infer.png" width="500">
- GoogLeNet
| BatchSize | 1 | 2 | 4 | 8 | 16 |
|-----------|--------|--------|--------|--------|--------|
| OpenBLAS | 12.04 | 11.31 | 10.00 | 9.07 | 4.34 |
| OpenBLAS | 12.06 | 23.56 | 34.48 | 36.45 | 23.12 |
| MKLML | 22.74 | 41.56 | 81.22 | 133.47 | 210.53 |
| MKL-DNN | 175.10 | 272.92 | 450.70 | 512.00 | 600.94 |
- Alexnet
<img src="figs/googlenet-cpu-infer.png" width="500">
- AlexNet
| BatchSize | 1 | 2 | 4 | 8 | 16 |
|-----------|--------|--------|--------|--------|--------|
| OpenBLAS | | | | | |
| OpenBLAS | 3.53 | 6.23 | 15.04 | 26.06 | 31.62 |
| MKLML | 21.32 | 36.55 | 73.06 | 131.15 | 192.77 |
| MKL-DNN | 442.91 | 656.41 | 719.10 | 847.68 | 850.51 |
chart TBD
<img src="figs/alexnet-cpu-infer.png" width="500">
### Laptop
TBD
# Cluster Training Benchmark
## Setup
- Platform
- Kubernetes: v1.6.2
- Linux Kernel: v3.10.0
- Resource
- CPU: 10 Cores per Pod
- Memory: 5GB per Pod
- Docker Image
We use different base Docker Image to run the benchmark on Kubernetes:
- PaddlePaddle v2: paddlepaddle/paddle:0.11.0
- PaddlePaddle Fluid: paddlepaddle/paddle:[commit-id]
- TensorFlow: tensorflow/tensorflow:1.5.0-rc0
- Model
vgg16 is used in this benchmark.
## Cases
- Variable
- Batch Size of training data.
- PServer count of the training job.
- The number of trainers.
- Invariant
- The resource of trainer/pserver Pod.
### Measure the Performance for Different Batch Size
- PServer Count: 40
- Trainer Count: 100
- Metrics: mini-batch / sec
<table>
<thead>
<tr>
<th>Batch Size </th>
<th> 32</th>
<th>64</th>
<th>128 </th>
<th>256</th>
</tr>
</thead>
<tbody>
<tr>
<td> PaddlePaddle Fluid</td>
<td>-</td>
<td>- </td>
<td>- </td>
<td>- </td>
</tr>
<tr>
<td>PaddlePaddle v2 </td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>- </td>
</tr>
<tr>
<td>TensorFlow </td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>- </td>
</tr>
</tbody>
</table>
### Measure the Performance for Different PServer Count
- Trainer Count: 100
- Batch Size: 64
- Metrics: mini-batch / sec
<table>
<thead>
<tr>
<th>PServer Count </th>
<th>10</th>
<th>20</th>
<th>40 </th>
<th>60</th>
</tr>
</thead>
<tbody>
<tr>
<td> PaddlePaddle Fluid</td>
<td>-</td>
<td>- </td>
<td>- </td>
<td>- </td>
</tr>
<tr>
<td>PaddlePaddle v2 </td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>- </td>
</tr>
<tr>
<td>TensorFlow </td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>- </td>
</tr>
</tbody>
</table>
### Measure Parallel Efficiency By Increasing Trainer Count
- PServer Count: 20
- Batch Size: 64
- Metrics:
$S = \div(T1, TN)$
which S is the ratio of T1 over TN, training time of 1 and N trainers.
The parallel efficiency is:
$E = \div(S, N)$
<table>
<thead>
<tr>
<th>Trainer Counter </th>
<th>1</th>
<th>10</th>
<th>20 </th>
<th>30</th>
<th>40</th>
<th>50</th>
<th>60 </th>
<th>70</th>
<th>80</th>
<th>90</th>
<th>100 </th>
</tr>
</thead>
<tbody>
<tr>
<td> PaddlePaddle Fluid</td>
<td>-</td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>-</td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>-</td>
<td>- </td>
<td>- </td>
</tr>
<tr>
<td>PaddlePaddle v2 </td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>-</td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>-</td>
<td>- </td>
<td>- </td>
</tr>
<tr>
<td>TensorFlow </td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>-</td>
<td>- </td>
<td>- </td>
<td>- </td>
<td>-</td>
<td>- </td>
<td>- </td>
</tr>
</tbody>
</table>
## Reproduce the benchmark
TODO
FROM nvidia/cuda:8.0-cudnn5-runtime-ubuntu16.04
# you can get mirror list here:
# https://launchpad.net/ubuntu/+archivemirrors
ARG UBUNTU_MIRROR
RUN /bin/bash -c 'if [[ -n ${UBUNTU_MIRROR} ]]; then sed -i 's#http://archive.ubuntu.com/ubuntu#${UBUNTU_MIRROR}#g' /etc/apt/sources.list; fi'
RUN apt-get update && apt-get install -y python python-dev python-pip iputils-ping libgtk2.0-dev
RUN pip install -U kubernetes opencv-python
RUN pip install paddlepaddle
# if network is slowly, you may need to add proxy here.
# ENV https_proxy=
RUN sh -c 'echo "import paddle.v2 as paddle\npaddle.dataset.cifar.train10()" | python'
RUN pip uninstall -y paddlepaddle
# unset proxy if it is setted.
# ENV https_proxy=""
# NOTE: By default CI built wheel packages turn WITH_DISTRIBUTE=OFF,
# so we must build one with distribute support to install in this image.
ADD *.whl /
RUN pip install /*.whl && rm -f /*.whl
ENV LD_LIBRARY_PATH=/usr/local/lib
# tf k8s
RUN pip install tensorflow==1.4.0
ADD tf_k8s /usr/bin
RUN chmod +x /usr/bin/tf_k8s
ADD vgg16_tf.py /workspace/
# below lines may change a lot for debugging
ADD https://raw.githubusercontent.com/PaddlePaddle/cloud/develop/docker/paddle_k8s /usr/bin
ADD https://raw.githubusercontent.com/PaddlePaddle/cloud/develop/docker/k8s_tools.py /root
RUN chmod +x /usr/bin/paddle_k8s
ADD vgg16_fluid.py vgg16_v2.py /workspace/
# Performance for Distributed vgg16
## Test Result
### Hardware Infomation
- CPU: Intel(R) Xeon(R) CPU E5-2620 v4 @ 2.10GHz
- cpu MHz : 2101.000
- cache size : 20480 KB
### Blas settings
Setting environment variable: `MKL_NUM_THREADS=1`.
### Single Node Single Thread
- Metrics: samples / sec
<table>
<thead>
<tr>
<th>Batch Size </th>
<th> 32</th>
<th>64</th>
<th>128 </th>
<th>256</th>
</tr>
</thead>
<tbody>
<tr>
<td> PaddlePaddle Fluid</td>
<td> 15.44 </td>
<td> 16.32 </td>
<td> 16.74 </td>
<td> 16.79 </td>
</tr>
<tr>
<td>PaddlePaddle v2 </td>
<td> 15.97 </td>
<td> 17.04 </td>
<td> 17.60 </td>
<td> 17.83 </td>
</tr>
<tr>
<td>TensorFlow </td>
<td> 9.09 </td>
<td> 9.10 </td>
<td> 9.24 </td>
<td> 8.66 </td>
</tr>
</tbody>
</table>
### Different Batch Size
- PServer Count: 10
- Trainer Count: 20
- Metrics: samples / sec
<table>
<thead>
<tr>
<th>Batch Size </th>
<th> 32</th>
<th>64</th>
<th>128 </th>
<th>256</th>
</tr>
</thead>
<tbody>
<tr>
<td> PaddlePaddle Fluid</td>
<td> 190.20 </td>
<td> 222.15 </td>
<td> 247.40 </td>
<td> 258.18 </td>
</tr>
<tr>
<td>PaddlePaddle v2 </td>
<td> 170.96 </td>
<td> 233.71 </td>
<td> 256.14 </td>
<td> 329.23 </td>
</tr>
<tr>
<td>TensorFlow </td>
<td> - </td>
<td> - </td>
<td> - </td>
<td> - </td>
</tr>
</tbody>
</table>
### Accelerate Rate
- Pserver Count: 20
- Batch Size: 128
- Metrics: samples / sec
<table>
<thead>
<tr>
<th>Trainer Count </th>
<th>20</th>
<th>40</th>
<th>80</th>
<th>100</th>
</tr>
</thead>
<tbody>
<tr>
<td> PaddlePaddle Fluid</td>
<td> 263.29 (78.64%) </td>
<td> 518.80 (77.47%) </td>
<td> 836.26 (62.44%) </td>
<td> 1019.29 (60.89%) </td>
</tr>
<tr>
<td>PaddlePaddle v2 (need more tests) </td>
<td> 326.85 (92.85%) </td>
<td> 534.58 (75.93%) </td>
<td> 853.30 (60.60%) </td>
<td> 1041.99 (59.20%) </td>
</tr>
<tr>
<td>TensorFlow </td>
<td> - </td>
<td> - </td>
<td> - </td>
<td> - </td>
</tr>
</tbody>
</table>
### Different Pserver Count
- Trainer Count: 60
- Batch Size: 128
- Metrics: samples/ sec
<table>
<thead>
<tr>
<th>PServer Count </th>
<th>3</th>
<th>6</th>
<th>10</th>
<th>20</th>
</tr>
</thead>
<tbody>
<tr>
<td> PaddlePaddle Fluid(should fix in next PR) </td>
<td> 589.1 </td>
<td> 592.6 </td>
<td> 656.4 </td>
<td> 655.8 </td>
</tr>
<tr>
<td>PaddlePaddle v2 (need more tests) </td>
<td> 593.4 </td>
<td> 791.3 </td>
<td> 729.7 </td>
<td> 821.7 </td>
</tr>
<tr>
<td>TensorFlow </td>
<td> - </td>
<td> - </td>
<td> - </td>
<td> - </td>
</tr>
</tbody>
</table>
*The performance gap between Fuild and v2 comes from the network interference.*
## Steps to Run the Performance Test
1. You must re-compile PaddlePaddle and enable `-DWITH_DISTRIBUTE` to build PaddlePaddle with distributed support.
1. When the build finishes, copy the output `whl` package located under `build/python/dist` to current directory.
1. Run `docker build -t [image:tag] .` to build the docker image and run `docker push [image:tag]` to push the image to reponsitory so kubernetes can find it.
1. Run `kubectl create -f pserver.yaml && kubectl create -f trainer.yaml` to start the job on your kubernetes cluster (you must configure the `kubectl` client before this step).
1. Run `kubectl get po` to get running pods, and run `kubectl logs [podID]` to fetch the pod log of pservers and trainers.
Check the logs for the distributed training progress and analyze the performance.
## Enable Verbos Logs
Edit `pserver.yaml` and `trainer.yaml` and add an environment variable `GLOG_v=3` and `GLOG_logtostderr=1` to see what happend in detail.
apiVersion: extensions/v1beta1
kind: ReplicaSet
metadata:
name: vgg16job-pserver
spec:
replicas: 10
template:
metadata:
labels:
paddle-job-pserver: vgg16job
spec:
hostNetwork: true
imagePullSecrets:
- name: job-registry-secret
containers:
- name: pserver
image: "registry.baidu.com/paddlepaddle/fluid_benchmark:vgg16"
imagePullPolicy: Always
ports:
- name: jobport-30236
containerPort: 30236
env:
- name: PADDLE_JOB_NAME
value: vgg16job
- name: MKL_NUM_THREADS
value: "1"
- name: TRAINING_ROLE
value: "PSERVER"
- name: TRAINERS
value: "20"
- name: PSERVERS
value: "10"
- name: TOPOLOGY
value: ""
- name: ENTRY
value: "MKL_NUM_THREADS=1 python /workspace/vgg16_fluid.py --local 0"
- name: TRAINER_PACKAGE
value: "/workspace"
- name: PADDLE_INIT_PORT
value: "30236"
- name: PADDLE_INIT_NICS
value: "xgbe0"
- name: PADDLE_INIT_TRAINER_COUNT
value: "1"
- name: PADDLE_INIT_PORTS_NUM
value: "1"
- name: PADDLE_INIT_PORTS_NUM_FOR_SPARSE
value: "1"
- name: PADDLE_INIT_NUM_GRADIENT_SERVERS
value: "20"
- name: PADDLE_INIT_NUM_PASSES
value: "1"
- name: PADDLE_INIT_USE_GPU
value: "0"
- name: LD_LIBRARY_PATH
value: "/usr/local/lib:/usr/local/nvidia/lib64"
- name: NAMESPACE
valueFrom:
fieldRef:
fieldPath: "metadata.namespace"
- name: POD_IP
valueFrom:
fieldRef:
fieldPath: "status.podIP"
command: ["paddle_k8s", "start_fluid"]
resources:
requests:
memory: 10Gi
cpu: 4
limits:
memory: 10Gi
cpu: 4
apiVersion: batch/v1
kind: Job
metadata:
name: vgg16job-trainer
spec:
parallelism: 20
completions: 20
template:
metadata:
labels:
paddle-job: vgg16job
spec:
imagePullSecrets:
- name: job-registry-secret
hostNetwork: true
containers:
- name: trainer
image: "registry.baidu.com/paddlepaddle/fluid_benchmark:vgg16"
imagePullPolicy: Always
command: ["paddle_k8s", "start_fluid"]
env:
- name: PADDLE_JOB_NAME
value: vgg16job
- name: TRAINING_ROLE
value: "TRAINER"
- name: TRAINERS
value: "20"
- name: PSERVERS
value: "10"
- name: TOPOLOGY
value: ""
- name: ENTRY
value: "MKL_NUM_THREADS=1 python /workspace/vgg16_fluid.py --local 0 --batch_size 128"
- name: TRAINER_PACKAGE
value: "/workspace"
- name: PADDLE_INIT_PORT
value: "30236"
- name: PADDLE_INIT_NICS
value: "xgbe0"
- name: PADDLE_INIT_TRAINER_COUNT
value: "1"
- name: PADDLE_INIT_PORTS_NUM
value: "1"
- name: PADDLE_INIT_PORTS_NUM_FOR_SPARSE
value: "1"
- name: PADDLE_INIT_NUM_GRADIENT_SERVERS
value: "20"
- name: PADDLE_INIT_NUM_PASSES
value: "1"
- name: PADDLE_INIT_USE_GPU
value: "0"
- name: LD_LIBRARY_PATH
value: "/usr/local/lib:/usr/local/nvidia/lib64"
- name: NAMESPACE
valueFrom:
fieldRef:
fieldPath: "metadata.namespace"
- name: POD_IP
valueFrom:
fieldRef:
fieldPath: "status.podIP"
resources:
requests:
memory: 40Gi
cpu: 2
limits:
memory: 40Gi
cpu: 2
restartPolicy: Never
#!/bin/bash
check_trainer_ret() {
ret=$1
stdbuf -oL echo "job returned $ret...setting pod return message..."
