hdfs.py 18.5 KB
Newer Older
T
tangwei12 已提交
1 2 3 4 5 6 7 8 9 10 11 12 13
#   Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
14
"""HDFS Utils."""
T
tangwei12 已提交
15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86

import os
import sys
import subprocess
import multiprocessing
from datetime import datetime

import re
import copy
import errno

import logging
from paddle.fluid.log_helper import get_logger

__all__ = ["HDFSClient"]

_logger = get_logger(
    __name__, logging.INFO, fmt='%(asctime)s-%(levelname)s: %(message)s')


class HDFSClient(object):
    """
    A tool of HDFS 

    Args:
        hadoop_home (string): hadoop_home 
        configs (dict): hadoop config, it is a dict, please contain \
            key "fs.default.name" and "hadoop.job.ugi"
        Can be a float value
    Examples:
        hadoop_home = "/home/client/hadoop-client/hadoop/"

        configs = {
            "fs.default.name": "hdfs://xxx.hadoop.com:54310",
            "hadoop.job.ugi": "hello,hello123"
        }

        client = HDFSClient(hadoop_home, configs)

        client.ls("/user/com/train-25")
        files = client.lsr("/user/com/train-25/models")
    """

    def __init__(self, hadoop_home, configs):
        self.pre_commands = []
        hadoop_bin = '%s/bin/hadoop' % hadoop_home
        self.pre_commands.append(hadoop_bin)
        dfs = 'fs'
        self.pre_commands.append(dfs)

        for k, v in configs.iteritems():
            config_command = '-D%s=%s' % (k, v)
            self.pre_commands.append(config_command)

    def __run_hdfs_cmd(self, commands, retry_times=5):
        whole_commands = copy.deepcopy(self.pre_commands)
        whole_commands.extend(commands)

        ret_code = 0
        ret_out = None
        ret_err = None
        whole_commands = " ".join(whole_commands)
        for x in range(retry_times + 1):
            proc = subprocess.Popen(
                whole_commands,
                stdout=subprocess.PIPE,
                stderr=subprocess.PIPE,
                shell=True)
            (output, errors) = proc.communicate()
            ret_code, ret_out, ret_err = proc.returncode, output, errors

            _logger.info(
87
                'Times: %d, Running command: %s. Return code: %d, Msg: %s' %
T
tangwei12 已提交
88 89 90 91 92 93 94
                (x, whole_commands, proc.returncode, errors))

            if ret_code == 0:
                break

        return ret_code, ret_out, ret_err

95
    def cat(self, hdfs_path=None):
96 97 98 99 100 101 102
        """
        cat hdfs file
        Args:
            hdfs_path(str): the hdfs file path
        Returns:
            file content
        """
103 104 105 106 107 108 109 110
        if self.is_file(hdfs_path):
            exist_cmd = ['-cat', hdfs_path]
            returncode, output, errors = self.__run_hdfs_cmd(
                exist_cmd, retry_times=1)
            if returncode != 0:
                _logger.error("HDFS cat HDFS path: {} failed".format(hdfs_path))
                return ""
            else:
111
                _logger.info("HDFS cat HDFS path: {} succeed".format(hdfs_path))
112 113 114 115 116
                return output.strip()

        else:
            return ""

T
tangwei12 已提交
117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165
    def is_exist(self, hdfs_path=None):
        """
        whether the remote HDFS path exists

        Args:
            hdfs_path(str): the hdfs file path

        Returns:
            True or False
        """
        exist_cmd = ['-test', '-e', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            exist_cmd, retry_times=1)

        if returncode:
            _logger.error("HDFS is_exist HDFS path: {} failed".format(
                hdfs_path))
            return False
        else:
            _logger.info("HDFS is_exist HDFS path: {} successfully".format(
                hdfs_path))
            return True

    def is_dir(self, hdfs_path=None):
        """
        whether the remote HDFS path is directory

        Args:
            hdfs_path(str): the hdfs file path

        Returns:
            True or False
        """

        if not self.is_exist(hdfs_path):
            return False

        dir_cmd = ['-test', '-d', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(dir_cmd, retry_times=1)

        if returncode:
            _logger.error("HDFS path: {} failed is not a directory".format(
                hdfs_path))
            return False
        else:
            _logger.info("HDFS path: {} successfully is a directory".format(
                hdfs_path))
            return True

166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191
    def is_file(self, hdfs_path=None):
        """
        whether the remote HDFS path is file

        Args:
            hdfs_path(str): the hdfs file path

        Returns:
            True or False
        """

        if not self.is_exist(hdfs_path):
            return False

        dir_cmd = ['-test', '-d', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(dir_cmd, retry_times=1)

        if returncode == 0:
            _logger.error("HDFS path: {} failed is not a file".format(
                hdfs_path))
            return False
        else:
            _logger.info("HDFS path: {} successfully is a file".format(
                hdfs_path))
            return True

T
tangwei12 已提交
192 193 194 195 196 197 198
    def delete(self, hdfs_path):
        """
        Remove a file or directory from HDFS.

        whether the remote HDFS path exists

        Args:
199
            hdfs_path(str): HDFS path.
T
tangwei12 已提交
200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232

