* add update func of auto search

* update unitest

* [Auto Parallel]  Add the unified cluster representation

* [Auto Parallel] Add the graph class for physical mapping

* [Auto Parallel] Add the simple physical mapper

* Set the timeout of the mapper

* Merge the upstream develop unittests cmake files

* Fix a bug of the process group

* Remove mapper unittest from platforms which is not GPU

* Move the instantiation of process group after resharding

* Add the local id for devices

* Update the rank mapping format

* [Auto Parallel] Relaunch with the rank mapping file

* Remove the unnecessary json file

* Avoid entering get_device_proc_info for auto mapping

* Correct the mapper unit test

* Add some comments

* Remove the related files about mapping

* Update the unittest for auto mapping

* Remove unused rank_mapping unittest

* Improve the unittest coverage

* Improve the unittest coverage

* Improve the unittest of relaunch

* Fix the unittest problem in CI

* Improve the unittest of relaunch

* Remove unnecessary statements

* Update the unittest cmakefile

* Correct the cmakefile of auto parallel unittests

* Modify codes based on the new elastic change

* Use the GPUs exclusively in the unittest

* Correct the cmakefile

* Set the timeout of the unittest

* [Auto Parallel]  Add the unified cluster representation

* [Auto Parallel] Add the graph class for physical mapping

* [Auto Parallel] Add the simple physical mapper

* Set the timeout of the mapper

* Merge the upstream develop unittests cmake files

* Fix a bug of the process group

* Remove mapper unittest from platforms which is not GPU

* Move the instantiation of process group after resharding

* Add the local id for devices

* Update the rank mapping format

* Add some comments

* Remove the related files about mapping

* Update the unittest for auto mapping

* Remove unused rank_mapping unittest

* Improve the unittest coverage

* Improve the unittest coverage

* [Auto Parallel]  Add the unified cluster representation

* [Auto Parallel] Add the graph class for physical mapping

* [Auto Parallel] Add the simple physical mapper

* Set the timeout of the mapper

* Merge the upstream develop unittests cmake files

* Fix a bug of the process group

* Remove mapper unittest from platforms which is not GPU

* Move the instantiation of process group after resharding

* Add the local id for devices

* Update the rank mapping format

* Add some comments

* Remove the related files about mapping

* Remove unused rank_mapping unittest

* Improve the unittest coverage

* fix data parallel when VOCAB var in program

* add split_program

* make ut faster

* increase ut timeout

* make result deterministic

* add fuse_all_reduce pass

* add ut framework, update

* fix ut framework

* remove useless code

* add coverage support

* update

* fix CI

* fix some bugs and fix ci coverage

* fix conflict

* fix bug:
1. atten: set the default value of attn_dropout_rate to None
2. ffn: add activation parameter

* add AutoConvert

* add unitest

* amend merge&slice

* amend default dist_attr

* update doc&improve coverage

* add interface dist_context

* tiny modify

* AutoParallel Save&Load

* tiny modi

* update func name

* tiny fix

* add NotImplementedError

* fix doc

* update func name

* update func param

* update interface

* add unitest & modi make_data_unshard

* update unittest

* update unittest

* fix unittest

* fix cmakelist

* update unittest

功能：本PR的目标是提高attention模块的计算性能。
为了减少框架层对op的调度开销，本PR通过在C++层手动实现attention模块，对外提供attention 大op；
为了减少防存开销，本PR采取了两种优化方法：
（1）在q,k,v计算时通过共享输入X，将该处的gemm，transpose和bias add从三次调用减少为一次；
（2）使用kernel融合优化技术，在不同cuda kernel之间通过寄存器传输数据；

将 #35905 和 #35843 PR中新增的的python api接口移到incubate目录下。

* In cpu parallel using gloo, add various length support for SelectedRows

* fix bug

* fix bugs

* fix by code review

* remove timeout

这个PR只包含fused_feedforward前向的代码。

相关kernel实现：fused_dropout_act_bias, fused_residual_dropout_bias, fused_layernorm_residual_dropout_bias

fused_feedforward是一个融合算子，该算子对transformer模型的feed forward层的算子进行融合和封装，使得前端只呈现一个接口，通过融合减少部分访存和kernel launch的时间，以此提升性能。