stdbuf -oL echo "==============================="
if [ $ret -eq 136 ] ; then
echo "Error Arithmetic Operation(Floating Point Exception)" > /dev/termination-log
elif [ $ret -eq 139 ] ; then
echo "Segmentation Fault" > /dev/termination-log
elif [ $ret -eq 1 ] ; then
echo "General Error" > /dev/termination-log
elif [ $ret -eq 134 ] ; then
echo "Program Abort" > /dev/termination-log
fi
stdbuf -oL echo "termination log wroted..."
exit $ret
}
g_pservers=""
g_trainers=""
wait_running_pods(){
pserver_label="tf-job-pserver=${JOB_NAME}"
trainer_label="tf-job-trainer=${JOB_NAME}"
stdbuf -oL python /root/k8s_tools.py wait_pods_running ${pserver_label} ${PSERVERS_NUM}
stdbuf -oL python /root/k8s_tools.py wait_pods_running ${trainer_label} ${TRAINERS_NUM}
g_pservers=$(python /root/k8s_tools.py fetch_endpoints ${pserver_label} ${PORT})
g_trainers=$(python /root/k8s_tools.py fetch_endpoints ${trainer_label} ${PORT})
}
start_tf_pserver(){
wait_running_pods
label="tf-job-pserver=${JOB_NAME}"
pserver_id=$(python /root/k8s_tools.py fetch_id ${label})
cmd="${ENTRY} --ps_hosts=${g_pservers} --worker_hosts=${g_trainers} \
--job_name=${TF_JOB_NAME} --task_index=${pserver_id}"
stdbuf -oL sh -c "cd ${TRAINER_PACKAGE} && ${cmd}"
}
start_tf_trainer(){
wait_running_pods
label="tf-job-trainer=${JOB_NAME}"
trainer_id=$(python /root/k8s_tools.py fetch_id ${label})
cmd="${ENTRY} --ps_hosts=${g_pservers} --worker_hosts=${g_trainers} \
--job_name=${TF_JOB_NAME} --task_index=${trainer_id} --batch_size=${BATCH_SIZE}"
stdbuf -oL sh -c "cd ${TRAINER_PACKAGE} && ${cmd}"
check_trainer_ret $?
}
start_tf(){
if [[ "${TF_JOB_NAME}" == "worker" ]]; then
start_tf_trainer
else
start_tf_pserver
fi
}
usage() {
echo "usage: tf_k8s [<args>]:"
echo " start_tf Start tensorflow jobs"
}
case "$1" in
start_tf)
start_tf
;;
--help)
usage
;;
*)
usage
;;
esac
apiVersion: extensions/v1beta1
kind: ReplicaSet
metadata:
name: vgg16job-tf-pserver
spec:
replicas: 10
template:
metadata:
labels:
tf-job-pserver: vgg16job-tf
spec:
hostNetwork: true
imagePullSecrets:
- name: job-registry-secret
containers:
- name: pserver
image: "registry.baidu.com/paddlepaddle/fluid_benchmark_tf:vgg16"
imagePullPolicy: Always
command: ["tf_k8s", "start_tf"]
ports:
- name: jobport-30236
containerPort: 30236
env:
- name: PORT
value: "32036"
- name: ENTRY
value: "python vgg16_tf.py"
- name: JOB_NAME
value: vgg16job-tf
- name: PSERVERS_NUM
value: "10"
- name: TF_JOB_NAME
value: "ps"
- name: TRAINERS_NUM
value: "20"
- name: BATCH_SIZE
value: "128"
- name: TRAINER_PACKAGE
value: "/workspace"
- name: NUM_PASSES
value: "1"
- name: NAMESPACE
valueFrom:
fieldRef:
fieldPath: "metadata.namespace"
- name: POD_IP
valueFrom:
fieldRef:
fieldPath: "status.podIP"
resources:
requests:
memory: 10Gi
cpu: 4
limits:
memory: 10Gi
cpu: 4
apiVersion: batch/v1
kind: Job
metadata:
name: vgg16job-tf-trainer
spec:
parallelism: 20
completions: 20
template:
metadata:
labels:
tf-job-trainer: vgg16job-tf
spec:
imagePullSecrets:
- name: job-registry-secret
hostNetwork: true
containers:
- name: trainer
image: "registry.baidu.com/paddlepaddle/fluid_benchmark_tf:vgg16"
imagePullPolicy: Always
command: ["tf_k8s", "start_tf"]
ports:
- name: jobport-30236
containerPort: 30236
env:
- name: PORT
value: "32036"
- name: JOB_NAME
value: vgg16job-tf
- name: TF_JOB_NAME
value: "worker"
- name: ENTRY
value: "python vgg16_tf.py"
- name: PSERVERS_NUM
value: "10"
- name: BATCH_SIZE
value: "128"
- name: TRAINERS_NUM
value: "20"
- name: TRAINER_PACKAGE
value: "/workspace"
- name: NUM_PASSES
value: "1"
- name: NAMESPACE
valueFrom:
fieldRef:
fieldPath: "metadata.namespace"
- name: POD_IP
valueFrom:
fieldRef:
fieldPath: "status.podIP"
resources:
requests:
memory: 40Gi
cpu: 2
limits:
memory: 40Gi
cpu: 2
restartPolicy: Never
apiVersion: extensions/v1beta1
kind: ReplicaSet
metadata:
name: vgg16v2job-pserver
spec:
replicas: 10
template:
metadata:
labels:
paddle-job-pserver: vgg16v2job
spec:
hostNetwork: true
imagePullSecrets:
- name: job-registry-secret
containers:
- name: pserver
image: "registry.baidu.com/paddlepaddle/fluid_benchmark:vgg16"
imagePullPolicy: Always
ports:
- name: jobport-30236
containerPort: 30236
env:
- name: PADDLE_JOB_NAME
value: vgg16v2job
- name: TRAINERS
value: "20"
- name: PSERVERS
value: "10"
- name: TOPOLOGY
value: ""
- name: ENTRY
value: "python train.py"
- name: TRAINER_PACKAGE
value: "/workspace"
- name: PADDLE_INIT_PORT
value: "30236"
- name: PADDLE_INIT_NICS
value: "xgbe0"
- name: PADDLE_INIT_TRAINER_COUNT
value: "1"
- name: PADDLE_INIT_PORTS_NUM
value: "1"
- name: PADDLE_INIT_PORTS_NUM_FOR_SPARSE
value: "1"
- name: PADDLE_INIT_NUM_GRADIENT_SERVERS
value: "20"
- name: PADDLE_INIT_NUM_PASSES
value: "1"
- name: PADDLE_INIT_USE_GPU
value: "0"
- name: LD_LIBRARY_PATH
value: "/usr/local/lib:/usr/local/nvidia/lib64"
- name: NAMESPACE
valueFrom:
fieldRef:
fieldPath: "metadata.namespace"
command: ["paddle_k8s", "start_pserver"]
resources:
requests:
memory: 10Gi
cpu: 4
limits:
memory: 10Gi
cpu: 4
apiVersion: batch/v1
kind: Job
metadata:
name: vgg16v2job-trainer
spec:
parallelism: 20
completions: 20
template:
metadata:
labels:
paddle-job: vgg16v2job
spec:
imagePullSecrets:
- name: job-registry-secret
hostNetwork: true
containers:
- name: trainer
image: "registry.baidu.com/paddlepaddle/fluid_benchmark:vgg16"
imagePullPolicy: Always
command: ["paddle_k8s", "start_trainer", "v2"]
env:
- name: PADDLE_JOB_NAME
value: vgg16v2job
- name: BATCH_SIZE
value: "256"
- name: TRAINERS
value: "20"
- name: PSERVERS
value: "10"
- name: TOPOLOGY
value: ""
- name: ENTRY
value: "cd /workspace && MKL_NUM_THREADS=1 python /workspace/vgg16_v2.py"
- name: TRAINER_PACKAGE
value: "/workspace"
- name: PADDLE_INIT_PORT
value: "30236"
- name: PADDLE_INIT_NICS
value: "xgbe0"
- name: PADDLE_INIT_TRAINER_COUNT
value: "1"
- name: PADDLE_INIT_PORTS_NUM
value: "1"
- name: PADDLE_INIT_PORTS_NUM_FOR_SPARSE
value: "1"
- name: PADDLE_INIT_NUM_GRADIENT_SERVERS
value: "20"
- name: PADDLE_INIT_NUM_PASSES
value: "2"
- name: PADDLE_INIT_USE_GPU
value: "0"
- name: LD_LIBRARY_PATH
value: "/usr/local/lib:/usr/local/nvidia/lib64"
- name: NAMESPACE
valueFrom:
fieldRef:
fieldPath: "metadata.namespace"
resources:
requests:
memory: 40Gi
cpu: 2
limits:
memory: 40Gi
cpu: 2
restartPolicy: Never
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""VGG16 benchmark in Fluid"""
from __future__ import print_function
import sys
import time
import numpy as np
import paddle.v2 as paddle
import paddle.fluid as fluid
import paddle.fluid.core as core
import paddle.fluid.profiler as profiler
import argparse
import functools
import os
from paddle.fluid import debuger
def str2bool(v):
if v.lower() in ('yes', 'true', 't', 'y', '1'):
return True
elif v.lower() in ('no', 'false', 'f', 'n', '0'):
return False
else:
raise argparse.ArgumentTypeError('Boolean value expected.')
parser = argparse.ArgumentParser(description=__doc__)
parser.add_argument(
'--batch_size', type=int, default=128, help="Batch size for training.")
parser.add_argument(
'--learning_rate',
type=float,
default=1e-3,
help="Learning rate for training.")
parser.add_argument('--num_passes', type=int, default=50, help="No. of passes.")
parser.add_argument(
'--device',
type=str,
default='CPU',
choices=['CPU', 'GPU'],
help="The device type.")
parser.add_argument('--device_id', type=int, default=0, help="The device id.")
parser.add_argument(
'--data_format',
type=str,
default='NCHW',
choices=['NCHW', 'NHWC'],
help='The data order, now only support NCHW.')
parser.add_argument(
'--data_set',
type=str,
default='cifar10',
choices=['cifar10', 'flowers'],
help='Optional dataset for benchmark.')
parser.add_argument(
'--local',
type=str2bool,
default=True,
help='Whether to run as local mode.')
