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提交 d7678df5 编写于 作者: T typhoonzero
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Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into update_docker_docs

上级 70076d08 efa50a45
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.pre-commit-config.yaml
浏览文件 @ d7678df5
......@@ -24,7 +24,7 @@
description: Format files with ClangFormat.
entry: clang-format -i
language: system
files: \.(c|cc|cxx|cpp|h|hpp|hxx)$
files: \.(c|cc|cxx|cpp|cu|h|hpp|hxx|proto)$
- repo: https://github.com/PaddlePaddle/pre-commit-golang
sha: 8337620115c25ff8333f1b1a493bd031049bd7c0
hooks:
......
CMakeLists.txt
浏览文件 @ d7678df5
......@@ -36,8 +36,8 @@ include(simd)
################################ Configurations #######################################
option(WITH_GPU "Compile PaddlePaddle with NVIDIA GPU" ${CUDA_FOUND})
option(WITH_AVX "Compile PaddlePaddle with AVX intrinsics" ${AVX_FOUND})
option(WITH_MKLDNN "Compile PaddlePaddle with mkl-dnn support." OFF)
option(WITH_MKLML "Compile PaddlePaddle with mklml package." OFF)
option(WITH_MKLDNN "Compile PaddlePaddle with mkl-dnn support." ${AVX_FOUND})
option(WITH_MKLML "Compile PaddlePaddle with mklml package." ${AVX_FOUND})
option(WITH_DSO "Compile PaddlePaddle with dynamic linked CUDA" ON)
option(WITH_TESTING "Compile PaddlePaddle with unit testing" ON)
option(WITH_SWIG_PY "Compile PaddlePaddle with inference api" ON)
......
Dockerfile
浏览文件 @ d7678df5
......@@ -27,13 +27,16 @@ RUN apt-get update && \
git python-pip python-dev openssh-server bison \
wget unzip unrar tar xz-utils bzip2 gzip coreutils ntp \
curl sed grep graphviz libjpeg-dev zlib1g-dev \
python-numpy python-matplotlib gcc-4.8 g++-4.8 \
python-matplotlib gcc-4.8 g++-4.8 \
automake locales clang-format-3.8 swig doxygen cmake \
liblapack-dev liblapacke-dev libboost-dev \
clang-3.8 llvm-3.8 libclang-3.8-dev \
net-tools && \
apt-get clean -y
# paddle is using numpy.flip, which is introduced since 1.12.0
RUN pip --no-cache-dir install 'numpy>=1.12.0'
# Install Go and glide
RUN wget -O go.tgz https://storage.googleapis.com/golang/go1.8.1.linux-amd64.tar.gz && \
tar -C /usr/local -xzf go.tgz && \
......
cmake/configure.cmake
浏览文件 @ d7678df5
......@@ -74,8 +74,6 @@ if(WITH_MKLDNN)
set(OPENMP_FLAGS "-fopenmp")
set(CMAKE_C_CREATE_SHARED_LIBRARY_FORBIDDEN_FLAGS ${OPENMP_FLAGS})
set(CMAKE_CXX_CREATE_SHARED_LIBRARY_FORBIDDEN_FLAGS ${OPENMP_FLAGS})
set(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -L${MKLDNN_IOMP_DIR} -liomp5 -Wl,--as-needed")
set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -L${MKLDNN_IOMP_DIR} -liomp5 -Wl,--as-needed")
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OPENMP_FLAGS}")
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OPENMP_FLAGS}")
else()
......
cmake/external/any.cmake
浏览文件 @ d7678df5
......@@ -7,7 +7,7 @@ INCLUDE_DIRECTORIES(${ANY_SOURCE_DIR}/src/extern_lib_any)
ExternalProject_Add(
extern_lib_any
${EXTERNAL_PROJECT_LOG_ARGS}
GIT_REPOSITORY "https://github.com/thelink2012/any.git"
GIT_REPOSITORY "https://github.com/PaddlePaddle/any.git"
GIT_TAG "8fef1e93710a0edf8d7658999e284a1142c4c020"
PREFIX ${ANY_SOURCE_DIR}
UPDATE_COMMAND ""
......
cmake/external/gflags.cmake
浏览文件 @ d7678df5
......@@ -28,7 +28,14 @@ INCLUDE_DIRECTORIES(${GFLAGS_INCLUDE_DIR})
ExternalProject_Add(
extern_gflags
${EXTERNAL_PROJECT_LOG_ARGS}
GIT_REPOSITORY "https://github.com/gflags/gflags.git"
# TODO(yiwang): The annoying warnings mentioned in
# https://github.com/PaddlePaddle/Paddle/issues/3277 are caused by
# gflags. I fired a PR https://github.com/gflags/gflags/pull/230
# to fix it. Before it gets accepted by the gflags team, we use
# my personal fork, which contains above fix, temporarily. Let's
# change this back to the official Github repo once my PR is
# merged.
GIT_REPOSITORY "https://github.com/wangkuiyi/gflags.git"
PREFIX ${GFLAGS_SOURCES_DIR}
UPDATE_COMMAND ""
CMAKE_ARGS -DCMAKE_CXX_COMPILER=${CMAKE_CXX_COMPILER}
......
cmake/external/openblas.cmake
浏览文件 @ d7678df5
......@@ -69,8 +69,13 @@ ENDIF(NOT ${CBLAS_FOUND})
MESSAGE(STATUS "BLAS library: ${CBLAS_LIBRARIES}")
INCLUDE_DIRECTORIES(${CBLAS_INC_DIR})
ADD_LIBRARY(cblas STATIC IMPORTED)
SET_PROPERTY(TARGET cblas PROPERTY IMPORTED_LOCATION ${CBLAS_LIBRARIES})
# FIXME(gangliao): generate cblas target to track all high performance
# linear algebra libraries for cc_library(xxx SRCS xxx.c DEPS cblas)
SET(dummyfile ${CMAKE_CURRENT_BINARY_DIR}/cblas_dummy.c)
FILE(WRITE ${dummyfile} "const char * dummy = \"${dummyfile}\";")
ADD_LIBRARY(cblas STATIC ${dummyfile})
TARGET_LINK_LIBRARIES(cblas ${CBLAS_LIBRARIES})
IF(NOT ${CBLAS_FOUND})
ADD_DEPENDENCIES(cblas extern_openblas)
LIST(APPEND external_project_dependencies cblas)
......
cmake/external/python.cmake
浏览文件 @ d7678df5
......@@ -24,7 +24,6 @@ IF(WITH_PYTHON)
ENDIF(WITH_PYTHON)
SET(py_env "")
SET(USE_VIRTUALENV_FOR_TEST 1)
IF(PYTHONINTERP_FOUND)
find_python_module(pip REQUIRED)
find_python_module(numpy REQUIRED)
......
cmake/flags.cmake
浏览文件 @ d7678df5
......@@ -115,7 +115,7 @@ set(COMMON_FLAGS
-Wno-error=literal-suffix
-Wno-error=sign-compare
-Wno-error=unused-local-typedefs
-Wno-error=parentheses-equality # Warnings in Pybind11
-Wno-error=parentheses-equality # Warnings in pybind11
)
set(GPU_COMMON_FLAGS
......@@ -195,6 +195,7 @@ endif()
# Modern gpu architectures: Pascal
if (CUDA_VERSION VERSION_GREATER "8.0" OR CUDA_VERSION VERSION_EQUAL "8.0")
list(APPEND __arch_flags " -gencode arch=compute_60,code=sm_60")
list(APPEND CUDA_NVCC_FLAGS --expt-relaxed-constexpr)
endif()
# Custom gpu architecture
......
cmake/generic.cmake
浏览文件 @ d7678df5
......@@ -403,3 +403,16 @@ function(py_proto_compile TARGET_NAME)
protobuf_generate_python(py_srcs ${py_proto_compile_SRCS})
add_custom_target(${TARGET_NAME} ALL DEPENDS ${py_srcs})
endfunction()
function(py_test TARGET_NAME)
if(WITH_TESTING)
set(options STATIC static SHARED shared)
set(oneValueArgs "")
set(multiValueArgs SRCS DEPS)
cmake_parse_arguments(py_test "${options}" "${oneValueArgs}" "${multiValueArgs}" ${ARGN})
add_test(NAME ${TARGET_NAME}
COMMAND env PYTHONPATH=${PADDLE_PYTHON_PACKAGE_DIR}
python2 ${py_test_SRCS}
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})
endif()
endfunction()
cmake/util.cmake
浏览文件 @ d7678df5
......@@ -149,9 +149,12 @@ endfunction()
# Create a python unittest using run_python_tests.sh,
# which takes care of making correct running environment
function(add_python_test TEST_NAME)
add_test(NAME ${TEST_NAME}
COMMAND env PADDLE_PACKAGE_DIR=${PADDLE_PYTHON_PACKAGE_DIR}
bash ${PROJ_ROOT}/paddle/scripts/run_python_tests.sh
${USE_VIRTUALENV_FOR_TEST} ${PYTHON_EXECUTABLE} ${ARGN}
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})
foreach(arg ${ARGN})
get_filename_component(py_fn ${arg} NAME_WE)
set(TRG_NAME ${TEST_NAME}_${py_fn})
add_test(NAME ${TRG_NAME}
COMMAND env PYTHONPATH=${PADDLE_PYTHON_PACKAGE_DIR}
python2 ${arg}
WORKING_DIRECTORY ${CMAKE_CURRENT_SOURCE_DIR})
endforeach()
endfunction()
doc/design/mkldnn/README.MD 0 → 100644
浏览文件 @ d7678df5
# Intel® MKL-DNN on PaddlePaddle: Design Doc
我们计划将Intel深度神经网络数学库(**MKL-DNN**\[[1](#references)\])集成到PaddlePaddle，充分展现英特尔平台的优势，有效提升PaddlePaddle在英特尔架构上的性能。
我们短期内的基本目标是：
- 完成常用layer的MKL-DNN实现。
- 完成常见深度神经网络VGG，GoogLeNet 和 ResNet的MKL-DNN实现。
## Contents
- [Overview](#overview)
- [Actions](#actions)
- [CMake](#cmake)
- [Layers](#layers)
- [Activations](#activations)
- [Unit Tests](#unit-tests)
- [Protobuf Messages](#protobuf-messages)
- [Python API](#python-api)
- [Demos](#demos)
- [Benchmarking](#benchmarking)
- [Others](#others)
- [Design Concerns](#design-concerns)
## Overview
我们会把MKL-DNN作为第三方库集成进PaddlePaddle，整体框架图
<div align="center">
<img src="image/overview.png" width=350><br/>
Figure 1. PaddlePaddle on IA.