功能：本PR的目标是提高attention模块的计算性能。
为了减少框架层对op的调度开销，本PR通过在C++层手动实现attention模块，对外提供attention 大op；
为了减少防存开销，本PR采取了两种优化方法：
（1）在q,k,v计算时通过共享输入X，将该处的gemm，transpose和bias add从三次调用减少为一次；
（2）使用kernel融合优化技术，在不同cuda kernel之间通过寄存器传输数据；

* native commit for triple grad of sigmod

* Updated unittests files

* init functional jacobian api

* Updated trible_test func

* Updated gradient_checker & test_script

* finish test with dtype float32

* add float64 test case

* polish code

* use atol=1e-5 with dtype float64

* fix for ci

* set timeout for test_jacobian

* fix dygraph grad to support high differential

* polish API docstring

* Updated gradient checker and some related files

* fix double grad strip error for high differential

* fix double grad strip error for high differential

* Add Sigmoid triple grad tests

* fix dygraph double grad dtype error when calling for high differential senario

* Updated triple grad teses func

* Use np.random to initialize ddx

* Updated triple_grad_check func

* add todo for gradient checker and refine some comments

* remove additional code

* add test for warnging in backward.py

* add tanh triple grad

* format python code

* refine code

* make test_activation_nn_grad test time to 150s
Co-authored-by: Nveyron95 <veyron_wu@163.com>
Co-authored-by: Nlevi131 <limaolin01@baidu.com>

* default dist op

* add dist_attr for dist op

* add unitest

* update inputname

* update function name

* add unitest

* update CMakeLists.txt for CI

* fix dis_matmul

* fix compile error

* update matmul to matmul_v2

* unify api

* unify api

* todo

* update distop forward func

* update distop forward func

* auto parallel backward

* update dist op

* autoparallel backward

* add backward for embedding

* temp1

* temp2

* temp3

* temp4

* backward done1

* backward done2

* backward done3

* dist embedding remove mp mode

* dist matmul remove mp mode

* update dist embedding
『

* dist op init1

* dist op init 2

* update unitest

* context remove parallel mode

* partitioner remove parallel mode

* update unitest

* a more general method to support varying mesh in pipeline parallel

* support varying mesh in pipeline parallel

* embedding support varying mesh in pipeline parallel

* matmul support varying mesh in pipeline parallel

* default dist op support varying mesh in pipeline parallel

* dist attribute for startup program

* default dist op support varying mesh in pipeline parallel 2

* partitoner support varying mesh in pipeline parallel

* revise logic for auto compeletion

* revise framework.py

* revise reshard unitest

* revise unitest for parallelize

* chmod

* fixed bug for dist embedding name mapping
Co-authored-by: Nzhaoyingli <zhaoyingli@baidu.com>

* Add auto parallel cost model and unittests

* Fixed code styles.

* Fixed bugs and codes style

* fixed typo

* Improved code style: object encapsulation.

* Fixed codes.

* Refractored estimate_cost

* Fixed typo

Add paddle.nn.functional.sparse_attention API

    本个PR主要将sparse_attention功能在python层进行了一层封装，OP的主体代码见：#PR35676

    此外，对于封装的python 接口，增加了相应的单测。

* add reshard module

* fix conflict

* update reshard module

* update and add unitest

* update reshard module and unitest

* add more unitests

* Add new API tensordot

* Set timeout value 400 for UT; Fix format for EN docs

* Set timeout value 1000 for UT; Fix format for EN docs

* Remove some input check

* Coding style improve: don't compare boolean values to True or False
using ==

* fix raw optim

* pre-commit test file
Co-authored-by: Nsneaxiy <sneaxiy@126.com>

* init functional jacobian api

* finish test with dtype float32

* add float64 test case

* polish code

* use atol=1e-5 with dtype float64

* fix for ci

* set timeout for test_jacobian

* polish API docstring

* modify docstring

* Add linalg.solve op, test=develop

* Fix a bug caused by accidental deletion

* updated description and fix a bug: missing a comma

* Add linalg.solve op, test=develop

* updated solve op backward logic

* updated solve op backward logic again

* Add linalg.solve Op, test=develop

* Updated and modified to fit CI requirements

* Fix a bug

* 1)Add more test cases; 2)Fix a wrong usage in reduces operation; 3)Remove redundant code

* Remove redundant comments

* 1)Removed redundant code; 2)Updated to enhance code robustness

* Removed redundant code

* Updated API documents

* 1. add interface for fft;
2. add data type predicate;
3. fix paddle.roll.