parser.add_argument(
"--ps_hosts",
type=str,
default="",
help="Comma-separated list of hostname:port pairs")
parser.add_argument(
"--trainer_hosts",
type=str,
default="",
help="Comma-separated list of hostname:port pairs")
# Flags for defining the tf.train.Server
parser.add_argument(
"--task_index", type=int, default=0, help="Index of task within the job")
args = parser.parse_args()
def vgg16_bn_drop(input):
def conv_block(input, num_filter, groups, dropouts):
return fluid.nets.img_conv_group(
input=input,
pool_size=2,
pool_stride=2,
conv_num_filter=[num_filter] * groups,
conv_filter_size=3,
conv_act='relu',
conv_with_batchnorm=True,
conv_batchnorm_drop_rate=dropouts,
pool_type='max')
conv1 = conv_block(input, 64, 2, [0.3, 0])
conv2 = conv_block(conv1, 128, 2, [0.4, 0])
conv3 = conv_block(conv2, 256, 3, [0.4, 0.4, 0])
conv4 = conv_block(conv3, 512, 3, [0.4, 0.4, 0])
conv5 = conv_block(conv4, 512, 3, [0.4, 0.4, 0])
drop = fluid.layers.dropout(x=conv5, dropout_prob=0.5)
fc1 = fluid.layers.fc(input=drop, size=4096, act=None)
bn = fluid.layers.batch_norm(input=fc1, act='relu')
drop2 = fluid.layers.dropout(x=bn, dropout_prob=0.5)
fc2 = fluid.layers.fc(input=drop2, size=4096, act=None)
return fc2
def main():
if args.data_set == "cifar10":
classdim = 10
if args.data_format == 'NCHW':
data_shape = [3, 32, 32]
else:
data_shape = [32, 32, 3]
else:
classdim = 102
if args.data_format == 'NCHW':
data_shape = [3, 224, 224]
else:
data_shape = [224, 224, 3]
# Input data
images = fluid.layers.data(name='pixel', shape=data_shape, dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
# Train program
net = vgg16_bn_drop(images)
predict = fluid.layers.fc(input=net, size=classdim, act='softmax')
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
# Evaluator
batch_size = fluid.layers.create_tensor(dtype='int64')
batch_acc = fluid.layers.accuracy(
input=predict, label=label, total=batch_size)
# inference program
inference_program = fluid.default_main_program().clone()
with fluid.program_guard(inference_program):
inference_program = fluid.io.get_inference_program(batch_acc)
# Optimization
optimizer = fluid.optimizer.Adam(learning_rate=args.learning_rate)
optimize_ops, params_grads = optimizer.minimize(avg_cost)
# Initialize executor
place = core.CPUPlace() if args.device == 'CPU' else core.CUDAPlace(
args.device_id)
exe = fluid.Executor(place)
# test
def test(exe):
test_pass_acc = fluid.average.WeightedAverage()
for batch_id, data in enumerate(test_reader()):
img_data = np.array(map(lambda x: x[0].reshape(data_shape),
data)).astype("float32")
y_data = np.array(map(lambda x: x[1], data)).astype("int64")
y_data = y_data.reshape([-1, 1])
outs = exe.run(inference_program,
feed={"pixel": img_data,
"label": y_data},
fetch_list=[batch_acc, batch_size])
test_pass_acc.add(value=np.array(outs[0]), weight=np.array(outs[1]))
return test_pass_acc.eval()
def train_loop(exe, trainer_prog):
iters = 0
ts = time.time()
train_pass_acc = fluid.average.WeightedAverage()
for pass_id in range(args.num_passes):
# train
start_time = time.time()
num_samples = 0
train_pass_acc.reset()
for batch_id, data in enumerate(train_reader()):
ts = time.time()
img_data = np.array(
map(lambda x: x[0].reshape(data_shape), data)).astype(
"float32")
y_data = np.array(map(lambda x: x[1], data)).astype("int64")
y_data = y_data.reshape([-1, 1])
loss, acc, b_size = exe.run(
trainer_prog,
feed={"pixel": img_data,
"label": y_data},
fetch_list=[avg_cost, batch_acc, batch_size])
iters += 1
num_samples += len(data)
train_pass_acc.add(value=acc, weight=b_size)
print(
"Pass = %d, Iters = %d, Loss = %f, Accuracy = %f, Speed = %.2f img/s"
% (pass_id, iters, loss, acc,
len(data) / (time.time() - ts))
) # The accuracy is the accumulation of batches, but not the current batch.
pass_elapsed = time.time() - start_time
pass_train_acc = train_pass_acc.eval()
pass_test_acc = test(exe)
print(
"Pass = %d, Training performance = %f imgs/s, Train accuracy = %f, Test accuracy = %f\n"
% (pass_id, num_samples / pass_elapsed, pass_train_acc,
pass_test_acc))
if args.local:
# Parameter initialization
exe.run(fluid.default_startup_program())
# data reader
train_reader = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.cifar.train10() if args.data_set == 'cifar10'
else paddle.dataset.flowers.train(),
buf_size=5120),
batch_size=args.batch_size)
test_reader = paddle.batch(
paddle.dataset.cifar.test10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.test(),
batch_size=args.batch_size)
train_loop(exe, fluid.default_main_program())
else:
trainers = int(os.getenv("TRAINERS")) # total trainer count
print("trainers total: ", trainers)
training_role = os.getenv(
"TRAINING_ROLE",
"TRAINER") # get the training role: trainer/pserver
t = fluid.DistributeTranspiler()
t.transpile(
optimize_ops,
params_grads,
trainer_id=args.task_index,
pservers=args.ps_hosts,
trainers=trainers)
if training_role == "PSERVER":
current_endpoint = os.getenv("POD_IP") + ":" + os.getenv(
"PADDLE_INIT_PORT")
if not current_endpoint:
print("need env SERVER_ENDPOINT")
exit(1)
pserver_prog = t.get_pserver_program(current_endpoint)
pserver_startup = t.get_startup_program(current_endpoint,
pserver_prog)
exe.run(pserver_startup)
exe.run(pserver_prog)
elif training_role == "TRAINER":
# Parameter initialization
exe.run(fluid.default_startup_program())
# data reader
train_reader = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.cifar.train10() if args.data_set == 'cifar10'
else paddle.dataset.flowers.train(),
buf_size=5120),
batch_size=args.batch_size)
test_reader = paddle.batch(
paddle.dataset.cifar.test10() if args.data_set == 'cifar10' else
paddle.dataset.flowers.test(),
batch_size=args.batch_size)
trainer_prog = t.get_trainer_program()
feeder = fluid.DataFeeder(feed_list=[images, label], place=place)
# TODO(typhoonzero): change trainer startup program to fetch parameters from pserver
exe.run(fluid.default_startup_program())
train_loop(exe, trainer_prog)
else:
print("environment var TRAINER_ROLE should be TRAINER os PSERVER")
def print_arguments():
print('----------- Configuration Arguments -----------')
for arg, value in sorted(vars(args).iteritems()):
print('%s: %s' % (arg, value))
print('------------------------------------------------')
if __name__ == "__main__":
print_arguments()
main()
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""VGG16 benchmark in TensorFlow
You can get distribution example template structure here:
https://medium.com/clusterone/how-to-write-distributed-tensorflow-code-with-an-example-on-tensorport-70bf3306adcb
https://www.tensorflow.org/deploy/distributed
"""
import tensorflow as tf
import paddle.v2 as paddle
import numpy as np
import argparse
import time
parser = argparse.ArgumentParser(description=__doc__)
parser.add_argument(
'--batch_size', type=int, default=128, help="Batch size for training.")
parser.add_argument(
'--learning_rate',
type=float,
default=1e-3,
help="Learning rate for training.")
parser.add_argument('--num_passes', type=int, default=50, help="No. of passes.")
parser.add_argument(
'--device',
type=str,
default='CPU',
choices=['CPU', 'GPU'],
help="The device type.")
parser.add_argument(
'--data_format',
type=str,
default='NHWC',
choices=['NCHW', 'NHWC'],
help='The data order, NCHW=[batch, channels, height, width].'
'Only support NHWC right now.')
parser.add_argument(
'--data_set',
type=str,
default='cifar10',
choices=['cifar10', 'flowers'],
help='Optional dataset for benchmark.')
parser.add_argument(
"--ps_hosts",
type=str,
default="",
help="Comma-separated list of hostname:port pairs")
parser.add_argument(
"--worker_hosts",
type=str,
default="",
help="Comma-separated list of hostname:port pairs")
parser.add_argument(
"--job_name", type=str, default="", help="One of 'worker', 'ps'")
# Flags for defining the tf.train.Server
parser.add_argument(
"--task_index", type=int, default=0, help="Index of task within the job")
args = parser.parse_args()
class VGG16Model(object):
def __init__(self):
self.parameters = []
def batch_norm_relu(self, inputs, is_training):
"""Performs a batch normalization followed by a ReLU."""
# We set fused=True for a significant speed boost. See
# https://www.tensorflow.org/speed/speed_guide#common_fused_ops
inputs = tf.layers.batch_normalization(
inputs=inputs,
axis=1 if args.data_format == 'NCHW' else -1,
momentum=0.9,
epsilon=1e-05,
center=True,
scale=True,
training=is_training,
fused=True)
inputs = tf.nn.relu(inputs)
return inputs
def conv_bn_layer(self,
name,
images,
kernel_shape,
is_training,
drop_rate=0.0):
with tf.name_scope(name) as scope:
kernel = tf.Variable(
tf.truncated_normal(
kernel_shape, dtype=tf.float32, stddev=1e-1),
name='weights')
conv = tf.nn.conv2d(
images,
kernel, [1, 1, 1, 1],
data_format=args.data_format,
padding='SAME')
biases = tf.Variable(
tf.constant(
0.0, shape=[kernel_shape[-1]], dtype=tf.float32),
trainable=True,
name='biases')
out = tf.nn.bias_add(conv, biases)
out = self.batch_norm_relu(out, is_training)
out = tf.layers.dropout(out, rate=drop_rate, training=is_training)
return out
def fc_layer(self, name, inputs, shape):
with tf.name_scope(name) as scope:
fc_w = tf.Variable(
tf.truncated_normal(
shape, dtype=tf.float32, stddev=1e-1),
name='weights')
fc_b = tf.Variable(
tf.constant(
0.0, shape=[shape[-1]], dtype=tf.float32),
trainable=True,
name='biases')
out = tf.nn.bias_add(tf.matmul(inputs, fc_w), fc_b)
return out
def network(self, images, class_dim, is_training):
""" VGG16 model structure.
TODO(kuke): enable this network to support the 'NCHW' data format
"""
# conv1
conv1_1 = self.conv_bn_layer(
'conv1_1', images, [3, 3, 3, 64], is_training, drop_rate=0.3)
conv1_2 = self.conv_bn_layer(
'conv1_2', conv1_1, [3, 3, 64, 64], is_training, drop_rate=0.0)
# pool1
pool1 = tf.nn.max_pool(
conv1_2,
ksize=[1, 2, 2, 1],
strides=[1, 2, 2, 1],
padding='SAME',
name='pool1')
# conv2
conv2_1 = self.conv_bn_layer(
'conv2_1', pool1, [3, 3, 64, 128], is_training, drop_rate=0.4)
conv2_2 = self.conv_bn_layer(
'conv2_2', conv2_1, [3, 3, 128, 128], is_training, drop_rate=0.0)
# pool2
pool2 = tf.nn.max_pool(
conv2_2,
ksize=[1, 2, 2, 1],
strides=[1, 2, 2, 1],
padding='SAME',
name='pool2')
# conv3
conv3_1 = self.conv_bn_layer(
'conv3_1', pool2, [3, 3, 128, 256], is_training, drop_rate=0.4)
conv3_2 = self.conv_bn_layer(
'conv3_2', conv3_1, [3, 3, 256, 256], is_training, drop_rate=0.4)
conv3_3 = self.conv_bn_layer(
'conv3_3', conv3_2, [3, 3, 256, 256], is_training, drop_rate=0.0)
# pool3
pool3 = tf.nn.max_pool(
conv3_3,
ksize=[1, 2, 2, 1],
strides=[1, 2, 2, 1],
padding='SAME',
name='pool3')
# conv4
conv4_1 = self.conv_bn_layer(
'conv4_1', pool3, [3, 3, 256, 512], is_training, drop_rate=0.4)
conv4_2 = self.conv_bn_layer(
'conv4_2', conv4_1, [3, 3, 512, 512], is_training, drop_rate=0.4)
conv4_3 = self.conv_bn_layer(
'conv4_3', conv4_2, [3, 3, 512, 512], is_training, drop_rate=0.0)
# pool4
pool4 = tf.nn.max_pool(
conv4_3,
ksize=[1, 2, 2, 1],
strides=[1, 2, 2, 1],
padding='SAME',
name='pool4')
# conv5
conv5_1 = self.conv_bn_layer(
'conv5_1', pool4, [3, 3, 512, 512], is_training, drop_rate=0.4)
conv5_2 = self.conv_bn_layer(
'conv5_2', conv5_1, [3, 3, 512, 512], is_training, drop_rate=0.4)
conv5_3 = self.conv_bn_layer(
'conv5_3', conv5_2, [3, 3, 512, 512], is_training, drop_rate=0.0)
# pool5
pool5 = tf.nn.max_pool(
conv5_3,
ksize=[1, 2, 2, 1],
strides=[1, 2, 2, 1],
padding='SAME',
name='pool4')
# flatten
shape = int(np.prod(pool5.get_shape()[1:]))
pool5_flat = tf.reshape(pool5, [-1, shape])
# fc1
drop = tf.layers.dropout(pool5_flat, rate=0.5, training=is_training)
fc1 = self.fc_layer('fc1', drop, [shape, 512])
# fc2
bn = self.batch_norm_relu(fc1, is_training)
drop = tf.layers.dropout(bn, rate=0.5, training=is_training)
fc2 = self.fc_layer('fc2', drop, [512, 512])
fc3 = self.fc_layer('fc3', fc2, [512, class_dim])
return fc3
def run_benchmark(cluster_spec, server):
"""Run benchmark on cifar10 or flowers."""