</div>
## Actions
我们把集成方案大致分为了如下几个方面。
### CMake
我们会在`CMakeLists.txt`中会添加`WITH_MKLDNN`的选项，当设置这个值为`ON`的时候会启用编译MKL-DNN功能。同时会自动开启OpenMP用于提高MKL-DNN的性能。
同时，我们会引入`WITH_MKLML`选项，用于选择是否使用MKL-DNN自带的MKLML安装包。这个安装包可以独立于MKL-DNN使用，但是建议在开启MKL-DNN的同时也打开MKLML的开关，这样才能发挥最好的性能。
所以，我们会在`cmake/external`目录新建`mkldnn.cmake`和`mklml.cmake`文件，它们会在编译PaddlePaddle的时候下载对应的软件包，并放到PaddlePaddle的third party目录中。
**备注**：当`WITH_MKLML=ON`的时候，会优先使用这个包作为PaddlePaddle的CBLAS和LAPACK库，所以会稍微改动`cmake/cblas.cmake`中的逻辑。
### Layers
所有MKL-DNN相关的C++ layers，都会按照PaddlePaddle的目录结构存放在
`paddle/gserver/layers`中，并且文件名都会一以*Mkldnn*开头。
所有MKL-DNN的layers都会继承于一个叫做`MkldnnLayer`的父类，该父类继承于PaddlePaddle的基类`Layer`。
### Activations
由于在PaddlePaddle中，激活函数是独立于layer概念的，所以会在`paddle/gserver/activations`目录下添加一个`MkldnnActivation.h`文件定义一些用于MKL-DNN的接口，实现方法还是会在`ActivationFunction.cpp`文件。
### Unit Tests
会在`paddle/gserver/test`目录下添加`test_Mkldnn.cpp`和`MkldnnTester.*`用于MKL-DNN的测试。
Activation的测试，计划在PaddlePaddle原有的测试文件上直接添加新的测试type。
### Protobuf Messages
根据具体layer的需求可能会在`proto/ModelConfig.proto`里面添加必要的选项。
### Python API
目前只考虑**v1 API**。
计划在`python/paddle/trainer/config_parser.py`里面添加`use_mkldnn`这个选择，方便用户选择使用MKL-DNN的layers。
具体实现方式比如：
```python
use_mkldnn = bool(int(g_command_config_args.get("use_mkldnn", 0)))
if use_mkldnn
self.layer_type = mkldnn_*
```
所有MKL-DNN的layer type会以*mkldnn_*开头，以示区分。
并且可能在`python/paddle/trainer_config_helper`目录下的`activations.py `和`layers.py`里面添加必要的MKL-DNN的接口。
### Demos
会在`v1_api_demo`目录下添加一个`mkldnn`的文件夹，里面放入一些用于MKL-DNN测试的demo脚本。
### Benchmarking
会考虑添加部分逻辑在`benchmark/paddle/image/run.sh`，添加使用MKL-DNN的测试。
### Others
1. 如果在使用MKL-DNN的情况下，会把CPU的Buffer对齐为64。
2. 深入PaddlePaddle，寻找有没有其他可以优化的可能，进一步优化。比如可能会用OpenMP改进SGD的更新性能。
## Design Concerns
为了更好的符合PaddlePaddle的代码风格\[[2](#references)\]，同时又尽可能少的牺牲MKL-DNN的性能\[[3](#references)\]。
我们总结出一些特别需要注意的点：
1. 使用**deviceId_**。为了尽可能少的在父类Layer中添加变量或者函数，我们决定使用已有的`deviceId_`变量来区分layer的属性，定义`-2`为`MkldnnLayer`特有的设备ID。
2. 重写父类Layer的**init**函数，修改`deviceId_`为`-2`，代表这个layer是用于跑在MKL-DNN的环境下。
3. 创建`MkldnnMatrix`，用于管理MKL-DNN会用到的相关memory函数、接口以及会用的到格式信息。
4. 创建`MkldnnBase`，定义一些除了layer和memory相关的类和函数。包括MKL-DNN会用到`MkldnnStream`和`CpuEngine`，和未来可能还会用到`FPGAEngine`等。
5. 在**Argument**里添加两个`MkldnnMatrixPtr`，取名为`mkldnnValue`和`mkldnnGrad`，用于存放`MkldnnLayer`会用到的memory buffer。 并且添加函数cvt(会修改为一个更加合适的函数名)，用于处理"CPU device"和"MKL-DNN device"之间memory的相互转化。
6. 在父类`Layer`中的`getOutput`函数中添加一段逻辑，用于判断`deviceId`，并针对device在MKL-DNN和CPU之间不统一的情况，做一个前期转换。 也就是调用`Argument`的cvt函数把output统一到需要的device上。
7. 在原来的`FLAGS`中添加一个`use_mkldnn`的flag，用于选择是否使用MKL-DNN的相关功能。
## References
1. [Intel Math Kernel Library for Deep Neural Networks (Intel MKL-DNN)](https://github.com/01org/mkl-dnn "Intel MKL-DNN")
2. [原来的方案](https://github.com/PaddlePaddle/Paddle/pull/3096)会引入**nextLayer**的信息。但是在PaddlePaddle中，无论是重构前的layer还是重构后的op，都不会想要知道next layer/op的信息。
3. MKL-DNN的高性能格式与PaddlePaddle原有的`NCHW`不同(PaddlePaddle中的CUDNN部分使用的也是`NCHW`，所以不存在这个问题)，所以需要引入一个转换方法，并且只需要在必要的时候转换这种格式，才能更好的发挥MKL-DNN的性能。
paddle/.set_python_path.sh
浏览文件 @ d7678df5
......@@ -21,22 +21,15 @@
#
# It same as PYTHONPATH=${YOUR_PYTHON_PATH}:$PYTHONPATH {exec...}
#
if ! python -c "import paddle" >/dev/null 2>/dev/null; then
PYPATH=""
set -x
while getopts "d:" opt; do
case $opt in
d)
PYPATH=$OPTARG
;;
esac
done
shift $(($OPTIND - 1))
export PYTHONPATH=$PYPATH:$PYTHONPATH
$@
else
echo "paddle package is already in your PYTHONPATH. But unittest need a clean environment."
echo "Please uninstall paddle package before start unittest. Try to 'pip uninstall paddle'"
exit 1
fi
PYPATH=""
set -x
while getopts "d:" opt; do
case $opt in
d)
PYPATH=$OPTARG
;;
esac
done
shift $(($OPTIND - 1))
export PYTHONPATH=$PYPATH:$PYTHONPATH
$@
paddle/api/test/CMakeLists.txt
浏览文件 @ d7678df5
add_python_test(test_swig_api
testArguments.py testGradientMachine.py testMatrix.py testVector.py testTrain.py testTrainer.py)
py_test(testTrain SRCS testTrain.py)
py_test(testMatrix SRCS testMatrix.py)
py_test(testVector SRCS testVector.py)
py_test(testTrainer SRCS testTrainer.py)
py_test(testArguments SRCS testArguments.py)
py_test(testGradientMachine SRCS testGradientMachine.py)
paddle/cuda/src/hl_batch_transpose.cu
浏览文件 @ d7678df5
......@@ -12,17 +12,15 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
#include "hl_batch_transpose.h"
#include "hl_base.h"
#include "hl_batch_transpose.h"
const int TILE_DIM = 64;
const int BLOCK_ROWS = 16;
// No bank-conflict transpose for a batch of data.
