Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into clip_op

paddle/operators/accuracy_op.cu

@@ -12,26 +12,38 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 See the License for the specific language governing permissions and
 limitations under the License. */
 
+#include <thrust/execution_policy.h>
+#include <thrust/reduce.h>
 #include "paddle/operators/accuracy_op.h"
+#include "paddle/platform/cuda_helper.h"
 
 namespace paddle {
 namespace operators {
+using platform::PADDLE_CUDA_NUM_THREADS;
 
-__global__ void AccuracySingleKernel(const int N, const int D, const int top_k,
-                                     const int* Xdata, const int* labelData,
-                                     float* accuracy) {
-  int correct = 0;
-  for (int row = 0; row < N; row++) {
-    const int label = labelData[row];
-    for (int col = 0; col < D; col++) {
-      const int pred = Xdata[row * D + col];
-      if (pred == label) {
-        ++correct;
+template <int BlockSize>
+__global__ void AccuracyCudaKernel(const int N, const int D, const int* Xdata,
+                                   const int* labeldata, float* accuracy) {
+  int count = 0;
+  __shared__ int total[BlockSize];
+
+  // support only 1 block
+  for (int i = threadIdx.x; i < (N); i += BlockSize) {
+    for (int j = 0; j < D; ++j) {
+      if (Xdata[i * D + j] == labeldata[i]) {
+        ++count;
         break;
       }
     }
   }
-  *accuracy = static_cast<float>(correct) / static_cast<float>(N);
+  total[threadIdx.x] = count;
+  __syncthreads();
+
+  // reduce the count with init value 0, and output accuracy.
+  int result = thrust::reduce(thrust::device, total, total + BlockSize, 0);
+  if (threadIdx.x == 0) {
+    *accuracy = static_cast<float>(result) / static_cast<float>(N);
+  }
 }
 
 template <typename T>
@@ -57,8 +69,8 @@ class AccuracyOpCUDAKernel : public framework::OpKernel {
       return;
     }
 
-    AccuracySingleKernel<<<1, 1>>>(num_samples, infer_width, 1, inference_data,
-                                   label_data, accuracy_data);
+    AccuracyCudaKernel<PADDLE_CUDA_NUM_THREADS><<<1, PADDLE_CUDA_NUM_THREADS>>>(
+        num_samples, infer_width, inference_data, label_data, accuracy_data);
   }
 };
 