if args.data_set == "cifar10":
class_dim = 10
raw_shape = (3, 32, 32)
dat_shape = (None, 32, 32, 3) if args.data_format == 'NHWC' else (
None, 3, 32, 32)
else:
class_dim = 102
raw_shape = (3, 224, 224)
dat_shape = (None, 224, 224, 3) if args.data_format == 'NHWC' else (
None, 3, 224, 224)
device = tf.train.replica_device_setter(
worker_device="/job:worker/task:{}".format(args.task_index),
cluster=cluster_spec)
with tf.device(device):
images = tf.placeholder(tf.float32, shape=dat_shape)
labels = tf.placeholder(tf.int64, shape=(None, ))
is_training = tf.placeholder('bool')
onehot_labels = tf.one_hot(labels, depth=class_dim)
vgg16 = VGG16Model()
logits = vgg16.network(images, class_dim, is_training)
loss = tf.losses.softmax_cross_entropy(
onehot_labels=onehot_labels, logits=logits)
avg_loss = tf.reduce_mean(loss)
correct = tf.equal(tf.argmax(logits, 1), labels)
accuracy = tf.reduce_mean(tf.cast(correct, tf.float32))
optimizer = tf.train.AdamOptimizer(learning_rate=args.learning_rate)
update_ops = tf.get_collection(tf.GraphKeys.UPDATE_OPS)
global_step = tf.Variable(0, name='global_step', trainable=False)
with tf.control_dependencies(update_ops):
train_op = optimizer.minimize(avg_loss, global_step=global_step)
summary_op = tf.summary.merge_all()
init_op = tf.global_variables_initializer()
# data reader
train_reader = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.cifar.train10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.train(),
buf_size=5120),
batch_size=args.batch_size)
test_reader = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.cifar.test10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.test(),
buf_size=5120),
batch_size=args.batch_size)
# test
def test():
test_accs = []
for batch_id, data in enumerate(test_reader()):
test_images = np.array(
map(lambda x: np.transpose(x[0].reshape(raw_shape),
axes=[1, 2, 0]) if args.data_format == 'NHWC' else x[0], data)).astype("float32")
test_labels = np.array(map(lambda x: x[1], data)).astype('int64')
test_accs.append(
accuracy.eval(feed_dict={
images: test_images,
labels: test_labels,
is_training: False
}))
return np.mean(test_accs)
config = tf.ConfigProto(
intra_op_parallelism_threads=1,
inter_op_parallelism_threads=1,
log_device_placement=True)
config.gpu_options.allow_growth = True
hooks = [tf.train.StopAtStepHook(last_step=1000000)]
with tf.train.MonitoredTrainingSession(
master=server.target,
is_chief=(args.task_index == 0),
hooks=hooks,
config=config) as sess:
iters, num_samples, start_time = 0, 0, 0.0
for pass_id in range(args.num_passes):
# train
num_samples = 0
start_time = time.time()
for batch_id, data in enumerate(train_reader()):
train_images = np.array(
map(lambda x: np.transpose(x[0].reshape(raw_shape),
axes=[1, 2, 0]) if args.data_format == 'NHWC' else x[0], data)).astype("float32")
train_labels = np.array(map(lambda x: x[1], data)).astype(
'int64')
iter_begin_time = time.time()
_, loss, acc = sess.run([train_op, avg_loss, accuracy],
feed_dict={
images: train_images,
labels: train_labels,
is_training: True
})
iters += 1
print(
"Pass = %d, Iters = %d, Loss = %f, Accuracy = %f, Speed=%.2f imgs/sec"
% (pass_id, iters, loss, acc,
len(data) / (time.time() - iter_begin_time)))
num_samples += len(data)
train_elapsed = time.time() - start_time
# test
pass_test_acc = test()
print("Pass = %d, Train speed = %f imgs/s, Test accuracy = %f\n" %
(pass_id, num_samples / train_elapsed, pass_test_acc))
def print_arguments():
print('----------- Configuration Arguments -----------')
for arg, value in sorted(vars(args).iteritems()):
print('%s: %s' % (arg, value))
print('------------------------------------------------')
if __name__ == '__main__':
print_arguments()
ps_hosts = args.ps_hosts.split(",")
worker_hosts = args.worker_hosts.split(",")
# Create a cluster from the parameter server and worker hosts.
cluster_spec = tf.train.ClusterSpec({
"ps": ps_hosts,
"worker": worker_hosts
})
# Create and start a server for the local task.
server = tf.train.Server(
cluster_spec, job_name=args.job_name, task_index=args.task_index)
if args.job_name == "ps":
print("start pserver")
server.join()
elif args.job_name == "worker":
print("start worker")
run_benchmark(cluster_spec, server)
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
#Licensed under the Apache License, Version 2.0 (the "License");
#you may not use this file except in compliance with the License.
#You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
#Unless required by applicable law or agreed to in writing, software
#distributed under the License is distributed on an "AS IS" BASIS,
#WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
#See the License for the specific language governing permissions and
#limitations under the License.
import gzip
import paddle.v2.dataset.cifar as cifar
import paddle.v2 as paddle
import time
import os
DATA_DIM = 3 * 32 * 32
CLASS_DIM = 10
BATCH_SIZE = os.getenv("BATCH_SIZE")
if BATCH_SIZE:
BATCH_SIZE = int(BATCH_SIZE)
else:
BATCH_SIZE = 128
print "batch_size", BATCH_SIZE
NODE_COUNT = int(os.getenv("TRAINERS"))
ts = 0
def vgg(input, nums, class_dim):
def conv_block(input, num_filter, groups, num_channels=None):
return paddle.networks.img_conv_group(
input=input,
num_channels=num_channels,
pool_size=2,
pool_stride=2,
conv_num_filter=[num_filter] * groups,
conv_filter_size=3,
conv_act=paddle.activation.Relu(),
pool_type=paddle.pooling.Max())
assert len(nums) == 5
# the channel of input feature is 3
conv1 = conv_block(input, 64, nums[0], 3)
conv2 = conv_block(conv1, 128, nums[1])
conv3 = conv_block(conv2, 256, nums[2])
conv4 = conv_block(conv3, 512, nums[3])
conv5 = conv_block(conv4, 512, nums[4])
fc_dim = 512
fc1 = paddle.layer.fc(input=conv5,
size=fc_dim,
act=paddle.activation.Relu(),
layer_attr=paddle.attr.Extra(drop_rate=0.5))
fc2 = paddle.layer.fc(input=fc1,
size=fc_dim,
act=paddle.activation.Relu(),
layer_attr=paddle.attr.Extra(drop_rate=0.5))
out = paddle.layer.fc(input=fc2,
size=class_dim,
act=paddle.activation.Softmax())
return out
def vgg13(input, class_dim):
nums = [2, 2, 2, 2, 2]
return vgg(input, nums, class_dim)
def vgg16(input, class_dim):
nums = [2, 2, 3, 3, 3]
return vgg(input, nums, class_dim)
def vgg19(input, class_dim):
nums = [2, 2, 4, 4, 4]
return vgg(input, nums, class_dim)
def main():
global ts
paddle.init(use_gpu=False)
image = paddle.layer.data(
name="image", type=paddle.data_type.dense_vector(DATA_DIM))
lbl = paddle.layer.data(
name="label", type=paddle.data_type.integer_value(CLASS_DIM))
extra_layers = None
# NOTE: for v2 distributed training need averaging updates.
learning_rate = 1e-3 / NODE_COUNT
out = vgg16(image, class_dim=CLASS_DIM)
cost = paddle.layer.classification_cost(input=out, label=lbl)
# Create parameters
parameters = paddle.parameters.create(cost)
# Create optimizer
optimizer = paddle.optimizer.Momentum(
momentum=0.9,
regularization=paddle.optimizer.L2Regularization(rate=0.0005 *
BATCH_SIZE),
learning_rate=learning_rate / BATCH_SIZE,
learning_rate_decay_a=0.1,
learning_rate_decay_b=128000 * 35,
learning_rate_schedule="discexp", )
train_reader = paddle.batch(
paddle.reader.shuffle(
cifar.train10(),
# To use other data, replace the above line with:
# reader.train_reader('train.list'),
buf_size=1000),
batch_size=BATCH_SIZE)
test_reader = paddle.batch(
cifar.test10(),
# To use other data, replace the above line with:
# reader.test_reader('val.list'),
batch_size=BATCH_SIZE)
# Create trainer
trainer = paddle.trainer.SGD(cost=cost,
parameters=parameters,
update_equation=optimizer,
extra_layers=extra_layers,
is_local=False)
# End batch and end pass event handler
def event_handler(event):
global ts, ts_pass
if isinstance(event, paddle.event.BeginPass):
ts_pass = time.time()
if isinstance(event, paddle.event.BeginIteration):
ts = time.time()
if isinstance(event, paddle.event.EndIteration):
if event.batch_id % 1 == 0:
print "\nPass %d, Batch %d, Cost %f, %s, spent: %f" % (
event.pass_id, event.batch_id, event.cost, event.metrics,
time.time() - ts)
if isinstance(event, paddle.event.EndPass):
print "Pass %d end, spent: %f" % (event.pass_id,
time.time() - ts_pass)
result = trainer.test(reader=test_reader)
print "\nTest with Pass %d, %s" % (event.pass_id, result.metrics)
trainer.train(
reader=train_reader, num_passes=200, event_handler=event_handler)
if __name__ == '__main__':
main()
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# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""seq2seq model for fluid."""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import numpy as np
import argparse
import time
import distutils.util
import paddle.v2 as paddle
import paddle.fluid as fluid
import paddle.fluid.core as core
import paddle.fluid.framework as framework
from paddle.fluid.executor import Executor
parser = argparse.ArgumentParser(description=__doc__)
parser.add_argument(
"--embedding_dim",
type=int,
default=512,
help="The dimension of embedding table. (default: %(default)d)")
parser.add_argument(
"--encoder_size",
type=int,
default=512,
help="The size of encoder bi-rnn unit. (default: %(default)d)")
parser.add_argument(
"--decoder_size",
type=int,
default=512,
help="The size of decoder rnn unit. (default: %(default)d)")
parser.add_argument(
"--batch_size",
type=int,
default=16,
help="The sequence number of a mini-batch data. (default: %(default)d)")
parser.add_argument(
'--skip_batch_num',
type=int,
default=5,
help='The first num of minibatch num to skip, for better performance test')
parser.add_argument(
'--iterations', type=int, default=80, help='The number of minibatches.')
parser.add_argument(
"--dict_size",
type=int,
default=30000,
help="The dictionary capacity. Dictionaries of source sequence and "
"target dictionary have same capacity. (default: %(default)d)")
parser.add_argument(
"--pass_num",
type=int,
default=2,
help="The pass number to train. (default: %(default)d)")
parser.add_argument(
"--learning_rate",
type=float,
default=0.0002,
help="Learning rate used to train the model. (default: %(default)f)")
parser.add_argument(
"--infer_only", action='store_true', help="If set, run forward only.")
parser.add_argument(
"--beam_size",
type=int,
default=3,
help="The width for beam searching. (default: %(default)d)")
parser.add_argument(
'--device',
type=str,
default='GPU',
choices=['CPU', 'GPU'],
help="The device type.")
parser.add_argument(
"--max_length",
type=int,
default=250,
help="The maximum length of sequence when doing generation. "
"(default: %(default)d)")
parser.add_argument(
'--with_test',
action='store_true',
help='If set, test the testset during training.')
def lstm_step(x_t, hidden_t_prev, cell_t_prev, size):
def linear(inputs):
return fluid.layers.fc(input=inputs, size=size, bias_attr=True)
forget_gate = fluid.layers.sigmoid(x=linear([hidden_t_prev, x_t]))
input_gate = fluid.layers.sigmoid(x=linear([hidden_t_prev, x_t]))
output_gate = fluid.layers.sigmoid(x=linear([hidden_t_prev, x_t]))
cell_tilde = fluid.layers.tanh(x=linear([hidden_t_prev, x_t]))
cell_t = fluid.layers.sums(input=[
fluid.layers.elementwise_mul(
x=forget_gate, y=cell_t_prev), fluid.layers.elementwise_mul(
x=input_gate, y=cell_tilde)
])
hidden_t = fluid.layers.elementwise_mul(
x=output_gate, y=fluid.layers.tanh(x=cell_t))
return hidden_t, cell_t
def seq_to_seq_net(embedding_dim, encoder_size, decoder_size, source_dict_dim,
target_dict_dim, is_generating, beam_size, max_length):
"""Construct a seq2seq network."""