__global__ void batchTransposeNoBankConflicts(real* odata,
const real* idata,
int numSamples, int width,
int height) {
__global__ void batchTransposeNoBankConflicts(
real* odata, const real* idata, int numSamples, int width, int height) {
__shared__ float tile[TILE_DIM][TILE_DIM + 1];
const int x = blockIdx.x * TILE_DIM + threadIdx.x;
......@@ -50,12 +48,12 @@ __global__ void batchTransposeNoBankConflicts(real* odata,
newX] = tile[threadIdx.x][j];
}
void batchTranspose(const real* input, real* output, int width, int height,
int batchSize) {
void batchTranspose(
const real* input, real* output, int width, int height, int batchSize) {
dim3 dimBlock(TILE_DIM, BLOCK_ROWS, 1);
dim3 dimGrid(DIVUP(width, TILE_DIM), DIVUP(height, TILE_DIM), batchSize);
batchTransposeNoBankConflicts<<<dimGrid, dimBlock, 0, STREAM_DEFAULT>>>
(output, input, batchSize, width, height);
batchTransposeNoBankConflicts<<<dimGrid, dimBlock, 0, STREAM_DEFAULT>>>(
output, input, batchSize, width, height);
CHECK_SYNC("batchTranspose failed!");
}
paddle/cuda/src/hl_cuda_aggregate.cu
浏览文件 @ d7678df5
......@@ -12,27 +12,23 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
#include "hl_aggregate.h"
#include "hl_base.h"
#include "hl_cuda.h"
#include "hl_cuda.ph"
#include "hl_aggregate.h"
#include "hl_thread.ph"
#include "hl_matrix_base.cuh"
#include "hl_thread.ph"
#include "paddle/utils/Logging.h"
/**
* @brief matrix row operator.
*/
template<class Agg, int blockSize>
__global__ void KeMatrixRowOp(Agg agg,
real *E,
real *Sum,
int dimN) {
template <class Agg, int blockSize>
__global__ void KeMatrixRowOp(Agg agg, real *E, real *Sum, int dimN) {
__shared__ real sum_s[blockSize];
int cnt = (dimN + blockSize -1) / blockSize;
int rowId = blockIdx.x + blockIdx.y*gridDim.x;
int index = rowId*dimN;
int cnt = (dimN + blockSize - 1) / blockSize;
int rowId = blockIdx.x + blockIdx.y * gridDim.x;
int index = rowId * dimN;
int tid = threadIdx.x;
int lmt = tid;
......@@ -44,7 +40,7 @@ __global__ void KeMatrixRowOp(Agg agg,
sum_s[tid] = tmp;
__syncthreads();
for (int stride = blockSize/2; stride > 0; stride = stride/2) {
for (int stride = blockSize / 2; stride > 0; stride = stride / 2) {
if (tid < stride) {
sum_s[tid] = agg(sum_s[tid], sum_s[tid + stride]);
}
......@@ -58,29 +54,21 @@ __global__ void KeMatrixRowOp(Agg agg,
}
template <class Agg>
void hl_matrix_row_op(Agg agg,
real *A_d,
real *C_d,
int dimM,
int dimN) {
void hl_matrix_row_op(Agg agg, real *A_d, real *C_d, int dimM, int dimN) {
int blocksX = dimM;
int blocksY = 1;
dim3 threads(128, 1);
dim3 grid(blocksX, blocksY);
KeMatrixRowOp<Agg, 128><<< grid, threads, 0, STREAM_DEFAULT >>>
(agg, A_d, C_d, dimN);
KeMatrixRowOp<Agg, 128><<<grid, threads, 0, STREAM_DEFAULT>>>(
agg, A_d, C_d, dimN);
}
void hl_matrix_row_sum(real *A_d, real *C_d, int dimM, int dimN) {
CHECK_NOTNULL(A_d);
CHECK_NOTNULL(C_d);
hl_matrix_row_op(aggregate::sum(),
A_d,
C_d,
dimM,
dimN);
hl_matrix_row_op(aggregate::sum(), A_d, C_d, dimM, dimN);
CHECK_SYNC("hl_matrix_row_sum failed");
}
......@@ -88,11 +76,7 @@ void hl_matrix_row_max(real *A_d, real *C_d, int dimM, int dimN) {
CHECK_NOTNULL(A_d);
CHECK_NOTNULL(C_d);
hl_matrix_row_op(aggregate::max(),
A_d,
C_d,
dimM,
dimN);
hl_matrix_row_op(aggregate::max(), A_d, C_d, dimM, dimN);
CHECK_SYNC("hl_matrix_row_max failed");
}
......@@ -100,23 +84,16 @@ void hl_matrix_row_min(real *A_d, real *C_d, int dimM, int dimN) {
CHECK_NOTNULL(A_d);
CHECK_NOTNULL(C_d);
hl_matrix_row_op(aggregate::min(),
A_d,
C_d,
dimM,
dimN);
hl_matrix_row_op(aggregate::min(), A_d, C_d, dimM, dimN);
CHECK_SYNC("hl_matrix_row_min failed");
}
/**
* @brief matrix column operator.
*/
template<class Agg>
__global__ void KeMatrixColumnOp(Agg agg,
real *E,
real *Sum,
int dimM,
int dimN) {
template <class Agg>
__global__ void KeMatrixColumnOp(
Agg agg, real *E, real *Sum, int dimM, int dimN) {
int rowIdx = blockIdx.x * blockDim.x + threadIdx.x;
real tmp = agg.init();
if (rowIdx < dimN) {
......@@ -127,15 +104,12 @@ __global__ void KeMatrixColumnOp(Agg agg,
}
}
template<class Agg, int blockDimX, int blockDimY>
__global__ void KeMatrixColumnOp_S(Agg agg,
real *E,
real *Sum,
int dimM,
int dimN) {
__shared__ real _sum[blockDimX*blockDimY];
int rowIdx = blockIdx.x * blockDim.x + threadIdx.x;
int index = threadIdx.y;
template <class Agg, int blockDimX, int blockDimY>
__global__ void KeMatrixColumnOp_S(
Agg agg, real *E, real *Sum, int dimM, int dimN) {
__shared__ real _sum[blockDimX * blockDimY];
int rowIdx = blockIdx.x * blockDim.x + threadIdx.x;
int index = threadIdx.y;
real tmp = agg.init();
if (rowIdx < dimN) {
......@@ -144,14 +118,14 @@ __global__ void KeMatrixColumnOp_S(Agg agg,
index += blockDimY;
}
}
_sum[threadIdx.x + threadIdx.y*blockDimX] = tmp;
_sum[threadIdx.x + threadIdx.y * blockDimX] = tmp;
__syncthreads();
if (rowIdx < dimN) {
if (threadIdx.y ==0) {
if (threadIdx.y == 0) {
real tmp = agg.init();
for (int i=0; i < blockDimY; i++) {
tmp = agg(tmp, _sum[threadIdx.x + i*blockDimX]);
for (int i = 0; i < blockDimY; i++) {
tmp = agg(tmp, _sum[threadIdx.x + i * blockDimX]);
}
Sum[rowIdx] = tmp;
}
......@@ -159,25 +133,21 @@ __global__ void KeMatrixColumnOp_S(Agg agg,
}
template <class Agg>
void hl_matrix_column_op(Agg agg,
real *A_d,
real *C_d,
int dimM,
int dimN) {
void hl_matrix_column_op(Agg agg, real *A_d, real *C_d, int dimM, int dimN) {
if (dimN >= 8192) {
int blocksX = (dimN + 128 -1) / 128;
int blocksX = (dimN + 128 - 1) / 128;
int blocksY = 1;
dim3 threads(128, 1);
dim3 grid(blocksX, blocksY);
KeMatrixColumnOp<Agg><<< grid, threads, 0, STREAM_DEFAULT >>>
(agg, A_d, C_d, dimM, dimN);
KeMatrixColumnOp<Agg><<<grid, threads, 0, STREAM_DEFAULT>>>(
agg, A_d, C_d, dimM, dimN);
} else {
int blocksX = (dimN + 32 -1) / 32;
int blocksX = (dimN + 32 - 1) / 32;
int blocksY = 1;
dim3 threads(32, 32);
dim3 grid(blocksX, blocksY);
KeMatrixColumnOp_S<Agg, 32, 32><<< grid, threads, 0, STREAM_DEFAULT>>>
(agg, A_d, C_d, dimM, dimN);
KeMatrixColumnOp_S<Agg, 32, 32><<<grid, threads, 0, STREAM_DEFAULT>>>(
agg, A_d, C_d, dimM, dimN);
}
return;
......@@ -187,11 +157,7 @@ void hl_matrix_column_sum(real *A_d, real *C_d, int dimM, int dimN) {
CHECK_NOTNULL(A_d);
CHECK_NOTNULL(C_d);
hl_matrix_column_op(aggregate::sum(),
A_d,
C_d,
dimM,
dimN);
hl_matrix_column_op(aggregate::sum(), A_d, C_d, dimM, dimN);
CHECK_SYNC("hl_matrix_column_sum failed");
}
......@@ -200,11 +166,7 @@ void hl_matrix_column_max(real *A_d, real *C_d, int dimM, int dimN) {
CHECK_NOTNULL(A_d);
CHECK_NOTNULL(C_d);
hl_matrix_column_op(aggregate::max(),
A_d,
C_d,
dimM,
dimN);
hl_matrix_column_op(aggregate::max(), A_d, C_d, dimM, dimN);
CHECK_SYNC("hl_matrix_column_max failed");
}
......@@ -213,11 +175,7 @@ void hl_matrix_column_min(real *A_d, real *C_d, int dimM, int dimN) {
CHECK_NOTNULL(A_d);
CHECK_NOTNULL(C_d);
hl_matrix_column_op(aggregate::min(),
A_d,
C_d,
dimM,
dimN);
hl_matrix_column_op(aggregate::min(), A_d, C_d, dimM, dimN);
CHECK_SYNC("hl_matrix_column_min failed");
}
......@@ -226,16 +184,16 @@ template <int blockSize>
__global__ void KeVectorSum(real *E, real *Sum, int dimM) {
__shared__ double sum_s[blockSize];
int tid = threadIdx.x;
int index = blockIdx.y*blockDim.x+threadIdx.x;
int index = blockIdx.y * blockDim.x + threadIdx.x;
sum_s[tid] = 0.0f;