* add fft c2c cufft kernel

* implement argument checking & op calling parts for fft_c2c and fftn_c2c

* add operator and opmaker definitions

* only register float and double for cpu.

* add common code for implementing FFT, add pocketfft as a dependency

* add fft c2c cufft kernel function

* fix bugs in python interface

* add support for c2r, r2c operators, op makers, kernels and kernel functors.

* test and fix bugs

* 1. fft_c2c function: add support for onesided=False;
2. add complex<float>, complex<double> support for concat and flip.

* 1. fft: fix python api bugs;
2. shape_op: add support for complex data types.

* fft c2c cufft kernel done with complie and link

* fix shape_op, add mkl placeholder

* remove mkl

* complete fft c2c in gpu

* 1. implement mkl-based fft, FFTC2CFunctor and common function exec_fft;
2. change the design, add input and output typename as template parameter for all FFTFunctors, update pocketfft-based implementation.

* complete fft c2c on gpu in ND

* complete fft c2c on gpu in ND

* complete fft c2c backward in ND

* fix MKL-based implementation

* Add frame op and CPU/GPU kernels.

* Add frame op forward unittest.

* Add frame op forward unittest.

* Remove axis parameter in FrameFunctor.

* Add frame op grad CPU/GPU kernels and unittest.

* Add frame op grad CPU/GPU kernels and unittest.

* Update doc string.

* Update after review and remove librosa requirement in unittest.

* Update grad kernel.

* add fft_c2r op

* Remove data allocation in TransCompute function.

* add fft r2c onesided with cpu(pocketfft/mkl) and gpu

* last fft c2r functor

* fix C2R and R2C for cufft, becase the direction is not an option in these cases.

* add fft r2c onesided with cpu(pocketfft/mkl) and gpu

* fix bugs in python APIs

* fix fft_c2r grad kernal

* fix bugs in python APIs

* add cuda fft c2r grad kernal functor

* clean code

* fix fft_c2r python API

* fill fft r2c result with conjugate symmetry (#19)

fill fft r2c result with conjugate symmetry

* add placeholder for unittests (#24)

* simple parameterize test function by auto generate test case from parm list (#25)

* miscellaneous fixes for python APIs (#26)

* add placeholder for unittests

* resize fft inputs before computation is n or s is provided.

* add complex kernels for pad and pad_grad

* simplify argument checking.

* add type promotion

* add int to float or complex promotion

* fix output data type for static mode

* fix fft's input dtype dispatch, import fft to paddle

* fix typos in axes checking (#27)

* fix typos in axes checking

* fix argument checking (#28)

* fix argument checking

* Add C2R Python layer normal and abnormal use cases (#29)

* documents and single case

* test c2r case

* New C2R Python layer normal and exception use cases

* complete rfft,rfft2,rfftn,ihfft,ihfft2,ihfftn unittest and doc string (#30)

* Documentation of the common interfaces of c2r and c2c (#31)

* Documentation of the common interfaces of c2r and c2c

* clean c++ code  (#32)

* clean code

* Add numpy-based implementation of spectral ops (#33)

* add numpy reference implementation of spectral ops

* Add fft_c2r numpy based implementation for unittest. (#34)

* add fft_c2r numpy implementation

* Add deframe op and stft/istft api. (#23)

* Add frame api

* Add deframe op and kernels.

* Add stft and istft apis.

* Add deframe api. Update stft and istft apis.

* Fix bug in frame_from_librosa function when input dims >= 3

* Rename deframe to overlap_add.

* Update istft.

* Update after code review.

* Add overlap_add op and stft/istft api unittest (#35)

* Add overlap_add op unittest.