def bi_lstm_encoder(input_seq, gate_size):
# Linear transformation part for input gate, output gate, forget gate
# and cell activation vectors need be done outside of dynamic_lstm.
# So the output size is 4 times of gate_size.
input_forward_proj = fluid.layers.fc(input=input_seq,
size=gate_size * 4,
act=None,
bias_attr=False)
forward, _ = fluid.layers.dynamic_lstm(
input=input_forward_proj, size=gate_size * 4, use_peepholes=False)
input_reversed_proj = fluid.layers.fc(input=input_seq,
size=gate_size * 4,
act=None,
bias_attr=False)
reversed, _ = fluid.layers.dynamic_lstm(
input=input_reversed_proj,
size=gate_size * 4,
is_reverse=True,
use_peepholes=False)
return forward, reversed
src_word_idx = fluid.layers.data(
name='source_sequence', shape=[1], dtype='int64', lod_level=1)
src_embedding = fluid.layers.embedding(
input=src_word_idx,
size=[source_dict_dim, embedding_dim],
dtype='float32')
src_forward, src_reversed = bi_lstm_encoder(
input_seq=src_embedding, gate_size=encoder_size)
encoded_vector = fluid.layers.concat(
input=[src_forward, src_reversed], axis=1)
encoded_proj = fluid.layers.fc(input=encoded_vector,
size=decoder_size,
bias_attr=False)
backward_first = fluid.layers.sequence_pool(
input=src_reversed, pool_type='first')
decoder_boot = fluid.layers.fc(input=backward_first,
size=decoder_size,
bias_attr=False,
act='tanh')
def lstm_decoder_with_attention(target_embedding, encoder_vec, encoder_proj,
decoder_boot, decoder_size):
def simple_attention(encoder_vec, encoder_proj, decoder_state):
decoder_state_proj = fluid.layers.fc(input=decoder_state,
size=decoder_size,
bias_attr=False)
decoder_state_expand = fluid.layers.sequence_expand(
x=decoder_state_proj, y=encoder_proj)
concated = fluid.layers.concat(
input=[encoder_proj, decoder_state_expand], axis=1)
attention_weights = fluid.layers.fc(input=concated,
size=1,
act='tanh',
bias_attr=False)
attention_weights = fluid.layers.sequence_softmax(
input=attention_weights)
weigths_reshape = fluid.layers.reshape(
x=attention_weights, shape=[-1])
scaled = fluid.layers.elementwise_mul(
x=encoder_vec, y=weigths_reshape, axis=0)
context = fluid.layers.sequence_pool(input=scaled, pool_type='sum')
return context
rnn = fluid.layers.DynamicRNN()
cell_init = fluid.layers.fill_constant_batch_size_like(
input=decoder_boot,
value=0.0,
shape=[-1, decoder_size],
dtype='float32')
cell_init.stop_gradient = False
with rnn.block():
current_word = rnn.step_input(target_embedding)
encoder_vec = rnn.static_input(encoder_vec)
encoder_proj = rnn.static_input(encoder_proj)
hidden_mem = rnn.memory(init=decoder_boot, need_reorder=True)
cell_mem = rnn.memory(init=cell_init)
context = simple_attention(encoder_vec, encoder_proj, hidden_mem)
decoder_inputs = fluid.layers.concat(
input=[context, current_word], axis=1)
h, c = lstm_step(decoder_inputs, hidden_mem, cell_mem, decoder_size)
rnn.update_memory(hidden_mem, h)
rnn.update_memory(cell_mem, c)
out = fluid.layers.fc(input=h,
size=target_dict_dim,
bias_attr=True,
act='softmax')
rnn.output(out)
return rnn()
if not is_generating:
trg_word_idx = fluid.layers.data(
name='target_sequence', shape=[1], dtype='int64', lod_level=1)
trg_embedding = fluid.layers.embedding(
input=trg_word_idx,
size=[target_dict_dim, embedding_dim],
dtype='float32')
prediction = lstm_decoder_with_attention(trg_embedding, encoded_vector,
encoded_proj, decoder_boot,
decoder_size)
label = fluid.layers.data(
name='label_sequence', shape=[1], dtype='int64', lod_level=1)
cost = fluid.layers.cross_entropy(input=prediction, label=label)
avg_cost = fluid.layers.mean(x=cost)
feeding_list = ["source_sequence", "target_sequence", "label_sequence"]
return avg_cost, feeding_list
def to_lodtensor(data, place):
seq_lens = [len(seq) for seq in data]
cur_len = 0
lod = [cur_len]
for l in seq_lens:
cur_len += l
lod.append(cur_len)
flattened_data = np.concatenate(data, axis=0).astype("int64")
flattened_data = flattened_data.reshape([len(flattened_data), 1])
lod_t = core.LoDTensor()
lod_t.set(flattened_data, place)
lod_t.set_lod([lod])
return lod_t, lod[-1]
def lodtensor_to_ndarray(lod_tensor):
dims = lod_tensor.get_dims()
ndarray = np.zeros(shape=dims).astype('float32')
for i in xrange(np.product(dims)):
ndarray.ravel()[i] = lod_tensor.get_float_element(i)
return ndarray
def train():
avg_cost, feeding_list = seq_to_seq_net(
args.embedding_dim,
args.encoder_size,
args.decoder_size,
args.dict_size,
args.dict_size,
False,
beam_size=args.beam_size,
max_length=args.max_length)
# clone from default main program
inference_program = fluid.default_main_program().clone()
optimizer = fluid.optimizer.Adam(learning_rate=args.learning_rate)
optimizer.minimize(avg_cost)
fluid.memory_optimize(fluid.default_main_program())
train_batch_generator = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.wmt14.train(args.dict_size), buf_size=1000),
batch_size=args.batch_size)
test_batch_generator = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.wmt14.test(args.dict_size), buf_size=1000),
batch_size=args.batch_size)
place = core.CPUPlace() if args.device == 'CPU' else core.CUDAPlace(0)
exe = Executor(place)
exe.run(framework.default_startup_program())
def do_validation():
total_loss = 0.0
count = 0
for batch_id, data in enumerate(test_batch_generator()):
src_seq = to_lodtensor(map(lambda x: x[0], data), place)[0]
trg_seq = to_lodtensor(map(lambda x: x[1], data), place)[0]
lbl_seq = to_lodtensor(map(lambda x: x[2], data), place)[0]
fetch_outs = exe.run(inference_program,
feed={
feeding_list[0]: src_seq,
feeding_list[1]: trg_seq,
feeding_list[2]: lbl_seq
},
fetch_list=[avg_cost],
return_numpy=False)
total_loss += lodtensor_to_ndarray(fetch_outs[0])[0]
count += 1
return total_loss / count
iters, num_samples, start_time = 0, 0, time.time()
for pass_id in xrange(args.pass_num):
train_accs = []
train_losses = []
for batch_id, data in enumerate(train_batch_generator()):
if iters == args.skip_batch_num:
start_time = time.time()
num_samples = 0
if iters == args.iterations:
break
src_seq, word_num = to_lodtensor(map(lambda x: x[0], data), place)
num_samples += word_num
trg_seq, word_num = to_lodtensor(map(lambda x: x[1], data), place)
num_samples += word_num
lbl_seq, _ = to_lodtensor(map(lambda x: x[2], data), place)
fetch_outs = exe.run(framework.default_main_program(),
feed={
feeding_list[0]: src_seq,
feeding_list[1]: trg_seq,
feeding_list[2]: lbl_seq
},
fetch_list=[avg_cost])
iters += 1
loss = np.array(fetch_outs[0])
print(
"Pass = %d, Iter = %d, Loss = %f" % (pass_id, iters, loss)
) # The accuracy is the accumulation of batches, but not the current batch.
train_elapsed = time.time() - start_time
examples_per_sec = num_samples / train_elapsed
print('\nTotal examples: %d, total time: %.5f, %.5f examples/sed\n' %
(num_samples, train_elapsed, examples_per_sec))
# evaluation
if args.with_test:
test_loss = do_validation()
exit(0)
def infer():
pass
def print_arguments(args):
print('----------- seq2seq Configuration Arguments -----------')
for arg, value in sorted(vars(args).iteritems()):
print('%s: %s' % (arg, value))
print('------------------------------------------------')
if __name__ == '__main__':
args = parser.parse_args()
print_arguments(args)
if args.infer_only:
infer()
else:
train()
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import numpy as np
import argparse
import time
import paddle.v2 as paddle
import paddle.fluid as fluid
import paddle.fluid.profiler as profiler
SEED = 1
DTYPE = "float32"
# random seed must set before configuring the network.
# fluid.default_startup_program().random_seed = SEED
def parse_args():
parser = argparse.ArgumentParser("mnist model benchmark.")
parser.add_argument(
'--batch_size', type=int, default=128, help='The minibatch size.')
parser.add_argument(
'--skip_batch_num',
type=int,
default=5,
help='The first num of minibatch num to skip, for better performance test'
)
parser.add_argument(
'--iterations', type=int, default=35, help='The number of minibatches.')
parser.add_argument(
'--pass_num', type=int, default=5, help='The number of passes.')
parser.add_argument(
'--device',
type=str,
default='GPU',
choices=['CPU', 'GPU'],
help='The device type.')
parser.add_argument(
'--infer_only', action='store_true', help='If set, run forward only.')
parser.add_argument(
'--use_cprof', action='store_true', help='If set, use cProfile.')
parser.add_argument(
'--use_nvprof',
action='store_true',
help='If set, use nvprof for CUDA.')
parser.add_argument(
'--with_test',
action='store_true',
help='If set, test the testset during training.')
args = parser.parse_args()
return args
def cnn_model(data):
conv_pool_1 = fluid.nets.simple_img_conv_pool(
input=data,
filter_size=5,
num_filters=20,
pool_size=2,
pool_stride=2,
act="relu")
conv_pool_2 = fluid.nets.simple_img_conv_pool(
input=conv_pool_1,
filter_size=5,
num_filters=50,
pool_size=2,
pool_stride=2,
act="relu")
# TODO(dzhwinter) : refine the initializer and random seed settting
SIZE = 10
input_shape = conv_pool_2.shape
param_shape = [reduce(lambda a, b: a * b, input_shape[1:], 1)] + [SIZE]
scale = (2.0 / (param_shape[0]**2 * SIZE))**0.5
predict = fluid.layers.fc(
input=conv_pool_2,
size=SIZE,
act="softmax",
param_attr=fluid.param_attr.ParamAttr(
initializer=fluid.initializer.NormalInitializer(
loc=0.0, scale=scale)))
return predict
def eval_test(exe, batch_acc, batch_size_tensor, inference_program):
test_reader = paddle.batch(
paddle.dataset.mnist.test(), batch_size=args.batch_size)
test_pass_acc = fluid.average.WeightedAverage()
for batch_id, data in enumerate(test_reader()):
img_data = np.array(map(lambda x: x[0].reshape([1, 28, 28]),
data)).astype(DTYPE)
y_data = np.array(map(lambda x: x[1], data)).astype("int64")
y_data = y_data.reshape([len(y_data), 1])
acc, weight = exe.run(inference_program,
feed={"pixel": img_data,
"label": y_data},
fetch_list=[batch_acc, batch_size_tensor])
test_pass_acc.add(value=acc, weight=weight)
pass_acc = test_pass_acc.eval()
return pass_acc
def run_benchmark(model, args):
if args.use_cprof:
pr = cProfile.Profile()
pr.enable()
start_time = time.time()
# Input data
images = fluid.layers.data(name='pixel', shape=[1, 28, 28], dtype=DTYPE)
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
# Train program
predict = model(images)
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
# Evaluator
batch_size_tensor = fluid.layers.create_tensor(dtype='int64')
batch_acc = fluid.layers.accuracy(
input=predict, label=label, total=batch_size_tensor)
# inference program
inference_program = fluid.default_main_program().clone()
# Optimization
opt = fluid.optimizer.AdamOptimizer(
learning_rate=0.001, beta1=0.9, beta2=0.999)
opt.minimize(avg_cost)
fluid.memory_optimize(fluid.default_main_program())
# Initialize executor
place = fluid.CPUPlace() if args.device == 'CPU' else fluid.CUDAPlace(0)
exe = fluid.Executor(place)
# Parameter initialization
exe.run(fluid.default_startup_program())
# Reader
train_reader = paddle.batch(
paddle.dataset.mnist.train(), batch_size=args.batch_size)
accuracy = fluid.metrics.Accuracy()
iters, num_samples, start_time = 0, 0, time.time()
for pass_id in range(args.pass_num):
accuracy.reset()
train_accs = []
train_losses = []
for batch_id, data in enumerate(train_reader()):
if iters == args.skip_batch_num:
start_time = time.time()
num_samples = 0
if iters == args.iterations:
break
img_data = np.array(
map(lambda x: x[0].reshape([1, 28, 28]), data)).astype(DTYPE)
y_data = np.array(map(lambda x: x[1], data)).astype("int64")
y_data = y_data.reshape([len(y_data), 1])
outs = exe.run(
fluid.default_main_program(),
feed={"pixel": img_data,
"label": y_data},
fetch_list=[avg_cost, batch_acc, batch_size_tensor]
) # The accuracy is the accumulation of batches, but not the current batch.