while (index < dimM) {
sum_s[tid] += E[index];
index += blockDim.x*gridDim.y;
index += blockDim.x * gridDim.y;
}
__syncthreads();
for (int stride = blockSize/2; stride > 0; stride = stride/2) {
for (int stride = blockSize / 2; stride > 0; stride = stride / 2) {
if (tid < stride) {
sum_s[tid] += sum_s[tid + stride];
}
......@@ -259,38 +217,39 @@ void hl_vector_sum(real *A_d, real *C_h, int dimM) {
dim3 threads(blockSize, 1);
dim3 grid(blocksX, blocksY);
struct _hl_event_st hl_event_st = {.cu_event = t_resource.event};
struct _hl_event_st hl_event_st = {.cu_event = t_resource.event};
hl_event_t hl_event = &hl_event_st;
while (!hl_cuda_event_is_ready(hl_event)) {}
while (!hl_cuda_event_is_ready(hl_event)) {
}
KeVectorSum<128><<< grid, threads, 0, STREAM_DEFAULT >>>
(A_d, t_resource.gpu_mem, dimM);
KeVectorSum<128><<< 1, threads, 0, STREAM_DEFAULT >>>
(t_resource.gpu_mem, t_resource.cpu_mem, 128);
KeVectorSum<128><<<grid, threads, 0, STREAM_DEFAULT>>>(
A_d, t_resource.gpu_mem, dimM);
KeVectorSum<128><<<1, threads, 0, STREAM_DEFAULT>>>(
t_resource.gpu_mem, t_resource.cpu_mem, 128);
hl_memcpy_async(C_h, t_resource.cpu_mem, sizeof(real), HPPL_STREAM_DEFAULT);
hl_stream_record_event(HPPL_STREAM_DEFAULT, hl_event);
hl_stream_synchronize(HPPL_STREAM_DEFAULT);
cudaError_t err = (cudaError_t)hl_get_device_last_error();
CHECK_EQ(cudaSuccess, err)
<< "CUDA error: " << hl_get_device_error_string((size_t)err);
CHECK_EQ(cudaSuccess, err) << "CUDA error: "
<< hl_get_device_error_string((size_t)err);
}
template <int blockSize>
__global__ void KeVectorAbsSum(real *E, real *Sum, int dimM) {
__shared__ double sum_s[blockSize];
int tid = threadIdx.x;
int index = blockIdx.y*blockDim.x+threadIdx.x;
int index = blockIdx.y * blockDim.x + threadIdx.x;
sum_s[tid] = 0.0f;
while (index < dimM) {
sum_s[tid] += abs(E[index]);
index += blockDim.x*gridDim.y;
index += blockDim.x * gridDim.y;
}
__syncthreads();
for (int stride = blockSize/2; stride > 0; stride = stride/2) {
for (int stride = blockSize / 2; stride > 0; stride = stride / 2) {
if (tid < stride) {
sum_s[tid] += sum_s[tid + stride];
}
......@@ -314,20 +273,21 @@ void hl_vector_abs_sum(real *A_d, real *C_h, int dimM) {
dim3 threads(blockSize, 1);
dim3 grid(blocksX, blocksY);
struct _hl_event_st hl_event_st = {.cu_event = t_resource.event};
struct _hl_event_st hl_event_st = {.cu_event = t_resource.event};
hl_event_t hl_event = &hl_event_st;
while (!hl_cuda_event_is_ready(hl_event)) {}
while (!hl_cuda_event_is_ready(hl_event)) {
}
KeVectorAbsSum<128><<< grid, threads, 0, STREAM_DEFAULT >>>
(A_d, t_resource.gpu_mem, dimM);
KeVectorAbsSum<128><<< 1, threads, 0, STREAM_DEFAULT >>>
(t_resource.gpu_mem, t_resource.cpu_mem, 128);
KeVectorAbsSum<128><<<grid, threads, 0, STREAM_DEFAULT>>>(
A_d, t_resource.gpu_mem, dimM);
KeVectorAbsSum<128><<<1, threads, 0, STREAM_DEFAULT>>>(
t_resource.gpu_mem, t_resource.cpu_mem, 128);
hl_memcpy_async(C_h, t_resource.cpu_mem, sizeof(real), HPPL_STREAM_DEFAULT);
hl_stream_record_event(HPPL_STREAM_DEFAULT, hl_event);
hl_stream_synchronize(HPPL_STREAM_DEFAULT);
cudaError_t err = (cudaError_t)hl_get_device_last_error();
CHECK_EQ(cudaSuccess, err)
<< "CUDA error: " << hl_get_device_error_string((size_t)err);
CHECK_EQ(cudaSuccess, err) << "CUDA error: "
<< hl_get_device_error_string((size_t)err);
}
paddle/cuda/src/hl_cuda_cnn.cu
浏览文件 @ d7678df5
此差异已折叠。
paddle/cuda/src/hl_cuda_lstm.cu
浏览文件 @ d7678df5
此差异已折叠。
paddle/cuda/src/hl_cuda_matrix.cu
浏览文件 @ d7678df5
此差异已折叠。
paddle/cuda/src/hl_cuda_sequence.cu
浏览文件 @ d7678df5
......@@ -16,36 +16,36 @@ limitations under the License. */
#include "hl_device_functions.cuh"
#include "paddle/utils/Logging.h"
__global__ void KeMaxSequenceForward(real *input,
const int *sequence,
__global__ void KeMaxSequenceForward(real* input,
const int* sequence,
real* output,
int *index,
int* index,
int numSequences,
int dim) {
int dimIdx = threadIdx.x;
int sequenceId = blockIdx.x;
if (sequenceId >= numSequences) return;
int start = sequence[sequenceId];
int end = sequence[sequenceId+1];
int end = sequence[sequenceId + 1];
for (int i = dimIdx; i < dim; i += blockDim.x) {
real tmp = -HL_FLOAT_MAX;
int tmpId = -1;
for (int insId = start; insId < end; insId++) {
if (tmp < input[insId*dim + i]) {
tmp = input[insId*dim + i];
if (tmp < input[insId * dim + i]) {
tmp = input[insId * dim + i];
tmpId = insId;
}
}
output[sequenceId*dim + i] = tmp;
index[sequenceId*dim + i] = tmpId;
output[sequenceId * dim + i] = tmp;
index[sequenceId * dim + i] = tmpId;
}
}
void hl_max_sequence_forward(real* input,
const int* sequence,
real* output,
int *index,
int* index,
int numSequences,
int dim) {
CHECK_NOTNULL(input);
......@@ -55,29 +55,23 @@ void hl_max_sequence_forward(real* input,
dim3 threads(256, 1);
dim3 grid(numSequences, 1);
KeMaxSequenceForward<<< grid, threads, 0, STREAM_DEFAULT >>>
(input, sequence, output, index, numSequences, dim);
KeMaxSequenceForward<<<grid, threads, 0, STREAM_DEFAULT>>>(
input, sequence, output, index, numSequences, dim);
CHECK_SYNC("hl_max_sequence_forward failed");
}
__global__ void KeMaxSequenceBackward(real *outputGrad,
int *index,
real* inputGrad,
int numSequences,
int dim) {
__global__ void KeMaxSequenceBackward(
real* outputGrad, int* index, real* inputGrad, int numSequences, int dim) {
int idx = threadIdx.x + blockIdx.x * blockDim.x;
int colIdx = idx % dim;
if (idx < numSequences*dim) {
if (idx < numSequences * dim) {
int insId = index[idx];
inputGrad[insId * dim + colIdx] += outputGrad[idx];
}
}
void hl_max_sequence_backward(real* outputGrad,
int *index,
real* inputGrad,
int numSequences,
int dim) {
void hl_max_sequence_backward(
real* outputGrad, int* index, real* inputGrad, int numSequences, int dim) {
CHECK_NOTNULL(outputGrad);
CHECK_NOTNULL(index);
CHECK_NOTNULL(inputGrad);
......@@ -85,12 +79,12 @@ void hl_max_sequence_backward(real* outputGrad,
unsigned int blocks = (numSequences * dim + 128 - 1) / 128;
dim3 threads(128, 1);
dim3 grid(blocks, 1);
KeMaxSequenceBackward<<< grid, threads, 0, STREAM_DEFAULT >>>
(outputGrad, index, inputGrad, numSequences, dim);
KeMaxSequenceBackward<<<grid, threads, 0, STREAM_DEFAULT>>>(
outputGrad, index, inputGrad, numSequences, dim);
CHECK_SYNC("hl_max_sequence_backward failed");
}
template<int blockDimX, int blockDimY, int gridDimX, bool AddRow>
template <int blockDimX, int blockDimY, int gridDimX, bool AddRow>
__global__ void KeMatrixAddRows(real* output,
real* table,
int* ids,
......@@ -104,8 +98,8 @@ __global__ void KeMatrixAddRows(real* output,
while (sampleId < numSamples) {
int tableId = ids[sampleId];
if ((0 <= tableId) && (tableId < tableSize)) {
real *outputData = output + sampleId * dim;
real *tableData = table + tableId * dim;
real* outputData = output + sampleId * dim;
real* tableData = table + tableId * dim;
for (int i = idx; i < dim; i += blockDimX) {
if (AddRow == 0) {
outputData[i] += tableData[i];
......@@ -114,24 +108,27 @@ __global__ void KeMatrixAddRows(real* output,
}
}
}
sampleId += blockDimY*gridDimX;
sampleId += blockDimY * gridDimX;
}
}
template<int blockDimX, int blockDimY, int gridDimX, bool seq2batch, bool isAdd>
__global__
void KeSequence2Batch(real *batch,
real *sequence,
const int *batchIndex,
int seqWidth,
int batchCount) {