paddle/operators/fc_op.cc

+/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve.
+
+Licensed under the Apache License, Version 2.0 (the "License");
+you may not use this file except in compliance with the License.
+You may obtain a copy of the License at
+
+    http://www.apache.org/licenses/LICENSE-2.0
+
+Unless required by applicable law or agreed to in writing, software
+distributed under the License is distributed on an "AS IS" BASIS,
+WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+See the License for the specific language governing permissions and
+limitations under the License. */
+
+#include "paddle/framework/op_registry.h"
+#include "paddle/operators/net_op.h"
+
+namespace paddle {
+namespace operators {
+
+class FCOp : public NetOp {
+ public:
+  FCOp(const std::string &type, const framework::VariableNameMap &inputs,
+       const framework::VariableNameMap &outputs,
+       const framework::AttributeMap &attrs)
+      : NetOp(type, inputs, outputs, attrs) {
+    PADDLE_ENFORCE(!Inputs("X").empty(),
+                   "Inputs(X) of FCOp should not be null.");
+    PADDLE_ENFORCE(!Inputs("W").empty(),
+                   "Inputs(W) of FCOp should not be null.");
+    PADDLE_ENFORCE(!Outputs("MulOut").empty(),
+                   "Outputs(MulOut) of FCOp should not be null.");
+    PADDLE_ENFORCE_NE(Output("Out"), framework::kEmptyVarName,
+                      "Output(Out) of FCOp should not be null.");
+
+    auto x = Inputs("X");
+    auto w = Inputs("W");
+    auto mul_out = Outputs("MulOut");
+    PADDLE_ENFORCE_EQ(
+        x.size(), w.size(),
+        "The size of inputs X(%d) should be the same as that of weights W(%d).",
+        x.size(), w.size());
+    PADDLE_ENFORCE_EQ(mul_out.size(), x.size(),
+                      "The size of intermediate mul_out(%d) should be the same "
+                      "as that of inputs X(%d).",
+                      mul_out.size(), x.size());
+
+    size_t n = x.size();
+    PADDLE_ENFORCE_GE(n, static_cast<size_t>(1),
+                      "The size of inputs X(%d) should be no less than 1.", n);
+
+    auto x_num_col_dims = Attr<std::vector<int>>("xNumColDims");
+
+    // Set all values or set no values (use the default value)
+    if (!x_num_col_dims.empty()) {
+      PADDLE_ENFORCE_EQ(x_num_col_dims.size(), n,
+                        "The size of attribute xNumColDims(%d) should be the "
+                        "same as that of inputs X(%d).",
+                        x_num_col_dims.size(), n);
+    } else {
+      x_num_col_dims.resize(n);
+      for (size_t i = 0; i < n; i++) {
+        x_num_col_dims[i] = 1;
+      }
+    }
+
+    // mul_out[i] = X[i] * W[i]
+    for (size_t i = 0; i < n; i++) {
+      framework::AttributeMap mul_attr;
+      mul_attr["x_num_col_dims"] = static_cast<int>(x_num_col_dims[i]);
+      mul_attr["y_num_col_dims"] = static_cast<int>(1);
+      AppendOp(
+          framework::OpRegistry::CreateOp("mul", {{"X", {x[i]}}, {"Y", {w[i]}}},
+                                          {{"Out", {mul_out[i]}}}, mul_attr));
+    }
+
+    // sum_out = X[0] * W[0] + ... + X[n-1] * W[n-1]
+    auto sum_out = mul_out[0];
+    if (n > 1) {
+      PADDLE_ENFORCE_NE(Output("SumOut"), framework::kEmptyVarName,
+                        "Output(SumOut) of FCOp should not be null when the "
+                        "size of Inputs(X) > 1.");
+
+      sum_out = Output("SumOut");
+      AppendOp(framework::OpRegistry::CreateOp("sum", {{"X", {mul_out}}},
+                                               {{"Out", {sum_out}}}, {}));
+    } else {
+      if (Output("SumOut") != framework::kEmptyVarName) {
+        this->Rename(Output("SumOut"), framework::kEmptyVarName);
+      }
+    }
+
+    // add_out = sum_out + b
+    auto b = Input("B");
+    auto add_out = sum_out;
+    if (b != framework::kEmptyVarName) {
+      PADDLE_ENFORCE_NE(
+          Output("AddOut"), framework::kEmptyVarName,
+          "Output(AddOut) of FCOp should not be null when Input(B) is set.");
+
+      add_out = Output("AddOut");
+      AppendOp(framework::OpRegistry::CreateOp(
+          "rowwise_add", {{"X", {sum_out}}, {"b", {Input("B")}}},
+          {{"Out", {add_out}}}, {}));
+    } else {
+      if (Output("AddOut") != framework::kEmptyVarName) {
+        this->Rename(Output("AddOut"), framework::kEmptyVarName);
+      }
+    }
+
+    auto activation = Attr<std::string>("activation");
+    AppendOp(framework::OpRegistry::CreateOp(activation, {{"X", {add_out}}},
+                                             {{"Y", {Output("Out")}}}, {}));
+    CompleteAddOp(false);
+  }
+};
+
+class FCOpMaker : public framework::OpProtoAndCheckerMaker {
+ public:
+  FCOpMaker(framework::OpProto *proto, framework::OpAttrChecker *op_checker)
+      : OpProtoAndCheckerMaker(proto, op_checker) {
+    AddInput("X",
+             "(A vector of Tensors) each input Tensor can be of arbitrary "
+             "dimension, and will be reshaped to a 2-D matrix of size "
+             "(minibatch, number_of_input_features) according to attribute "
+             "xNumColDims.")
+        .AsDuplicable();
+    AddInput("W",
+             "(A vector of Tensors) the weights of FC operator, a "
+             "vector of 2-D matrix of size "
+             "(number_of_input_features, number_of_neurons).")
+        .AsDuplicable();
+    AddInput("B",
+             "(Tensor) the bias of FC operator, a 1-D vector of size "
+             "number_of_neurons.");
+
+    AddOutput("Out",
+              "(Tensor) the activated output matrix of FC operator, a 2-D "
+              "matrix of size (minibatch, number_of_neurons).");
+    AddOutput("MulOut",
+              "(A vector of Tensors) the intermediate outputs of FC operator, "
+              "each Tensor saving the product of X_i * W_i.")
+        .AsIntermediate()
+        .AsDuplicable();
+    AddOutput(
+        "SumOut",
+        "(Tensor) the intermediate output of FC operator, "
+        "saving the sum of the products of X and W, that is sum{X_i * W_i}.")
+        .AsIntermediate();
+    AddOutput("AddOut",
+              "(Tensor) the non-actived output of FC operator, "
+              "saving sum{X_i * W_i} + B.")
+        .AsIntermediate();
+    AddAttr<std::string>(
+        "activation",
+        "(string, default identity) the activation type of FC operator.")
+        .SetDefault("identity")
+        .InEnum({"identity", "sigmoid", "softmax"});
+    AddAttr<std::vector<int>>(
+        "xNumColDims",
+        "(std::vector<int>) The inputs Tensors of FC operator can be of "
+        "more than 2 dimensions. In that case, each input Tensor `X_i` will be "
+        "reshaped to a 2-D matrix. The matrix's first dimension "
+        "(the length of column) will be the product of `X_i`'s last "
+        "`xNumColDims_i` dimensions, that is "
+        "`X_i.dims[0] x ... x X_i.dims[xNumColDims_i - 1]`. "
+        "The matrix's second dimension (the length of row) will be the product "
+        "of `X_i`'s first `rank - xNumColDims_i` dimensions, that is "
+        "`X_i.dims[xNumColDims_i] x ... x X_i.dims[rank - 1]`)")
+        .SetDefault(std::vector<int>{});
+
+    AddComment(R"DOC(
+Fully Connected Operator, known as Fully Connected Layer or Inner Product Layer
+in Convolutional Neural Networks. Neurons in a fully connected layer have
+full connections to all activations in the previous layer.
+It computes an inner product of a set of
+learned weights with a matrix multiplication followed by a bias offset
+(optionally).
+
+Equation:
+  Out = Act(sum_n{X_i * W_i} + B)
+
+where X_i is Tensor that will be reshaped to a 2-D matrix of size (M x K),
+usually M is the minibatch size and K is the number of input features.
+W_i is a 2-D matrix of size (K x N), where N means the number of neurons
+in the fully connected layer. B is a 1-D vector of size N.
+Thus, the output Out is a 2-D matrix of size (M x N).
+Activation type can be set to `identity` (default), `sigmoid` or `softmax`.
+)DOC");
+  }
+};
+
+}  // namespace operators
+}  // namespace paddle
+
+namespace ops = paddle::operators;
+REGISTER_OP_WITHOUT_GRADIENT(fc, ops::FCOp, ops::FCOpMaker);