accuracy.update(value=outs[1], weight=outs[2])
iters += 1
num_samples += len(y_data)
loss = np.array(outs[0])
acc = np.array(outs[1])
train_losses.append(loss)
train_accs.append(acc)
print("Pass: %d, Iter: %d, Loss: %f, Accuracy: %f" %
(pass_id, iters, loss, acc))
print("Pass: %d, Loss: %f, Train Accuray: %f\n" %
(pass_id, np.mean(train_losses), np.mean(train_accs)))
train_elapsed = time.time() - start_time
examples_per_sec = num_samples / train_elapsed
print('\nTotal examples: %d, total time: %.5f, %.5f examples/sed\n' %
(num_samples, train_elapsed, examples_per_sec))
# evaluation
if args.with_test:
test_avg_acc = eval_test(exe, batch_acc, batch_size_tensor,
inference_program)
exit(0)
def print_arguments(args):
vars(args)['use_nvprof'] = (vars(args)['use_nvprof'] and
vars(args)['device'] == 'GPU')
print('----------- mnist Configuration Arguments -----------')
for arg, value in sorted(vars(args).iteritems()):
print('%s: %s' % (arg, value))
print('------------------------------------------------')
if __name__ == '__main__':
args = parse_args()
print_arguments(args)
if args.use_nvprof and args.device == 'GPU':
with profiler.cuda_profiler("cuda_profiler.txt", 'csv') as nvprof:
run_benchmark(cnn_model, args)
else:
run_benchmark(cnn_model, args)
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import argparse
import functools
import numpy as np
import time
import cProfile, pstats, StringIO
import paddle.v2 as paddle
import paddle.fluid as fluid
import paddle.fluid.core as core
import paddle.fluid.profiler as profiler
def parse_args():
parser = argparse.ArgumentParser('Convolution model benchmark.')
parser.add_argument(
'--model',
type=str,
choices=['resnet_imagenet', 'resnet_cifar10'],
default='resnet_imagenet',
help='The model architecture.')
parser.add_argument(
'--batch_size', type=int, default=32, help='The minibatch size.')
parser.add_argument(
'--use_fake_data',
action='store_true',
help='use real data or fake data')
parser.add_argument(
'--skip_batch_num',
type=int,
default=5,
help='The first num of minibatch num to skip, for better performance test'
)
parser.add_argument(
'--iterations', type=int, default=80, help='The number of minibatches.')
parser.add_argument(
'--pass_num', type=int, default=100, help='The number of passes.')
parser.add_argument(
'--data_format',
type=str,
default='NCHW',
choices=['NCHW', 'NHWC'],
help='The data data_format, now only support NCHW.')
parser.add_argument(
'--device',
type=str,
default='GPU',
choices=['CPU', 'GPU'],
help='The device type.')
parser.add_argument(
'--data_set',
type=str,
default='flowers',
choices=['cifar10', 'flowers'],
help='Optional dataset for benchmark.')
parser.add_argument(
'--infer_only', action='store_true', help='If set, run forward only.')
parser.add_argument(
'--use_cprof', action='store_true', help='If set, use cProfile.')
parser.add_argument(
'--use_nvprof',
action='store_true',
help='If set, use nvprof for CUDA.')
parser.add_argument(
'--with_test',
action='store_true',
help='If set, test the testset during training.')
args = parser.parse_args()
return args
def conv_bn_layer(input, ch_out, filter_size, stride, padding, act='relu'):
conv1 = fluid.layers.conv2d(
input=input,
filter_size=filter_size,
num_filters=ch_out,
stride=stride,
padding=padding,
act=None,
bias_attr=False)
return fluid.layers.batch_norm(input=conv1, act=act)
def shortcut(input, ch_out, stride):
ch_in = input.shape[1] if args.data_format == 'NCHW' else input.shape[-1]
if ch_in != ch_out:
return conv_bn_layer(input, ch_out, 1, stride, 0, None)
else:
return input
def basicblock(input, ch_out, stride):
short = shortcut(input, ch_out, stride)
conv1 = conv_bn_layer(input, ch_out, 3, stride, 1)
conv2 = conv_bn_layer(conv1, ch_out, 3, 1, 1, act=None)
return fluid.layers.elementwise_add(x=short, y=conv2, act='relu')
def bottleneck(input, ch_out, stride):
short = shortcut(input, ch_out * 4, stride)
conv1 = conv_bn_layer(input, ch_out, 1, stride, 0)
conv2 = conv_bn_layer(conv1, ch_out, 3, 1, 1)
conv3 = conv_bn_layer(conv2, ch_out * 4, 1, 1, 0, act=None)
return fluid.layers.elementwise_add(x=short, y=conv3, act='relu')
def layer_warp(block_func, input, ch_out, count, stride):
res_out = block_func(input, ch_out, stride)
for i in range(1, count):
res_out = block_func(res_out, ch_out, 1)
return res_out
def resnet_imagenet(input, class_dim, depth=50, data_format='NCHW'):
cfg = {
18: ([2, 2, 2, 1], basicblock),
34: ([3, 4, 6, 3], basicblock),
50: ([3, 4, 6, 3], bottleneck),
101: ([3, 4, 23, 3], bottleneck),
152: ([3, 8, 36, 3], bottleneck)
}
stages, block_func = cfg[depth]
conv1 = conv_bn_layer(input, ch_out=64, filter_size=7, stride=2, padding=3)
pool1 = fluid.layers.pool2d(
input=conv1, pool_type='avg', pool_size=3, pool_stride=2)
res1 = layer_warp(block_func, pool1, 64, stages[0], 1)
res2 = layer_warp(block_func, res1, 128, stages[1], 2)
res3 = layer_warp(block_func, res2, 256, stages[2], 2)
res4 = layer_warp(block_func, res3, 512, stages[3], 2)
pool2 = fluid.layers.pool2d(
input=res4,
pool_size=7,
pool_type='avg',
pool_stride=1,
global_pooling=True)
out = fluid.layers.fc(input=pool2, size=class_dim, act='softmax')
return out
def resnet_cifar10(input, class_dim, depth=32, data_format='NCHW'):
assert (depth - 2) % 6 == 0
n = (depth - 2) // 6
conv1 = conv_bn_layer(
input=input, ch_out=16, filter_size=3, stride=1, padding=1)
res1 = layer_warp(basicblock, conv1, 16, n, 1)
res2 = layer_warp(basicblock, res1, 32, n, 2)
res3 = layer_warp(basicblock, res2, 64, n, 2)
pool = fluid.layers.pool2d(
input=res3, pool_size=8, pool_type='avg', pool_stride=1)
out = fluid.layers.fc(input=pool, size=class_dim, act='softmax')
return out
def run_benchmark(model, args):
if args.use_cprof:
pr = cProfile.Profile()
pr.enable()
if args.data_set == "cifar10":
class_dim = 10
if args.data_format == 'NCHW':
dshape = [3, 32, 32]
else:
dshape = [32, 32, 3]
else:
class_dim = 102
if args.data_format == 'NCHW':
dshape = [3, 224, 224]
else:
dshape = [224, 224, 3]
input = fluid.layers.data(name='data', shape=dshape, dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
predict = model(input, class_dim)
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
batch_size_tensor = fluid.layers.create_tensor(dtype='int64')
batch_acc = fluid.layers.accuracy(
input=predict, label=label, total=batch_size_tensor)
inference_program = fluid.default_main_program().clone()
with fluid.program_guard(inference_program):
inference_program = fluid.io.get_inference_program(
target_vars=[batch_acc, batch_size_tensor])
optimizer = fluid.optimizer.Momentum(learning_rate=0.01, momentum=0.9)
opts = optimizer.minimize(avg_cost)
fluid.memory_optimize(fluid.default_main_program())
train_reader = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.cifar.train10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.train(),
buf_size=5120),
batch_size=args.batch_size)
test_reader = paddle.batch(
paddle.dataset.cifar.test10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.test(),
batch_size=args.batch_size)
def test(exe):
test_accuracy = fluid.average.WeightedAverage()
for batch_id, data in enumerate(test_reader()):
img_data = np.array(map(lambda x: x[0].reshape(dshape),
data)).astype("float32")
y_data = np.array(map(lambda x: x[1], data)).astype("int64")
y_data = y_data.reshape([-1, 1])
acc, weight = exe.run(inference_program,
feed={"data": img_data,
"label": y_data},
fetch_list=[batch_acc, batch_size_tensor])
test_accuracy.add(value=acc, weight=weight)
return test_accuracy.eval()
place = core.CPUPlace() if args.device == 'CPU' else core.CUDAPlace(0)
exe = fluid.Executor(place)
exe.run(fluid.default_startup_program())
accuracy = fluid.average.WeightedAverage()
if args.use_fake_data:
data = train_reader().next()
image = np.array(map(lambda x: x[0].reshape(dshape), data)).astype(
'float32')
label = np.array(map(lambda x: x[1], data)).astype('int64')
label = label.reshape([-1, 1])
iters, num_samples, start_time = 0, 0, time.time()
for pass_id in range(args.pass_num):
accuracy.reset()
train_accs = []
train_losses = []
for batch_id, data in enumerate(train_reader()):
if iters == args.skip_batch_num:
start_time = time.time()
num_samples = 0
if iters == args.iterations:
break
if not args.use_fake_data:
image = np.array(map(lambda x: x[0].reshape(dshape),
data)).astype('float32')
label = np.array(map(lambda x: x[1], data)).astype('int64')
label = label.reshape([-1, 1])
loss, acc, weight = exe.run(
fluid.default_main_program(),
feed={'data': image,
'label': label},
fetch_list=[avg_cost, batch_acc, batch_size_tensor])
iters += 1
num_samples += len(label)
accuracy.add(value=acc, weight=weight)
train_losses.append(loss)
train_accs.append(acc)
print("Pass: %d, Iter: %d, Loss: %f, Accuracy: %f" %
(pass_id, iters, loss, acc))
print("Pass: %d, Loss: %f, Train Accuray: %f\n" %
(pass_id, np.mean(train_losses), np.mean(train_accs)))
train_elapsed = time.time() - start_time
examples_per_sec = num_samples / train_elapsed
print('\nTotal examples: %d, total time: %.5f, %.5f examples/sed\n' %
(num_samples, train_elapsed, examples_per_sec))
# evaluation
if args.with_test:
pass_test_acc = test(exe)
exit(0)
def print_arguments(args):
vars(args)['use_nvprof'] = (vars(args)['use_nvprof'] and
vars(args)['device'] == 'GPU')
print('----------- resnet Configuration Arguments -----------')
for arg, value in sorted(vars(args).iteritems()):
print('%s: %s' % (arg, value))
print('------------------------------------------------')
if __name__ == '__main__':
model_map = {
'resnet_imagenet': resnet_imagenet,
'resnet_cifar10': resnet_cifar10
}
args = parse_args()
print_arguments(args)
if args.data_format == 'NHWC':
raise ValueError('Only support NCHW data_format now.')
if args.use_nvprof and args.device == 'GPU':
with profiler.cuda_profiler("cuda_profiler.txt", 'csv') as nvprof:
run_benchmark(model_map[args.model], args)
else:
run_benchmark(model_map[args.model], args)
#!/bin/bash
# This script benchmarking the PaddlePaddle Fluid on
# single thread single GPU.
#export FLAGS_fraction_of_gpu_memory_to_use=0.0
export CUDNN_PATH=/paddle/cudnn_v5
# disable openmp and mkl parallel
#https://github.com/PaddlePaddle/Paddle/issues/7199
export MKL_NUM_THREADS=1
export OMP_NUM_THREADS=1
ht=`lscpu |grep "per core"|awk -F':' '{print $2}'|xargs`
if [ $ht -eq 1 ]; then # HT is OFF
if [ -z "$KMP_AFFINITY" ]; then
export KMP_AFFINITY="granularity=fine,compact,0,0"
fi
if [ -z "$OMP_DYNAMIC" ]; then
export OMP_DYNAMIC="FALSE"
fi
else # HT is ON
if [ -z "$KMP_AFFINITY" ]; then
export KMP_AFFINITY="granularity=fine,compact,1,0"
fi
fi
# disable multi-gpu if have more than one
export CUDA_VISIBLE_DEVICES=0
export LD_LIBRARY_PATH=/usr/local/lib:$LD_LIBRARY_PATH
export LD_LIBRARY_PATH=$CUDNN_PATH:$LD_LIBRARY_PATH
# only query the gpu used
nohup stdbuf -oL nvidia-smi \
--id=${CUDA_VISIBLE_DEVICES} \
--query-gpu=timestamp \
--query-compute-apps=pid,process_name,used_memory \
--format=csv \
--filename=mem.log \
-l 1 &
# mnist
# mnist gpu mnist 128
FLAGS_benchmark=true stdbuf -oL python fluid/mnist.py \
--device=GPU \
--batch_size=128 \
--skip_batch_num=5 \
--iterations=500 \
2>&1 | tee -a mnist_gpu_128.log
# vgg16
# gpu cifar10 128
FLAGS_benchmark=true stdbuf -oL python fluid/vgg16.py \
--device=GPU \
--batch_size=128 \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a vgg16_gpu_128.log
# flowers gpu 128
FLAGS_benchmark=true stdbuf -oL python fluid/vgg16.py \
--device=GPU \
--batch_size=32 \
--data_set=flowers \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a vgg16_gpu_flowers_32.log
# resnet50
# resnet50 gpu cifar10 128
FLAGS_benchmark=true stdbuf -oL python fluid/resnet50.py \
--device=GPU \
--batch_size=128 \
--data_set=cifar10 \
--model=resnet_cifar10 \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a resnet50_gpu_128.log
# resnet50 gpu flowers 64
FLAGS_benchmark=true stdbuf -oL python fluid/resnet50.py \
--device=GPU \
--batch_size=64 \
--data_set=flowers \
--model=resnet_imagenet \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a resnet50_gpu_flowers_64.log
# lstm
# lstm gpu imdb 32 # tensorflow only support batch=32
FLAGS_benchmark=true stdbuf -oL python fluid/stacked_dynamic_lstm.py \
--device=GPU \
--batch_size=32 \
--skip_batch_num=5 \
--iterations=30 \
--hidden_dim=512 \
--emb_dim=512 \
--crop_size=1500 \
2>&1 | tee -a lstm_gpu_32.log
# seq2seq
# seq2seq gpu wmb 128
FLAGS_benchmark=true stdbuf -oL python fluid/machine_translation.py \
--device=GPU \
--batch_size=128 \
--skip_batch_num=5 \
--iterations=30 \
2>&1 | tee -a lstm_gpu_128.log
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import argparse
import cPickle
import os
import random
import time
import numpy
import paddle.v2 as paddle
import paddle.v2.dataset.imdb as imdb
import paddle.fluid as fluid
from paddle.v2 import batch
import paddle.fluid.profiler as profiler
def parse_args():
parser = argparse.ArgumentParser("Understand Sentiment by Dynamic RNN.")