template <int blockDimX,
int blockDimY,
int gridDimX,
bool seq2batch,
bool isAdd>
__global__ void KeSequence2Batch(real* batch,
real* sequence,
const int* batchIndex,
int seqWidth,
int batchCount) {
int idx = threadIdx.x;
int idy = threadIdx.y;
int id = blockIdx.x + idy * gridDimX;
while (id < batchCount) {
int seqId = batchIndex[id];
real* batchData = batch + id*seqWidth;
real* seqData = sequence + seqId*seqWidth;
real* batchData = batch + id * seqWidth;
real* seqData = sequence + seqId * seqWidth;
for (int i = idx; i < seqWidth; i += blockDimX) {
if (seq2batch) {
if (isAdd) {
......@@ -147,13 +144,13 @@ void KeSequence2Batch(real *batch,
}
}
}
id += blockDimY*gridDimX;
id += blockDimY * gridDimX;
}
}
void hl_sequence2batch_copy(real *batch,
real *sequence,
const int *batchIndex,
void hl_sequence2batch_copy(real* batch,
real* sequence,
const int* batchIndex,
int seqWidth,
int batchCount,
bool seq2batch) {
......@@ -164,18 +161,18 @@ void hl_sequence2batch_copy(real *batch,
dim3 threads(128, 8);
dim3 grid(8, 1);
if (seq2batch) {
KeSequence2Batch<128, 8, 8, 1, 0><<< grid, threads, 0, STREAM_DEFAULT >>>
(batch, sequence, batchIndex, seqWidth, batchCount);
KeSequence2Batch<128, 8, 8, 1, 0><<<grid, threads, 0, STREAM_DEFAULT>>>(
batch, sequence, batchIndex, seqWidth, batchCount);
} else {
KeSequence2Batch<128, 8, 8, 0, 0><<< grid, threads, 0, STREAM_DEFAULT >>>
(batch, sequence, batchIndex, seqWidth, batchCount);
KeSequence2Batch<128, 8, 8, 0, 0><<<grid, threads, 0, STREAM_DEFAULT>>>(
batch, sequence, batchIndex, seqWidth, batchCount);
}
CHECK_SYNC("hl_sequence2batch_copy failed");
}
void hl_sequence2batch_add(real *batch,
real *sequence,
int *batchIndex,
void hl_sequence2batch_add(real* batch,
real* sequence,
int* batchIndex,
int seqWidth,
int batchCount,
bool seq2batch) {
......@@ -186,23 +183,22 @@ void hl_sequence2batch_add(real *batch,
dim3 threads(128, 8);
dim3 grid(8, 1);
if (seq2batch) {
KeSequence2Batch<128, 8, 8, 1, 1><<< grid, threads, 0, STREAM_DEFAULT >>>
(batch, sequence, batchIndex, seqWidth, batchCount);
KeSequence2Batch<128, 8, 8, 1, 1><<<grid, threads, 0, STREAM_DEFAULT>>>(
batch, sequence, batchIndex, seqWidth, batchCount);
} else {
KeSequence2Batch<128, 8, 8, 0, 1><<< grid, threads, 0, STREAM_DEFAULT >>>
(batch, sequence, batchIndex, seqWidth, batchCount);
KeSequence2Batch<128, 8, 8, 0, 1><<<grid, threads, 0, STREAM_DEFAULT>>>(
batch, sequence, batchIndex, seqWidth, batchCount);
}
CHECK_SYNC("hl_sequence2batch_add failed");
}
template<bool normByTimes, bool seq2batch>
__global__
void KeSequence2BatchPadding(real* batch,
real* sequence,
const int* sequenceStartPositions,
const size_t sequenceWidth,
const size_t maxSequenceLength,
const size_t numSequences) {
template <bool normByTimes, bool seq2batch>
__global__ void KeSequence2BatchPadding(real* batch,
real* sequence,
const int* sequenceStartPositions,
const size_t sequenceWidth,
const size_t maxSequenceLength,
const size_t numSequences) {
int batchIdx = blockIdx.y;
int sequenceStart = sequenceStartPositions[batchIdx];
int sequenceLength = sequenceStartPositions[batchIdx + 1] - sequenceStart;
......@@ -276,37 +272,49 @@ void hl_sequence2batch_copy_padding(real* batch,
if (seq2batch) {
/* sequence -> batch */
if (normByTimes) {
KeSequence2BatchPadding<1, 1><<< grid, threads, 0, STREAM_DEFAULT >>>(
batch, sequence, sequenceStartPositions,
sequenceWidth, maxSequenceLength, numSequences);
KeSequence2BatchPadding<1, 1><<<grid, threads, 0, STREAM_DEFAULT>>>(
batch,
sequence,
sequenceStartPositions,
sequenceWidth,
maxSequenceLength,
numSequences);
} else {
KeSequence2BatchPadding<0, 1><<< grid, threads, 0, STREAM_DEFAULT >>>(
batch, sequence, sequenceStartPositions,
sequenceWidth, maxSequenceLength, numSequences);
KeSequence2BatchPadding<0, 1><<<grid, threads, 0, STREAM_DEFAULT>>>(
batch,
sequence,
sequenceStartPositions,
sequenceWidth,
maxSequenceLength,
numSequences);
}
} else {
/* batch -> sequence */
if (normByTimes) {
KeSequence2BatchPadding<1, 0><<< grid, threads, 0, STREAM_DEFAULT >>>(
batch, sequence, sequenceStartPositions,
sequenceWidth, maxSequenceLength, numSequences);
KeSequence2BatchPadding<1, 0><<<grid, threads, 0, STREAM_DEFAULT>>>(
batch,
sequence,
sequenceStartPositions,
sequenceWidth,
maxSequenceLength,
numSequences);
} else {
KeSequence2BatchPadding<0, 0><<< grid, threads, 0, STREAM_DEFAULT >>>(
batch, sequence, sequenceStartPositions,
sequenceWidth, maxSequenceLength, numSequences);
KeSequence2BatchPadding<0, 0><<<grid, threads, 0, STREAM_DEFAULT>>>(
batch,
sequence,
sequenceStartPositions,
sequenceWidth,
maxSequenceLength,
numSequences);
}
}
CHECK_SYNC("hl_sequence2batch_copy_padding failed");
}
__device__ inline float my_rsqrt(float x) {
return rsqrtf(x);
}
__device__ inline float my_rsqrt(float x) { return rsqrtf(x); }
__device__ inline double my_rsqrt(double x) {
return rsqrt(x);
}
__device__ inline double my_rsqrt(double x) { return rsqrt(x); }
__global__ void KeSequenceAvgForward(real* dst,
real* src,
......@@ -327,8 +335,8 @@ __global__ void KeSequenceAvgForward(real* dst,
for (int i = start; i < end; i++) {
sum += src[i * width + col];
}
sum = mode == 1 ? sum :
(mode == 0 ? sum / seqLength : sum * my_rsqrt((real)seqLength));
sum = mode == 1 ? sum : (mode == 0 ? sum / seqLength
: sum * my_rsqrt((real)seqLength));
dst[gid] += sum;
}
}
......@@ -347,10 +355,10 @@ void hl_sequence_avg_forward(real* dst,
int grid = DIVUP(width * height, 512);
CHECK(mode == 0 || mode == 1 || mode == 2)
<< "mode error in hl_sequence_avg_forward!";
<< "mode error in hl_sequence_avg_forward!";
KeSequenceAvgForward<<< grid, block, 0, STREAM_DEFAULT >>>
(dst, src, starts, height, width, mode);
KeSequenceAvgForward<<<grid, block, 0, STREAM_DEFAULT>>>(
dst, src, starts, height, width, mode);
CHECK_SYNC("hl_sequence_avg_forward failed");
}
......@@ -370,8 +378,8 @@ __global__ void KeSequenceAvgBackward(real* dst,
int seqLength = end - start;
if (seqLength == 0) return;
real grad = src[gid];
grad = mode == 1 ? grad :
(mode == 0 ? grad / seqLength : grad * my_rsqrt((real)seqLength));
grad = mode == 1 ? grad : (mode == 0 ? grad / seqLength
: grad * my_rsqrt((real)seqLength));
for (int i = start; i < end; i++) {
dst[i * width + col] += grad;
}
......@@ -392,9 +400,9 @@ void hl_sequence_avg_backward(real* dst,
int grid = DIVUP(width * height, 512);
CHECK(mode == 0 || mode == 1 || mode == 2)
<< "mode error in hl_sequence_avg_backward!";
<< "mode error in hl_sequence_avg_backward!";
KeSequenceAvgBackward<<< grid, block, 0, STREAM_DEFAULT >>>
(dst, src, starts, height, width, mode);
KeSequenceAvgBackward<<<grid, block, 0, STREAM_DEFAULT>>>(
dst, src, starts, height, width, mode);
CHECK_SYNC("hl_sequence_avg_backward failed");
}
paddle/cuda/src/hl_cuda_sparse.cu
浏览文件 @ d7678df5
此差异已折叠。
paddle/cuda/src/hl_perturbation_util.cu
浏览文件 @ d7678df5
......@@ -12,13 +12,12 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
#include <cmath>
#include <stdlib.h>
#include "hl_cuda.h"
#include "hl_time.h"
#include <cmath>
#include "hl_base.h"
#include "hl_cuda.h"
#include "hl_perturbation_util.cuh"
#include "hl_time.h"
#define _USE_MATH_DEFINES
......@@ -30,10 +29,16 @@ limitations under the License. */
* centerX, centerY: translation.