paddle/operators/identity_op.cc

@@ -27,7 +27,7 @@ class IdentityOpMaker : public framework::OpProtoAndCheckerMaker {
                   framework::OpAttrChecker *op_checker)
       : OpProtoAndCheckerMaker(proto, op_checker) {
     AddInput("X", "The input tensor of identity operator.");
-    AddOutput("Out", "The output tensor of identity operator.");
+    AddOutput("Y", "The output tensor of identity operator.");
     AddComment(R"DOC(
 The identity operator is an alias of the scale operator
 with the attribute scale fixed to 1.0.
@@ -44,12 +44,13 @@ class IdentityOp : public NetOp {
       : NetOp(type, inputs, outputs, attrs) {
     PADDLE_ENFORCE_NE(Input("X"), framework::kEmptyVarName,
                       "Input(X) of IdentityOp should not be null.");
-    PADDLE_ENFORCE_NE(Output("Out"), framework::kEmptyVarName,
-                      "Output(Out) of IdentityOp should not be null.");
+    PADDLE_ENFORCE_NE(Output("Y"), framework::kEmptyVarName,
+                      "Output(Y) of IdentityOp should not be null.");
 
     AppendOp(framework::OpRegistry::CreateOp(
-        "scale", {{"X", {Input("X")}}}, {{"Out", {Output("Out")}}},
+        "scale", {{"X", {Input("X")}}}, {{"Out", {Output("Y")}}},
         {{"scale", static_cast<AttrType>(1)}}));
+    CompleteAddOp(false);
   }
 };
 

paddle/operators/minus_op.cc

@@ -71,7 +71,7 @@ class MinusGradOp : public NetOp {
 
     // x_grad = out_grad
     AppendOp(framework::OpRegistry::CreateOp("identity", {{"X", {out_grad}}},
-                                             {{"Out", {x_grad}}}, {}));
+                                             {{"Y", {x_grad}}}, {}));
 
     framework::AttributeMap scale_attr;
     scale_attr["scale"] = static_cast<AttrType>(-1);

paddle/platform/cuda_helper.h

@@ -24,6 +24,11 @@ namespace platform {
 #define USE_CUDA_ATOMIC(op, T) \
   CUDA_ATOMIC_WRAPPER(op, T) { return atomic##op(address, val); }
 