* Register complex kernels of squeeze/unsquuze op.

* Add stft/istft api unittest.

* Add unittest for fft helper functions (#36)

* add unittests for fft helper functions. add complex kernel for roll op.

* complete static graph unittest for all public api (#37)

* Unittest of op with FFT C2C, C2R and r2c added (#38)

* documents and single case

* test c2r case

* New C2R Python layer normal and exception use cases

* Documentation of the common interfaces of c2r and c2c

* Unittest of op with FFT C2C, C2R and r2c added
Co-authored-by: lijiaqi <lijiaqi0612@163.com>

* add fft related options to CMakeLists.txt

* fix typos and clean code (#39)

* fix invisible character in mkl branch and fix error in error message

* clean code: remove docstring from unittest for signal.py.

* always convert numpy array to paddle.Tensor to avoid comparing numpy dtype with paddle dtype. (#40)

* always convert numpy array to paddle.Tensor to avoid comparing numpy dtype with paddle dtype.

* fix CI Errors: numpy dtype comparison, thrust when cuda is not available (#41)

1. always convert numpy array to paddle.Tensor to avoid comparing numpy dtype with paddle dtype.
2. promote floating point tensor to complex tensor ior fft_c2c and fft_c2r;
3. fix unittest to catch UnImplementedError and RuntimeError;
4. fix compile error by avoid using thrust when cuda is not available.
5.  fix sample code, use paddle.fft instead of paddle.tensor.fft

* remove inclusion of thrust, add __all__ list for fft (#42)

* Add api doc and update unittest. (#43)

* Add doc strings.
* Update overlap_add op unittest

* fix MKL-based FFT implementation (#44)

* fix MKL-based FFT implementation, MKL CDFT's FORWARD DOMAIN is always REAL for R2C and C2R

* remove code for debug (#45)

* use dynload for cufft (#46)

* use std::ptrdiff_t as datatype of stride (instead of int64_t) to avoid argument mismatch on some platforms.

* add complex support for fill_zeros_like

* use dynload for cufft

* Update doc and unittest. (#47)

* Add doc of frame op and overlap_add op.

* Update unittest.

* use dynload for cufft (#48)

1. use dynload for cufft
2. fix unittest;
3. temporarily disable Rocm.

* fix conflicts and merge upstream (#49)

fix conflicts and merge upstream

* fix compile error: only link dyload_cuda when cuda is available (#50)

* fix compile error: only link dyload_cuda when cuda is available

* fix dynload for cufft on windows (#51)

1. fix dynload for cufft on windows;
2. fix unittests.

* add NOMINMAX to compile on windows (#52)

 add NOMINMAX to compile on windows

* explicitly specify capture mode for lambdas (#55)

 explicitly specify capture mode for lambdas

* fix fft sample (#53)

* fix fft sample

* update scipy and numpy version for unittests of fft (#56)

update scipy and numpy version for unittests of fft

* Add static graph unittests of frame and overlap_add api. (#57)

* Remove cache of cuFFT & Disable ONEMKL (#59)

1. replace numpy.fft with scipy.fft as numpy<1.20 not support ortho norm
2. remove cache of cufft plans;
3. enhance error checking.
4. default WITH_ONEMKL to OFF
Co-authored-by: Njeff41404 <jeff41404@gmail.com>
Co-authored-by: Nroot <root@bjyz-sys-gpu-kongming9.bjyz.baidu.com>
Co-authored-by: NKP <109694228@qq.com>
Co-authored-by: lijiaqi <lijiaqi0612@163.com>
Co-authored-by: NXiaoxu Chen <chenxx_id@163.com>
Co-authored-by: Nlijiaqi0612 <33169170+lijiaqi0612@users.noreply.github.com>

* Add linalg.eigvals API

* pre-commit check

* Adjust code style

* Fix conflict

* Improve code style

* Modify the test code to ignore testing CUDA kernel

* Sort ouput data before checking in test code

* Set timeout value for UT

* Improve API example code to pass CI

* Fix bug for None fetch_list in Windows

* Delete grad Op

* temporally disable the warnings

* disable ut