* sourceX, sourceY: output coordinates in the original image.
*/
__device__ void getTranformCoord(int x, int y, real theta, real scale,
real tgtCenter, real imgCenter,
real centerR, real centerC,
int* sourceX, int* sourceY) {
__device__ void getTranformCoord(int x,
int y,
real theta,
real scale,
real tgtCenter,
real imgCenter,
real centerR,
real centerC,
int* sourceX,
int* sourceY) {
real H[4] = {cosf(-theta), -sinf(-theta), sinf(-theta), cosf(-theta)};
// compute coornidates in the rotated and scaled image
......@@ -57,11 +62,17 @@ __device__ void getTranformCoord(int x, int y, real theta, real scale,
* created by Wei Xu (genome), converted by Jiang Wang
*/
__global__ void kSamplingPatches(const real* imgs, real* targets,
int imgSize, int tgtSize, const int channels,
int samplingRate, const real* thetas,
const real* scales, const int* centerRs,
const int* centerCs, const real padValue,
__global__ void kSamplingPatches(const real* imgs,
real* targets,
int imgSize,
int tgtSize,
const int channels,
int samplingRate,
const real* thetas,
const real* scales,
const int* centerRs,
const int* centerCs,
const real padValue,
const int numImages) {
const int caseIdx = blockIdx.x * 4 + threadIdx.x;
const int pxIdx = blockIdx.y * 128 + threadIdx.y;
......@@ -80,8 +91,15 @@ __global__ void kSamplingPatches(const real* imgs, real* targets,
const int pxY = pxIdx / tgtSize;
int srcPxX, srcPxY;
getTranformCoord(pxX, pxY, thetas[imgIdx], scales[imgIdx], tgtCenter,
imgCenter, centerCs[caseIdx], centerRs[caseIdx], &srcPxX,
getTranformCoord(pxX,
pxY,
thetas[imgIdx],
scales[imgIdx],
tgtCenter,
imgCenter,
centerCs[caseIdx],
centerRs[caseIdx],
&srcPxX,
&srcPxY);
imgs += (imgIdx * imgPixels + srcPxY * imgSize + srcPxX) * channels;
......@@ -100,10 +118,15 @@ __global__ void kSamplingPatches(const real* imgs, real* targets,
*
* created by Wei Xu
*/
void hl_generate_disturb_params(real*& gpuAngle, real*& gpuScaleRatio,
int*& gpuCenterR, int*& gpuCenterC,
int numImages, int imgSize, real rotateAngle,
real scaleRatio, int samplingRate,
void hl_generate_disturb_params(real*& gpuAngle,
real*& gpuScaleRatio,
int*& gpuCenterR,
int*& gpuCenterC,
int numImages,
int imgSize,
real rotateAngle,
real scaleRatio,
int samplingRate,
bool isTrain) {
// The number of output samples.
int numPatches = numImages * samplingRate;
......@@ -123,7 +146,8 @@ void hl_generate_disturb_params(real*& gpuAngle, real*& gpuScaleRatio,
for (int i = 0; i < numImages; i++) {
r_angle[i] =
(rotateAngle * M_PI / 180.0) * (rand() / (RAND_MAX + 1.0) // NOLINT
- 0.5);
-
0.5);
s_ratio[i] =
1 + (rand() / (RAND_MAX + 1.0) - 0.5) * scaleRatio; // NOLINT
}
......@@ -140,8 +164,10 @@ void hl_generate_disturb_params(real*& gpuAngle, real*& gpuScaleRatio,
int pxY =
(int)(real(imgSize - 1) * rand() / (RAND_MAX + 1.0)); // NOLINT
const real H[4] = {cos(-r_angle[i]), -sin(-r_angle[i]),
sin(-r_angle[i]), cos(-r_angle[i])};
const real H[4] = {cos(-r_angle[i]),
-sin(-r_angle[i]),
sin(-r_angle[i]),
cos(-r_angle[i])};
real x = pxX - imgCenter;
real y = pxY - imgCenter;
real xx = H[0] * x + H[1] * y;
......@@ -185,9 +211,12 @@ void hl_generate_disturb_params(real*& gpuAngle, real*& gpuScaleRatio,
delete[] center_c;
}
void hl_conv_random_disturb_with_params(const real* images, int imgSize,
int tgtSize, int channels,
int numImages, int samplingRate,
void hl_conv_random_disturb_with_params(const real* images,
int imgSize,
int tgtSize,
int channels,
int numImages,
int samplingRate,
const real* gpuRotationAngle,
const real* gpuScaleRatio,
const int* gpuCenterR,
......@@ -202,29 +231,59 @@ void hl_conv_random_disturb_with_params(const real* images, int imgSize,
dim3 threadsPerBlock(4, 128);
dim3 numBlocks(DIVUP(numPatches, 4), DIVUP(targetSize, 128));
kSamplingPatches <<<numBlocks, threadsPerBlock>>>
(images, target, imgSize, tgtSize, channels, samplingRate,
gpuRotationAngle, gpuScaleRatio, gpuCenterR, gpuCenterC,
paddingValue, numImages);
kSamplingPatches<<<numBlocks, threadsPerBlock>>>(images,
target,
imgSize,
tgtSize,
channels,
samplingRate,
gpuRotationAngle,
gpuScaleRatio,
gpuCenterR,
gpuCenterC,
paddingValue,
numImages);
hl_device_synchronize();
}
void hl_conv_random_disturb(const real* images, int imgSize,
int tgtSize, int channels, int numImages,
real scaleRatio, real rotateAngle,
int samplingRate, real* gpu_r_angle,
real* gpu_s_ratio, int* gpu_center_r,
int* gpu_center_c, int paddingValue,
bool isTrain, real* targets) {
void hl_conv_random_disturb(const real* images,
int imgSize,
int tgtSize,
int channels,
int numImages,
real scaleRatio,
real rotateAngle,
int samplingRate,
real* gpu_r_angle,
real* gpu_s_ratio,
int* gpu_center_r,
int* gpu_center_c,
int paddingValue,
bool isTrain,
real* targets) {
// generate the random disturbance sequence and the sampling locations
hl_generate_disturb_params(gpu_r_angle, gpu_s_ratio, gpu_center_r,
gpu_center_c, numImages, imgSize, rotateAngle,
scaleRatio, samplingRate, isTrain);
hl_conv_random_disturb_with_params(
images, imgSize, tgtSize, channels, numImages,
samplingRate, gpu_r_angle, gpu_s_ratio,
gpu_center_r, gpu_center_r, paddingValue,
targets);
hl_generate_disturb_params(gpu_r_angle,
gpu_s_ratio,
gpu_center_r,
gpu_center_c,
numImages,
imgSize,
rotateAngle,
scaleRatio,
samplingRate,
isTrain);
hl_conv_random_disturb_with_params(images,
imgSize,
tgtSize,
channels,
numImages,
samplingRate,
gpu_r_angle,
gpu_s_ratio,
gpu_center_r,
gpu_center_r,
paddingValue,
targets);
}
paddle/cuda/src/hl_table_apply.cu
浏览文件 @ d7678df5
......@@ -12,15 +12,16 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
#include "hl_base.h"
#include "hl_device_functions.cuh"
#include "hl_cuda.h"
#include "hl_device_functions.cuh"
#include "paddle/utils/Logging.h"
template<int blockDimX, int blockDimY, int gridDimX, bool AddRow>
__global__ void KeMatrixAddRows(real* output, int ldo,
real* table, int ldt,
template <int blockDimX, int blockDimY, int gridDimX, bool AddRow>
__global__ void KeMatrixAddRows(real* output,
int ldo,
real* table,
int ldt,
int* ids,
int numSamples,
int tableSize,
......@@ -31,8 +32,8 @@ __global__ void KeMatrixAddRows(real* output, int ldo,
while (idy < numSamples) {
int tableId = ids[idy];
if ((0 <= tableId) && (tableId < tableSize)) {
real *out = output + idy * ldo;
real *tab = table + tableId * ldt;
real* out = output + idy * ldo;
real* tab = table + tableId * ldt;
for (int i = idx; i < dim; i += blockDimX) {
if (AddRow) {
paddle::paddleAtomicAdd(&tab[i], out[i]);
......@@ -45,8 +46,10 @@ __global__ void KeMatrixAddRows(real* output, int ldo,
}
}
void hl_matrix_select_rows(real* output, int ldo,
real* table, int ldt,
void hl_matrix_select_rows(real* output,
int ldo,
real* table,
int ldt,
int* ids,
int numSamples,
int tableSize,
......@@ -57,14 +60,16 @@ void hl_matrix_select_rows(real* output, int ldo,
dim3 threads(128, 8);
dim3 grid(8, 1);
KeMatrixAddRows<128, 8, 8, 0><<< grid, threads, 0, STREAM_DEFAULT >>>