+// Default thread count per block(or block size).
+// TODO(typhoonzero): need to benchmark against setting this value
+//                    to 1024.
+constexpr int PADDLE_CUDA_NUM_THREADS = 512;
+
 // For atomicAdd.
 USE_CUDA_ATOMIC(Add, float);
 

paddle/pybind/CMakeLists.txt

 if(WITH_PYTHON)
-cc_library(paddle_pybind SHARED
+  cc_library(paddle_pybind SHARED
     SRCS pybind.cc
     DEPS pybind python backward
     ${GLOB_OP_LIB})

python/paddle/v2/framework/tests/op_test.py

@@ -28,10 +28,10 @@ def create_op(scope, op_type, inputs, outputs, attrs):
         if out_name in outputs:
             kwargs[out_name] = []
             if out_dup:
-                sub_in = outputs[out_name]
-                for sub_in_name, _ in sub_in:
-                    var = scope.new_var(sub_in_name)
-                    kwargs[out_name].append(sub_in_name)
+                sub_out = outputs[out_name]
+                for sub_out_name, _ in sub_out:
+                    var = scope.new_var(sub_out_name)
+                    kwargs[out_name].append(sub_out_name)
             else:
                 var = scope.new_var(out_name)
                 kwargs[out_name].append(out_name)
@@ -39,6 +39,7 @@ def create_op(scope, op_type, inputs, outputs, attrs):
     for attr_name in Operator.get_op_attr_names(op_type):
         if attr_name in attrs:
             kwargs[attr_name] = attrs[attr_name]
+
     return Operator(op_type, **kwargs)
 
 
@@ -179,8 +180,9 @@ class OpTest(unittest.TestCase):
     def check_output_with_place(self, place):
         self.scope = core.Scope()
         op_inputs = self.inputs if hasattr(self, "inputs") else dict()
+        op_outputs = self.outputs if hasattr(self, "outputs") else dict()
         op_attrs = self.attrs if hasattr(self, "attrs") else dict()
-        self.op = create_op(self.scope, self.op_type, op_inputs, self.outputs,
+        self.op = create_op(self.scope, self.op_type, op_inputs, op_outputs,
                             op_attrs)
         if isinstance(place, core.GPUPlace) and not self.op.support_gpu():
             return
@@ -192,21 +194,23 @@ class OpTest(unittest.TestCase):
         for out_name, out_dup in Operator.get_op_outputs(self.op.type()):
             if out_dup:
                 sub_out = self.outputs[out_name]
-                for sub_out_name in sub_out:
+                for sub_out_name, sub_out_array in sub_out:
                     actual = np.array(
                         self.scope.find_var(sub_out_name).get_tensor())
-                    expect = sub_out[sub_out_name]
+                    expect = sub_out_array
                     self.assertTrue(
                         np.allclose(
                             actual, expect, atol=1e-05),
-                        "output name: " + out_name + "has diff")
+                        "output name: " + out_name + " has diff")
             else:
-                actual = np.array(self.scope.find_var(out_name).get_tensor())
-                expect = self.outputs[out_name]
-                self.assertTrue(
-                    np.allclose(
-                        actual, expect, atol=1e-05),
-                    "output name: " + out_name + "has diff")
+                var = self.scope.find_var(out_name)
+                if var is not None:
+                    actual = np.array(var.get_tensor())
+                    expect = self.outputs[out_name]
+                    self.assertTrue(
+                        np.allclose(
+                            actual, expect, atol=1e-05),
+                        "output name: " + out_name + " has diff")
 