parser.add_argument(
'--batch_size',
type=int,
default=32,
help='The sequence number of a batch data. (default: %(default)d)')
parser.add_argument(
'--skip_batch_num',
type=int,
default=5,
help='The first num of minibatch num to skip, for better performance test'
)
parser.add_argument(
'--iterations', type=int, default=80, help='The number of minibatches.')
parser.add_argument(
'--emb_dim',
type=int,
default=512,
help='Dimension of embedding table. (default: %(default)d)')
parser.add_argument(
'--hidden_dim',
type=int,
default=512,
help='Hidden size of lstm unit. (default: %(default)d)')
parser.add_argument(
'--pass_num',
type=int,
default=100,
help='Epoch number to train. (default: %(default)d)')
parser.add_argument(
'--device',
type=str,
default='CPU',
choices=['CPU', 'GPU'],
help='The device type.')
parser.add_argument(
'--crop_size',
type=int,
default=int(os.environ.get('CROP_SIZE', '1500')),
help='The max sentence length of input. Since this model use plain RNN,'
' Gradient could be explored if sentence is too long')
parser.add_argument(
'--with_test',
action='store_true',
help='If set, test the testset during training.')
args = parser.parse_args()
return args
word_dict = imdb.word_dict()
def crop_sentence(reader, crop_size):
unk_value = word_dict['<unk>']
def __impl__():
for item in reader():
if len([x for x in item[0] if x != unk_value]) < crop_size:
yield item
return __impl__
def main():
args = parse_args()
lstm_size = args.hidden_dim
data = fluid.layers.data(
name="words", shape=[1], lod_level=1, dtype='int64')
sentence = fluid.layers.embedding(
input=data, size=[len(word_dict), args.emb_dim])
sentence = fluid.layers.fc(input=sentence, size=lstm_size, act='tanh')
rnn = fluid.layers.DynamicRNN()
with rnn.block():
word = rnn.step_input(sentence)
prev_hidden = rnn.memory(value=0.0, shape=[lstm_size])
prev_cell = rnn.memory(value=0.0, shape=[lstm_size])
def gate_common(
ipt,
hidden,
size, ):
gate0 = fluid.layers.fc(input=ipt, size=size, bias_attr=True)
gate1 = fluid.layers.fc(input=hidden, size=size, bias_attr=False)
gate = fluid.layers.sums(input=[gate0, gate1])
return gate
forget_gate = fluid.layers.sigmoid(
x=gate_common(word, prev_hidden, lstm_size))
input_gate = fluid.layers.sigmoid(
x=gate_common(word, prev_hidden, lstm_size))
output_gate = fluid.layers.sigmoid(
x=gate_common(word, prev_hidden, lstm_size))
cell_gate = fluid.layers.tanh(
x=gate_common(word, prev_hidden, lstm_size))
cell = fluid.layers.sums(input=[
fluid.layers.elementwise_mul(
x=forget_gate, y=prev_cell), fluid.layers.elementwise_mul(
x=input_gate, y=cell_gate)
])
hidden = fluid.layers.elementwise_mul(
x=output_gate, y=fluid.layers.tanh(x=cell))
rnn.update_memory(prev_cell, cell)
rnn.update_memory(prev_hidden, hidden)
rnn.output(hidden)
last = fluid.layers.sequence_pool(rnn(), 'last')
logit = fluid.layers.fc(input=last, size=2, act='softmax')
loss = fluid.layers.cross_entropy(
input=logit,
label=fluid.layers.data(
name='label', shape=[1], dtype='int64'))
loss = fluid.layers.mean(x=loss)
# add acc
batch_size_tensor = fluid.layers.create_tensor(dtype='int64')
batch_acc = fluid.layers.accuracy(input=logit, label=fluid.layers.data(name='label', \
shape=[1], dtype='int64'), total=batch_size_tensor)
inference_program = fluid.default_main_program().clone()
with fluid.program_guard(inference_program):
inference_program = fluid.io.get_inference_program(
target_vars=[batch_acc, batch_size_tensor])
adam = fluid.optimizer.Adam()
adam.minimize(loss)
fluid.memory_optimize(fluid.default_main_program())
place = fluid.CPUPlace() if args.device == 'CPU' else fluid.CUDAPlace(0)
exe = fluid.Executor(place)
exe.run(fluid.default_startup_program())
train_reader = batch(
paddle.reader.shuffle(
crop_sentence(imdb.train(word_dict), args.crop_size),
buf_size=25000),
batch_size=args.batch_size)
iters, num_samples, start_time = 0, 0, time.time()
for pass_id in range(args.pass_num):
train_accs = []
train_losses = []
for batch_id, data in enumerate(train_reader()):
if iters == args.skip_batch_num:
start_time = time.time()
num_samples = 0
if iters == args.iterations:
break
tensor_words = to_lodtensor([x[0] for x in data], place)
label = numpy.array([x[1] for x in data]).astype("int64")
label = label.reshape((-1, 1))
loss_np, acc, weight = exe.run(
fluid.default_main_program(),
feed={"words": tensor_words,
"label": label},
fetch_list=[loss, batch_acc, batch_size_tensor])
iters += 1
for x in data:
num_samples += len(x[0])
print(
"Pass = %d, Iter = %d, Loss = %f, Accuracy = %f" %
(pass_id, iters, loss_np, acc)
) # The accuracy is the accumulation of batches, but not the current batch.
train_elapsed = time.time() - start_time
examples_per_sec = num_samples / train_elapsed
print('\nTotal examples: %d, total time: %.5f, %.5f examples/sed\n' %
(num_samples, train_elapsed, examples_per_sec))
exit(0)
def to_lodtensor(data, place):
seq_lens = [len(seq) for seq in data]
cur_len = 0
lod = [cur_len]
for l in seq_lens:
cur_len += l
lod.append(cur_len)
flattened_data = numpy.concatenate(data, axis=0).astype("int64")
flattened_data = flattened_data.reshape([len(flattened_data), 1])
res = fluid.LoDTensor()
res.set(flattened_data, place)
res.set_lod([lod])
return res
def print_arguments(args):
print('----------- lstm Configuration Arguments -----------')
for arg, value in sorted(vars(args).iteritems()):
print('%s: %s' % (arg, value))
print('------------------------------------------------')
if __name__ == '__main__':
args = parse_args()
print_arguments(args)
main()
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""VGG16 benchmark in Fluid"""
from __future__ import print_function
import sys
import time
import numpy as np
import paddle.v2 as paddle
import paddle.fluid as fluid
import paddle.fluid.core as core
import argparse
import functools
parser = argparse.ArgumentParser(description=__doc__)
parser.add_argument(
'--batch_size', type=int, default=128, help="Batch size for training.")
parser.add_argument(
'--skip_batch_num',
type=int,
default=5,
help='The first num of minibatch num to skip, for better performance test')
parser.add_argument(
'--iterations', type=int, default=80, help='The number of minibatches.')
parser.add_argument(
'--learning_rate',
type=float,
default=1e-3,
help="Learning rate for training.")
parser.add_argument('--pass_num', type=int, default=50, help="No. of passes.")
parser.add_argument(
'--device',
type=str,
default='GPU',
choices=['CPU', 'GPU'],
help="The device type.")
parser.add_argument(
'--data_format',
type=str,
default='NCHW',
choices=['NCHW', 'NHWC'],
help='The data order, now only support NCHW.')
parser.add_argument(
'--data_set',
type=str,
default='cifar10',
choices=['cifar10', 'flowers'],
help='Optional dataset for benchmark.')
parser.add_argument(
'--with_test',
action='store_true',
help='If set, test the testset during training.')
args = parser.parse_args()
def vgg16_bn_drop(input):
def conv_block(input, num_filter, groups, dropouts):
return fluid.nets.img_conv_group(
input=input,
pool_size=2,
pool_stride=2,
conv_num_filter=[num_filter] * groups,
conv_filter_size=3,
conv_act='relu',
conv_with_batchnorm=True,
conv_batchnorm_drop_rate=dropouts,
pool_type='max')
conv1 = conv_block(input, 64, 2, [0.3, 0])
conv2 = conv_block(conv1, 128, 2, [0.4, 0])
conv3 = conv_block(conv2, 256, 3, [0.4, 0.4, 0])
conv4 = conv_block(conv3, 512, 3, [0.4, 0.4, 0])
conv5 = conv_block(conv4, 512, 3, [0.4, 0.4, 0])
drop = fluid.layers.dropout(x=conv5, dropout_prob=0.5)
fc1 = fluid.layers.fc(input=drop, size=512, act=None)
bn = fluid.layers.batch_norm(input=fc1, act='relu')
drop2 = fluid.layers.dropout(x=bn, dropout_prob=0.5)
fc2 = fluid.layers.fc(input=drop2, size=512, act=None)
return fc2
def main():
if args.data_set == "cifar10":
classdim = 10
if args.data_format == 'NCHW':
data_shape = [3, 32, 32]
else:
data_shape = [32, 32, 3]
else:
classdim = 102
if args.data_format == 'NCHW':
data_shape = [3, 224, 224]
else:
data_shape = [224, 224, 3]
# Input data
images = fluid.layers.data(name='pixel', shape=data_shape, dtype='float32')
label = fluid.layers.data(name='label', shape=[1], dtype='int64')
# Train program
net = vgg16_bn_drop(images)
predict = fluid.layers.fc(input=net, size=classdim, act='softmax')
cost = fluid.layers.cross_entropy(input=predict, label=label)
avg_cost = fluid.layers.mean(x=cost)
# Evaluator
batch_size_tensor = fluid.layers.create_tensor(dtype='int64')
batch_acc = fluid.layers.accuracy(
input=predict, label=label, total=batch_size_tensor)
# inference program
inference_program = fluid.default_main_program().clone()
with fluid.program_guard(inference_program):
inference_program = fluid.io.get_inference_program(
target_vars=[batch_acc, batch_size_tensor])
# Optimization
optimizer = fluid.optimizer.Adam(learning_rate=args.learning_rate)
opts = optimizer.minimize(avg_cost)
fluid.memory_optimize(fluid.default_main_program())
# Initialize executor
place = core.CPUPlace() if args.device == 'CPU' else core.CUDAPlace(0)
exe = fluid.Executor(place)
# Parameter initialization
exe.run(fluid.default_startup_program())
# data reader
train_reader = paddle.batch(
paddle.reader.shuffle(
paddle.dataset.cifar.train10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.train(),
buf_size=5120),
batch_size=args.batch_size)
test_reader = paddle.batch(
paddle.dataset.cifar.test10()
if args.data_set == 'cifar10' else paddle.dataset.flowers.test(),
batch_size=args.batch_size)
# test
def test(exe):
test_accuracy = fluid.average.WeightedAverage()
for batch_id, data in enumerate(test_reader()):
img_data = np.array(map(lambda x: x[0].reshape(data_shape),
data)).astype("float32")
y_data = np.array(map(lambda x: x[1], data)).astype("int64")
y_data = y_data.reshape([-1, 1])
acc, weight = exe.run(inference_program,
feed={"pixel": img_data,
"label": y_data},
fetch_list=[batch_acc, batch_size_tensor])
test_accuracy.add(value=acc, weight=weight)
return test_accuracy.eval()
iters, num_samples, start_time = 0, 0, time.time()
accuracy = fluid.average.WeightedAverage()
for pass_id in range(args.pass_num):
accuracy.reset()
train_accs = []
train_losses = []
for batch_id, data in enumerate(train_reader()):
if iters == args.skip_batch_num:
start_time = time.time()
num_samples = 0
if iters == args.iterations:
break
img_data = np.array(map(lambda x: x[0].reshape(data_shape),
data)).astype("float32")
y_data = np.array(map(lambda x: x[1], data)).astype("int64")
y_data = y_data.reshape([-1, 1])
loss, acc, weight = exe.run(
fluid.default_main_program(),
feed={"pixel": img_data,
"label": y_data},
fetch_list=[avg_cost, batch_acc, batch_size_tensor])
accuracy.add(value=acc, weight=weight)
iters += 1
num_samples += len(y_data)
print(
"Pass = %d, Iter = %d, Loss = %f, Accuracy = %f" %
(pass_id, iters, loss, acc)
) # The accuracy is the accumulation of batches, but not the current batch.