(output, ldo, table, ldt, ids, numSamples, tableSize, dim);
KeMatrixAddRows<128, 8, 8, 0><<<grid, threads, 0, STREAM_DEFAULT>>>(
output, ldo, table, ldt, ids, numSamples, tableSize, dim);
CHECK_SYNC("hl_matrix_select_rows failed");
}
void hl_matrix_add_to_rows(real* table, int ldt,
real* input, int ldi,
void hl_matrix_add_to_rows(real* table,
int ldt,
real* input,
int ldi,
int* ids,
int numSamples,
int tableSize,
......@@ -75,16 +80,15 @@ void hl_matrix_add_to_rows(real* table, int ldt,
dim3 threads(128, 8);
dim3 grid(8, 1);
KeMatrixAddRows<128, 8, 8, 1><<< grid, threads, 0, STREAM_DEFAULT >>>
(input, ldi, table, ldt, ids, numSamples, tableSize, dim);
KeMatrixAddRows<128, 8, 8, 1><<<grid, threads, 0, STREAM_DEFAULT>>>(
input, ldi, table, ldt, ids, numSamples, tableSize, dim);
CHECK_SYNC("hl_matrix_add_to_rows failed");
}
template<class T, int blockDimX, int gridDimX>
__global__ void KeVectorSelect(T* dst, int sized,
const T* src, int sizes,
const int* ids, int sizei) {
template <class T, int blockDimX, int gridDimX>
__global__ void KeVectorSelect(
T* dst, int sized, const T* src, int sizes, const int* ids, int sizei) {
int idx = threadIdx.x + blockDimX * blockIdx.x;
while (idx < sizei) {
int index = ids[idx];
......@@ -95,9 +99,8 @@ __global__ void KeVectorSelect(T* dst, int sized,
}
template <class T>
void hl_vector_select_from(T* dst, int sized,
const T* src, int sizes,
const int* ids, int sizei) {
void hl_vector_select_from(
T* dst, int sized, const T* src, int sizes, const int* ids, int sizei) {
CHECK_NOTNULL(dst);
CHECK_NOTNULL(src);
CHECK_NOTNULL(ids);
......@@ -105,18 +108,17 @@ void hl_vector_select_from(T* dst, int sized,
dim3 threads(512, 1);
dim3 grid(8, 1);
KeVectorSelect<T, 512, 8><<< grid, threads, 0, STREAM_DEFAULT >>>
(dst, sized, src, sizes, ids, sizei);
KeVectorSelect<T, 512, 8><<<grid, threads, 0, STREAM_DEFAULT>>>(
dst, sized, src, sizes, ids, sizei);
CHECK_SYNC("hl_vector_select_from failed");
}
template
void hl_vector_select_from(real* dst, int sized,
const real* src, int sizes,
const int* ids, int sizei);
template
void hl_vector_select_from(int* dst, int sized,
const int* src, int sizes,
const int* ids, int sizei);
template void hl_vector_select_from(real* dst,
int sized,
const real* src,
int sizes,
const int* ids,
int sizei);
template void hl_vector_select_from(
int* dst, int sized, const int* src, int sizes, const int* ids, int sizei);
paddle/cuda/src/hl_top_k.cu
浏览文件 @ d7678df5
此差异已折叠。
paddle/framework/attribute.proto
浏览文件 @ d7678df5
......@@ -12,17 +12,17 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
syntax="proto2";
syntax = "proto2";
package paddle.framework;
// Attribute Type for paddle's Op.
// Op contains many attributes. Each type of attributes could be different.
// The AttrType will be shared between AttrDesc and AttrProto.
enum AttrType {
INT = 0;
FLOAT = 1;
STRING = 2;
INTS = 3;
FLOATS = 4;
STRINGS = 5;
INT = 0;
FLOAT = 1;
STRING = 2;
INTS = 3;
FLOATS = 4;
STRINGS = 5;
}
\ No newline at end of file
paddle/framework/op_desc.proto
浏览文件 @ d7678df5
......@@ -12,7 +12,7 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License. */
syntax="proto2";
syntax = "proto2";
package paddle.framework;
import "attribute.proto";
......@@ -22,14 +22,14 @@ import "attribute.proto";
//
// e.g, for scale=3.0: name=scala, type=AttrType.FLOAT, value=3.0
message AttrDesc {
required string name = 1;
required AttrType type = 2;
optional int32 i = 3;
optional float f = 4;
optional string s = 5;
repeated int32 ints = 6;
repeated float floats = 7;
repeated string strings = 8;
required string name = 1;
required AttrType type = 2;
optional int32 i = 3;
optional float f = 4;
optional string s = 5;
repeated int32 ints = 6;
repeated float floats = 7;
repeated string strings = 8;
};
// Protocol Message to describe an Operator.
......@@ -42,15 +42,15 @@ message AttrDesc {
// 3rd-party language can build this proto message and call
// AddOp(const OpDesc& op_desc) of Paddle core to create an Operator.
message OpDesc {
// input names of this Operator.
repeated string inputs = 1;
// input names of this Operator.
repeated string inputs = 1;
// output names of this Operator.
repeated string outputs = 2;
// output names of this Operator.
repeated string outputs = 2;
// type of this Operator, such as "add", "sub", "fc".
required string type = 3;
// type of this Operator, such as "add", "sub", "fc".
required string type = 3;
// Attributes of this Operator. e.g., scale=3.0 in cosine op.
repeated AttrDesc attrs = 4;
// Attributes of this Operator. e.g., scale=3.0 in cosine op.
repeated AttrDesc attrs = 4;
};
\ No newline at end of file
paddle/framework/op_proto.proto
浏览文件 @ d7678df5
......@@ -15,10 +15,11 @@ limitations under the License. */
// Protocol Message for 3rd-party language binding.
//
// Paddle Python package will use `OpProto` to generate op creation methods.
// The op creation methods take user's input and generate `OpDesc` proto message,
// The op creation methods take user's input and generate `OpDesc` proto
// message,
// then pass `OpDesc` to C++ side and create Op pointer.
//
syntax="proto2";
syntax = "proto2";
package paddle.framework;
import "attribute.proto";
......@@ -26,89 +27,90 @@ import "attribute.proto";
// Attribute protocol message for 3rd-party language binding.
// It will store the Op support what attribute and what type.
message AttrProto {
// Supported attribute name. e.g. `scale` for cosine op.
required string name = 1;
// Supported attribute name. e.g. `scale` for cosine op.
required string name = 1;
// Supported attribute type.
required AttrType type = 2;
// Supported attribute type.
required AttrType type = 2;
// Supported attribute comments. It helps 3rd-party language generate doc-string.
required string comment = 3;
// Supported attribute comments. It helps 3rd-party language generate
// doc-string.
required string comment = 3;
// If that attribute is generated, it means the Paddle third language
// binding has responsibility to fill that attribute. End-User should
// not set that attribute.
optional bool generated = 4 [default=false];
// If that attribute is generated, it means the Paddle third language
// binding has responsibility to fill that attribute. End-User should
// not set that attribute.
optional bool generated = 4 [ default = false ];
}
// Input or output message for 3rd-party language binding.
// It contains parameter name and its comments.
message VarProto {
// Input or output name in that op creation function.
// e.g. `cos(a, b, output, ...)`, "a", "b", "output" are names.
required string name = 1;
// The comment for that input. It helps 3rd-party language generate doc-string.
required string comment = 2;
// Is that input/output could be a list or not.
// If so, that Op should write a attributed named `input_format` or
// `output_format`.
//
// e.g.