     def check_output(self):
         places = [core.CPUPlace()]
@@ -241,8 +245,9 @@ class OpTest(unittest.TestCase):
                    max_relative_error=0.005):
         self.scope = core.Scope()
         op_inputs = self.inputs if hasattr(self, "inputs") else dict()
+        op_outputs = self.outputs if hasattr(self, "outputs") else dict()
         op_attrs = self.attrs if hasattr(self, "attrs") else dict()
-        self.op = create_op(self.scope, self.op_type, op_inputs, self.outputs,
+        self.op = create_op(self.scope, self.op_type, op_inputs, op_outputs,
                             op_attrs)
         if no_grad_set is None:
             no_grad_set = set()

python/paddle/v2/framework/tests/test_accuracy_op.py

@@ -6,16 +6,17 @@ from op_test import OpTest
 class TestAccuracyOp(OpTest):
     def setUp(self):
         self.op_type = "accuracy"
-        infer = np.random.randint(0, 2, (32, 1)).astype("int")
-        label = np.random.randint(0, 2, (32, )).astype("int")
+        n = 8192
+        infer = np.random.randint(0, 2, (n, 1)).astype("int")
+        label = np.random.randint(0, 2, (n, )).astype("int")
         self.inputs = {'Inference': infer, "Label": label}
         num_correct = 0
-        for rowid in xrange(32):
+        for rowid in xrange(n):
             for ele in infer[rowid]:
                 if ele == label[rowid]:
                     num_correct += 1
                     break
-        self.outputs = {'Accuracy': [num_correct / 32.0]}
+        self.outputs = {'Accuracy': [num_correct / float(n)]}
 
     def test_check_output(self):
         self.check_output()

python/paddle/v2/framework/tests/test_fc_op.py

+import unittest
+import numpy as np
+from op_test import OpTest
+
+
+class TestFCOp1(OpTest):
+    def setUp(self):
+        x0 = np.random.random((16, 32)).astype("float32")
+        w0 = np.random.random((32, 10)).astype("float32")
+
+        mul_out0 = np.dot(x0, w0)
+        identity_out = mul_out0
+
+        self.op_type = "fc"
+        self.inputs = {"X": [("X0", x0)], "W": [("W0", w0)]}
+        self.outputs = {"MulOut": [("MulOut0", mul_out0)], "Out": identity_out}
+
+    def test_check_output(self):
+        self.check_output()
+
+    def test_check_grad(self):
+        self.check_grad(["X0", "W0"], "Out", max_relative_error=0.01)
+
+
+class TestFCOp2(OpTest):
+    def setUp(self):
+        x0 = np.random.random((16, 4, 8)).astype("float32")
+        x1 = np.random.random((4, 4, 32)).astype("float32")
+        w0 = np.random.random((32, 10)).astype("float32")
+        w1 = np.random.random((32, 10)).astype("float32")
+        b = np.random.random(10).astype("float32")
+
+        mul_out0 = np.dot(x0.reshape(16, 4 * 8), w0)
+        mul_out1 = np.dot(x1.reshape(4 * 4, 32), w1)
+        sum_out = mul_out0 + mul_out1
+        add_out = np.add(sum_out, b)
+        sigmoid_out = 1 / (1 + np.exp(-add_out))
+
+        self.op_type = "fc"
+        self.inputs = {
+            "X": [("X0", x0), ("X1", x1)],
+            "W": [("W0", w0), ("W1", w1)],
+            "B": b
+        }
+        self.attrs = {"xNumColDims": [1, 2], "activation": "sigmoid"}
+        self.outputs = {
+            "MulOut": [("MulOut0", mul_out0), ("MulOut1", mul_out1)],
+            "SumOut": sum_out,
+            "AddOut": add_out,
+            "Out": sigmoid_out
+        }
+
+    def test_check_output(self):
+        self.check_output()
+
+    def test_check_grad(self):
+        self.check_grad(
+            ["X0", "X1", "W0", "W1", "B"], "Out", max_relative_error=0.01)
+
+
+if __name__ == '__main__':
+    unittest.main()

python/paddle/v2/framework/tests/test_identity_op.py

@@ -7,13 +7,13 @@ class TestIdentityOp(OpTest):
     def setUp(self):
         self.op_type = "identity"
         self.inputs = {'X': np.random.random((10, 10)).astype("float32")}
-        self.outputs = {'Out': self.inputs['X']}
+        self.outputs = {'Y': self.inputs['X']}
 
     def test_check_output(self):
         self.check_output()
 
     def test_check_grad(self):
-        self.check_grad(['X'], 'Out')
+        self.check_grad(['X'], 'Y')
 
 
 if __name__ == "__main__":