# pass_train_acc = accuracy.eval()
train_losses.append(loss)
train_accs.append(acc)
print("Pass: %d, Loss: %f, Train Accuray: %f\n" %
(pass_id, np.mean(train_losses), np.mean(train_accs)))
train_elapsed = time.time() - start_time
examples_per_sec = num_samples / train_elapsed
print('\nTotal examples: %d, total time: %.5f, %.5f examples/sed\n' %
(num_samples, train_elapsed, examples_per_sec))
# evaluation
if args.with_test:
pass_test_acc = test(exe)
exit(0)
def print_arguments():
print('----------- vgg Configuration Arguments -----------')
for arg, value in sorted(vars(args).iteritems()):
print('%s: %s' % (arg, value))
print('------------------------------------------------')
if __name__ == "__main__":
print_arguments()
main()
#!/usr/bin/env python
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from paddle.trainer_config_helpers import *
......
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import sys
import argparse
import matplotlib.pyplot as plt
def parse_args():
parser = argparse.ArgumentParser('Parse Log')
parser.add_argument(
'--file_path', '-f', type=str, help='the path of the log file')
parser.add_argument(
'--sample_rate',
'-s',
type=float,
default=1.0,
help='the rate to take samples from log')
parser.add_argument(
'--log_period', '-p', type=int, default=1, help='the period of log')
args = parser.parse_args()
return args
def parse_file(file_name):
loss = []
error = []
with open(file_name) as f:
for i, line in enumerate(f):
line = line.strip()
if not line.startswith('pass'):
continue
line_split = line.split(' ')
if len(line_split) != 5:
continue
loss_str = line_split[2][:-1]
cur_loss = float(loss_str.split('=')[-1])
loss.append(cur_loss)
err_str = line_split[3][:-1]
cur_err = float(err_str.split('=')[-1])
error.append(cur_err)
accuracy = [1.0 - err for err in error]
return loss, accuracy
def sample(metric, sample_rate):
interval = int(1.0 / sample_rate)
if interval > len(metric):
return metric[:1]
num = len(metric) / interval
idx = [interval * i for i in range(num)]
metric_sample = [metric[id] for id in idx]
return metric_sample
def plot_metric(metric,
batch_id,
graph_title,
line_style='b-',
line_label='y',
line_num=1):
plt.figure()
plt.title(graph_title)
if line_num == 1:
plt.plot(batch_id, metric, line_style, label=line_label)
else:
for i in range(line_num):
plt.plot(batch_id, metric[i], line_style[i], label=line_label[i])
plt.xlabel('batch')
plt.ylabel(graph_title)
plt.legend()
plt.savefig(graph_title + '.jpg')
plt.close()
def main():
args = parse_args()
assert args.sample_rate > 0. and args.sample_rate <= 1.0, "The sample rate should in the range (0, 1]."
loss, accuracy = parse_file(args.file_path)
batch = [args.log_period * i for i in range(len(loss))]
batch_sample = sample(batch, args.sample_rate)
loss_sample = sample(loss, args.sample_rate)
accuracy_sample = sample(accuracy, args.sample_rate)
plot_metric(loss_sample, batch_sample, 'loss', line_label='loss')
plot_metric(
accuracy_sample,
batch_sample,
'accuracy',
line_style='g-',
line_label='accuracy')
if __name__ == '__main__':
main()
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import io, os
import random
import numpy as np
......
......@@ -8,6 +8,7 @@ function clock_to_seconds() {
}
function infer() {
export OPENBLAS_MAIN_FREE=1
topology=$1
layer_num=$2
bs=$3
......
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from __future__ import print_function
import six.moves.cPickle as pickle
import gzip
......
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import io, os
import random
import numpy as np
......
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from six.moves import xrange # pylint: disable=redefined-builtin
from datetime import datetime
import math
......
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from six.moves import xrange # pylint: disable=redefined-builtin
from datetime import datetime
import math
......
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from six.moves import xrange
from datetime import datetime
import math
......
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from six.moves import xrange # pylint: disable=redefined-builtin
from datetime import datetime
import math
......
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from six.moves import xrange # pylint: disable=redefined-builtin
from datetime import datetime
import math
......
此差异已折叠。
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import argparse
import time
import numpy as np
import tensorflow as tf
import paddle.v2 as paddle
DTYPE = tf.float32
def parse_args():
parser = argparse.ArgumentParser("mnist model benchmark.")
parser.add_argument(
'--batch_size', type=int, default=128, help='The minibatch size.')
parser.add_argument(
'--iterations', type=int, default=35, help='The number of minibatches.')
parser.add_argument(
'--pass_num', type=int, default=5, help='The number of passes.')
parser.add_argument(
'--device',
type=str,
default='GPU',
choices=['CPU', 'GPU'],
help='The device type.')
args = parser.parse_args()
return args
def run_benchmark(args):
def weight_variable(dtype, shape):
initial = tf.truncated_normal(shape, stddev=0.1, dtype=dtype)
return tf.Variable(initial)
def bias_variable(dtype, shape):
initial = tf.constant(0.1, shape=shape, dtype=dtype)
return tf.Variable(initial)
device = '/cpu:0' if args.device == 'CPU' else '/device:GPU:0'
with tf.device(device):
images = tf.placeholder(DTYPE, shape=(None, 28, 28, 1))
labels = tf.placeholder(tf.int64, shape=(None, ))
# conv1, relu, pool1
conv1_weights = weight_variable(DTYPE, [5, 5, 1, 20])
conv1_bias = bias_variable(DTYPE, [20])
conv1 = tf.nn.conv2d(
images, conv1_weights, strides=[1, 1, 1, 1], padding="VALID")
relu1 = tf.nn.relu(tf.nn.bias_add(conv1, conv1_bias))
pool1 = tf.nn.max_pool(
relu1, ksize=[1, 2, 2, 1], strides=[1, 2, 2, 1], padding="VALID")
# conv2, relu, pool2
conv2_weights = weight_variable(DTYPE, [5, 5, 20, 50])
conv2_bias = bias_variable(DTYPE, [50])
conv2 = tf.nn.conv2d(
pool1, conv2_weights, strides=[1, 1, 1, 1], padding="VALID")
relu2 = tf.nn.relu(tf.nn.bias_add(conv2, conv2_bias))
pool2 = tf.nn.max_pool(
relu2, ksize=[1, 2, 2, 1], strides=[1, 2, 2, 1], padding="VALID")
# FC
pool_shape = pool2.get_shape().as_list()
hidden_dim = reduce(lambda a, b: a * b, pool_shape[1:], 1)
reshape = tf.reshape(pool2, shape=(tf.shape(pool2)[0], hidden_dim))
fc_weights = weight_variable(DTYPE, [hidden_dim, 10])
fc_bias = bias_variable(DTYPE, [10])
logits = tf.matmul(reshape, fc_weights) + fc_bias
# Get prediction
prediction = tf.nn.softmax(logits)
# Loss
one_hot_labels = tf.one_hot(labels, depth=10)
cost = -tf.reduce_sum(tf.log(prediction) * one_hot_labels, [1])
avg_cost = tf.reduce_mean(cost)
# Get accuracy
correct = tf.equal(tf.argmax(prediction, 1), labels)
accuracy = tf.reduce_mean(tf.cast(correct, tf.float32))
# metrics, g_accuracy
with tf.variable_scope("reset_metrics_accuracy_scope") as scope:
g_accuracy = tf.metrics.accuracy(
labels, tf.argmax(
prediction, axis=1))
vars = tf.contrib.framework.get_variables(
scope, collection=tf.GraphKeys.LOCAL_VARIABLES)
g_accuracy_reset_op = tf.variables_initializer(vars)
# Optimizer
opt = tf.train.AdamOptimizer(
learning_rate=0.001, beta1=0.9, beta2=0.999)
train_op = opt.minimize(avg_cost)
# train_op = tf.train.AdamOptimizer(1e-4).minimize(avg_cost)
train_reader = paddle.batch(
paddle.dataset.mnist.train(), batch_size=args.batch_size)
test_reader = paddle.batch(
paddle.dataset.mnist.test(), batch_size=args.batch_size)
def eval_test():
sess.run(g_accuracy_reset_op)
for batch_id, data in enumerate(test_reader()):
images_data = np.array(
map(lambda x: np.transpose(x[0].reshape([1, 28, 28]), axes=[1,2,0]), data)).astype("float32")
labels_data = np.array(map(lambda x: x[1], data)).astype("int64")
loss, acc, g_acc = sess.run(
[avg_cost, accuracy, g_accuracy],
feed_dict={images: images_data,
labels: labels_data})
return g_acc[1]
config = tf.ConfigProto(
intra_op_parallelism_threads=1, inter_op_parallelism_threads=1)
config.gpu_options.allow_growth = True
with tf.Session(config=config) as sess:
init_g = tf.global_variables_initializer()
init_l = tf.local_variables_initializer()
sess.run(init_g)
sess.run(init_l)
for pass_id in range(args.pass_num):
sess.run(g_accuracy_reset_op)
pass_start = time.time()
for batch_id, data in enumerate(train_reader()):
images_data = np.array(
map(lambda x: np.transpose(x[0].reshape([1, 28, 28]), axes=[1,2,0]), data)).astype("float32")
labels_data = np.array(map(lambda x: x[1], data)).astype(
"int64")
start = time.time()
_, loss, acc, g_acc = sess.run(
[train_op, avg_cost, accuracy, g_accuracy],
feed_dict={images: images_data,
labels: labels_data})
end = time.time()
print("pass=%d, batch=%d, loss=%f, error=%f, elapse=%f" %
(pass_id, batch_id, loss, 1 - acc, (end - start) / 1000))
pass_end = time.time()
test_avg_acc = eval_test()
print(
"pass=%d, training_avg_accuracy=%f, test_avg_acc=%f, elapse=%f"
% (pass_id, g_acc[1], test_avg_acc,
(pass_end - pass_start) / 1000))
def print_arguments(args):
print('----------- Configuration Arguments -----------')
for arg, value in sorted(vars(args).iteritems()):
print('%s: %s' % (arg, value))
print('------------------------------------------------')
if __name__ == '__main__':
args = parse_args()
print_arguments(args)
run_benchmark(args)
此差异已折叠。
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
import os.path
import io
import numpy as np
......
此差异已折叠。
此差异已折叠。
......@@ -62,29 +62,33 @@ endif()
## Then find the reference-cblas. www.netlib.org/blas/
set(REFERENCE_CBLAS_ROOT $ENV{REFERENCE_CBLAS_ROOT} CACHE PATH
"Folder contains reference-cblas")
set(REFERENCE_CBLAS_INCLUDE_SEARCH_PATHS
${REFERENCE_CBLAS_ROOT}/include
/usr/include
/usr/include/cblas
)
set(REFERENCE_CBLAS_LIB_SEARCH_PATHS
${REFERENCE_CBLAS_ROOT}/lib
/usr/lib
/usr/lib/blas/reference/
/usr/lib/reference/
)
if(NOT CMAKE_CROSSCOMPILING)
set(REFERENCE_CBLAS_INCLUDE_SEARCH_PATHS
${REFERENCE_CBLAS_ROOT}/include
/usr/include
/usr/include/cblas
)
set(REFERENCE_CBLAS_LIB_SEARCH_PATHS
${REFERENCE_CBLAS_ROOT}/lib
/usr/lib
/usr/lib/blas/reference/
/usr/lib/reference/
)
else()
# Disable the finding of reference cblas under host's system path
set(REFERENCE_CBLAS_INCLUDE_SEARCH_PATHS ${REFERENCE_CBLAS_ROOT}/include)
set(REFERENCE_CBLAS_LIB_SEARCH_PATHS ${REFERENCE_CBLAS_ROOT}/lib)
endif()
find_path(REFERENCE_CBLAS_INCLUDE_DIR NAMES cblas.h PATHS
${REFERENCE_CBLAS_INCLUDE_SEARCH_PATHS})
find_library(REFERENCE_CBLAS_LIBRARY NAMES cblas PATHS
${REFERENCE_CBLAS_LIB_SEARCH_PATHS})
if (REFERENCE_CBLAS_INCLUDE_DIR AND REFERENCE_CBLAS_LIBRARY)
if(REFERENCE_CBLAS_INCLUDE_DIR AND REFERENCE_CBLAS_LIBRARY)
set(CBLAS_FOUND ON)
set(CBLAS_PROVIDER REFERENCE)
set(CBLAS_INC_DIR ${REFERENCE_CBLAS_INCLUDE_DIR})
......
此差异已折叠。
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
......
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
......
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
......
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
......
此差异已折叠。
此差异已折叠。
此差异已折叠。
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此差异已折叠。
此差异已折叠。
此差异已折叠。
此差异已折叠。
此差异已折叠。
此差异已折叠。
此差异已折叠。
此差异已折叠。
此差异已折叠。
此差异已折叠。
此差异已折叠。
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