// If the op is a fc op, the inputs are `X`, `W`, `b`. The `X` and `W`
// could be multiple, so the multiple of `X` and `W` is True, and OpDesc
// will hold a attribute of them.
//
// The Op desc of same fc could be
// {
// "type": "fc",
// "input": ["X1", "X2", "W1", "W2", "b"],
// "output": "fc.out",
// "attrs" : {
// "input_format": [0, 2, 4, 5]
// }
// }
//
optional bool multiple = 3 [default=false];
// It marks that output is a temporary output. That output is not used by
// user, but used by other op internally as input. If other op is not use
// that output, it could be optimized early.
//
// Attribute temporary_index will be set in OpDesc if there is some
// outputs are temporary.
//
// output = [ "xxx.out1", "xxx.tmp", "xxx.out2"],
// attrs = {
// "temporary_index": [1]
// }
optional bool temporary = 4 [default=false];
// The gradient of operator can be ignored immediately
// e.g. operator AddOp, y = x1 + x2, the gradient of dy/dx1, dy/dx2
// can be ignored for the future optimized on graph.
optional bool ignore_gradient = 6;
// Input or output name in that op creation function.
// e.g. `cos(a, b, output, ...)`, "a", "b", "output" are names.
required string name = 1;
// The comment for that input. It helps 3rd-party language generate
// doc-string.
required string comment = 2;
// Is that input/output could be a list or not.
// If so, that Op should write a attributed named `input_format` or
// `output_format`.
//
// e.g.
// If the op is a fc op, the inputs are `X`, `W`, `b`. The `X` and `W`
// could be multiple, so the multiple of `X` and `W` is True, and OpDesc
// will hold a attribute of them.
//
// The Op desc of same fc could be
// {
// "type": "fc",
// "input": ["X1", "X2", "W1", "W2", "b"],
// "output": "fc.out",
// "attrs" : {
// "input_format": [0, 2, 4, 5]
// }
// }
//
optional bool multiple = 3 [ default = false ];
// It marks that output is a temporary output. That output is not used by
// user, but used by other op internally as input. If other op is not use
// that output, it could be optimized early.
//
// Attribute temporary_index will be set in OpDesc if there is some
// outputs are temporary.
//
// output = [ "xxx.out1", "xxx.tmp", "xxx.out2"],
// attrs = {
// "temporary_index": [1]
// }
optional bool temporary = 4 [ default = false ];
// The gradient of operator can be ignored immediately
// e.g. operator AddOp, y = x1 + x2, the gradient of dy/dx1, dy/dx2
// can be ignored for the future optimized on graph.
optional bool ignore_gradient = 6;
}
// Op protocol message for 3rd-party language binding.
// It contains all information for generating op creation method.
message OpProto {
// The input information to generate op creation method.
repeated VarProto inputs = 1;
// The input information to generate op creation method.
repeated VarProto inputs = 1;
// The output information to generate op creation method.
repeated VarProto outputs = 2;
// The output information to generate op creation method.
repeated VarProto outputs = 2;
// The attribute information to generate op creation method.
repeated AttrProto attrs = 3;
// The attribute information to generate op creation method.
repeated AttrProto attrs = 3;
// The comments for that Op. It helps 3rd-party language generate
// doc-string. The whole documentation of that Op is generated by comment,
// inputs, outputs, attrs together.
required string comment = 4;
// The type of that Op.
required string type = 5;
// The comments for that Op. It helps 3rd-party language generate
// doc-string. The whole documentation of that Op is generated by comment,
// inputs, outputs, attrs together.
required string comment = 4;
// The type of that Op.
required string type = 5;
}
paddle/framework/operator.cc
浏览文件 @ d7678df5
......@@ -22,14 +22,14 @@ namespace framework {
template <>
Eigen::DefaultDevice& ExecutionContext::GetEigenDevice<
platform::CPUPlace, Eigen::DefaultDevice>() const {
return *device_context_.get_eigen_device<Eigen::DefaultDevice>();
return *device_context_->get_eigen_device<Eigen::DefaultDevice>();
}
#ifndef PADDLE_ONLY_CPU
template <>
Eigen::GpuDevice&
ExecutionContext::GetEigenDevice<platform::GPUPlace, Eigen::GpuDevice>() const {
return *device_context_.get_eigen_device<Eigen::GpuDevice>();
return *device_context_->get_eigen_device<Eigen::GpuDevice>();
}
#endif
......
paddle/framework/operator.h
浏览文件 @ d7678df5
......@@ -174,7 +174,11 @@ class OperatorContext {
template <typename T>
T* Output(const size_t index) const {
auto var = OutputVar(index);
PADDLE_ENFORCE(var != nullptr, "Output(%d) should not be nullptr", index);
PADDLE_ENFORCE(
var != nullptr,
"Output(%d) not be nullptr, which means variable [%s] does not "
"exist in scope",
index, op_.outputs_[index]);
return var->GetMutable<T>();
}
......@@ -252,7 +256,7 @@ struct EigenDeviceConverter<platform::GPUPlace> {
class ExecutionContext : public OperatorContext {
public:
ExecutionContext(const OperatorBase* op, const Scope& scope,
const platform::DeviceContext& device_context)
const platform::DeviceContext* device_context)
: OperatorContext(op, scope), device_context_(device_context) {}
template <typename PlaceType,
......@@ -260,9 +264,9 @@ class ExecutionContext : public OperatorContext {
typename EigenDeviceConverter<PlaceType>::EigenDeviceType>
DeviceType& GetEigenDevice() const;
platform::Place GetPlace() const { return device_context_.GetPlace(); }
platform::Place GetPlace() const { return device_context_->GetPlace(); }
const platform::DeviceContext& device_context_;
const platform::DeviceContext* device_context_;
};
class OpKernel {
......@@ -311,7 +315,7 @@ class OperatorWithKernel : public OperatorBase {
void Run(const Scope& scope,
const platform::DeviceContext& dev_ctx) const final {
auto& opKernel = AllOpKernels().at(type_).at(OpKernelKey(dev_ctx));
opKernel->Compute(ExecutionContext(this, scope, dev_ctx));
opKernel->Compute(ExecutionContext(this, scope, &dev_ctx));
}
static std::unordered_map<std::string /* op_type */, OpKernelMap>&
......
paddle/framework/operator_test.cc
浏览文件 @ d7678df5
......@@ -157,22 +157,22 @@ class CPUKernalMultiInputsTest : public OpKernel {
ASSERT_EQ(xs[2], "x2");
auto inVar0 = ctx.MultiInputVar("xs");
ASSERT_EQ(inVar0.size(), 3);
ASSERT_EQ(inVar0.size(), 3U);
auto intVar1 = ctx.InputVar("k");
ASSERT_NE(intVar1, nullptr);
auto outVar0 = ctx.MultiOutputVar("ys");
ASSERT_EQ(outVar0.size(), 2);
ASSERT_EQ(outVar0.size(), 2U);
auto inTensor0 = ctx.MultiInput<Tensor>("xs");
ASSERT_EQ(inTensor0.size(), 3);
ASSERT_EQ(inTensor0.size(), 3U);
auto intTensor1 = ctx.Input<Tensor>("k");
ASSERT_NE(intTensor1, nullptr);
auto outTensor0 = ctx.MultiOutput<Tensor>("ys");
ASSERT_EQ(outTensor0.size(), 2);
ASSERT_EQ(outTensor0.size(), 2U);
auto k = ctx.op_.Input("k");
ASSERT_EQ(k, "k0");
......
paddle/function/BufferArgTest.cpp
浏览文件 @ d7678df5
......@@ -32,7 +32,7 @@ TEST(BufferTest, SequenceIdArg) {
sizeOfValuType(VALUE_TYPE_INT32));
SequenceIdArg buffer(memory.getBuf(), shape);
EXPECT_EQ(buffer.data(), memory.getBuf());
EXPECT_EQ(buffer.numSeqs(), 9);
EXPECT_EQ(buffer.numSeqs(), 9U);
}
} // namespace paddle
paddle/function/CosSimOpGpu.cu
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paddle/function/CropOpGpu.cu
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paddle/function/FunctionTest.cpp
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paddle/function/Im2ColOpGpu.cu
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paddle/function/MulOpGpu.cu
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paddle/function/PadOpGpu.cu
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paddle/function/RowConvOpGpu.cu
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paddle/function/TensorTypeTest.cpp
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paddle/gserver/layers/GruCompute.cu
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paddle/math/BaseMatrix.cu
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paddle/math/TrainingAlgorithmOp.cu
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paddle/math/tests/test_Tensor.cu
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paddle/operators/CMakeLists.txt
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paddle/operators/add_op.cc
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paddle/operators/add_op.h
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paddle/operators/cross_entropy_op.h
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paddle/operators/fc_op.cc
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paddle/operators/mean_op.cc
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paddle/operators/mean_op.h
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paddle/operators/mul_op.cc
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paddle/operators/net_op.h
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paddle/operators/recurrent_op.cc
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paddle/operators/sgd_op.cc
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paddle/operators/sgd_op.h
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paddle/operators/sigmoid_op.cc
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paddle/operators/type_alias.h
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paddle/setup.py.in
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