        Returns:
            True or False
            This function returns `True` if the deletion was successful and `False` if
            no file or directory previously existed at `hdfs_path`.
        """
        _logger.info('Deleting %r.', hdfs_path)

        if not self.is_exist(hdfs_path):
            _logger.warn("HDFS path: {} do not exist".format(hdfs_path))
            return True

        if self.is_dir(hdfs_path):
            del_cmd = ['-rmr', hdfs_path]
        else:
            del_cmd = ['-rm', hdfs_path]

        returncode, output, errors = self.__run_hdfs_cmd(del_cmd, retry_times=0)

        if returncode:
            _logger.error("HDFS path: {} delete files failure".format(
                hdfs_path))
            return False
        else:
            _logger.info("HDFS path: {} delete files successfully".format(
                hdfs_path))
            return True

    def rename(self, hdfs_src_path, hdfs_dst_path, overwrite=False):
        """
        Move a file or folder on HDFS.

        Args:
233 234 235 236
            hdfs_src_path(str): HDFS path
            hdfs_dst_path(str): HDFS path
            overwrite(bool|False): If the path already exists and overwrite is
                                   False, will return False.
T
tangwei12 已提交
237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265
        Returns:
            True or False
        """
        assert hdfs_src_path is not None
        assert hdfs_dst_path is not None

        if not self.is_exist(hdfs_src_path):
            _logger.info("HDFS path do not exist: {}".format(hdfs_src_path))
        if self.is_exist(hdfs_dst_path) and not overwrite:
            _logger.error("HDFS path is exist: {} and overwrite=False".format(
                hdfs_dst_path))

        rename_command = ['-mv', hdfs_src_path, hdfs_dst_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            rename_command, retry_times=1)

        if returncode:
            _logger.error("HDFS rename path: {} to {} failed".format(
                hdfs_src_path, hdfs_dst_path))
            return False
        else:
            _logger.info("HDFS rename path: {} to {} successfully".format(
                hdfs_src_path, hdfs_dst_path))
            return True

    @staticmethod
    def make_local_dirs(local_path):
        """
        create a directiory local, is same to mkdir
266

T
tangwei12 已提交
267
        Args:
268
            local_path(str): local path that wants to create a directiory.
T
tangwei12 已提交
269 270 271 272 273 274 275 276 277 278 279 280
        """
        try:
            os.makedirs(local_path)
        except OSError as e:
            if e.errno != errno.EEXIST:
                raise

    def makedirs(self, hdfs_path):
        """
        Create a remote directory, recursively if necessary.

        Args:
281 282
            hdfs_path(str): Remote path. Intermediate directories will be
                            created appropriately.
T
tangwei12 已提交
283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301

        Returns:
            True or False
        """
        _logger.info('Creating directories to %r.', hdfs_path)
        assert hdfs_path is not None

        if self.is_exist(hdfs_path):
            _logger.error("HDFS path is exist: {}".format(hdfs_path))
            return

        mkdirs_commands = ['-mkdir', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            mkdirs_commands, retry_times=1)

        if returncode:
            _logger.error("HDFS mkdir path: {} failed".format(hdfs_path))
            return False
        else:
302
            _logger.info("HDFS mkdir path: {} successfully".format(hdfs_path))
T
tangwei12 已提交
303 304 305 306 307 308 309
            return True

    def ls(self, hdfs_path):
        """
        ls directory contents about HDFS hdfs_path

        Args:
310
            hdfs_path(str): Remote HDFS path will be ls.
T
tangwei12 已提交
311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343

        Returns:
            List: a contents list about hdfs_path.
        """
        assert hdfs_path is not None

        if not self.is_exist(hdfs_path):
            return []

        ls_commands = ['-ls', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            ls_commands, retry_times=1)

        if returncode:
            _logger.error("HDFS list path: {} failed".format(hdfs_path))
            return []
        else:
            _logger.info("HDFS list path: {} successfully".format(hdfs_path))

            ret_lines = []
            regex = re.compile('\s+')
            out_lines = output.strip().split("\n")
            for line in out_lines:
                re_line = regex.split(line)
                if len(re_line) == 8:
                    ret_lines.append(re_line[7])
            return ret_lines

    def lsr(self, hdfs_path, excludes=[]):
        """
        list directory contents about HDFS hdfs_path recursively

        Args:
344 345
            hdfs_path(str): Remote HDFS path.
            excludes(list): excludes
T
tangwei12 已提交
346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383

        Returns:
            List: a contents list about hdfs_path.
        """

        assert hdfs_path is not None

        if not self.is_exist(hdfs_path):
            return []

        ls_commands = ['-lsr', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            ls_commands, retry_times=1)

        if returncode:
            _logger.error("HDFS list all files: {} failed".format(hdfs_path))
            return []
        else:
            _logger.info("HDFS list all files: {} successfully".format(
                hdfs_path))
            lines = []
            regex = re.compile('\s+')
            out_lines = output.strip().split("\n")
            for line_id, line in enumerate(out_lines):
                re_line = regex.split(line)
                if len(re_line) == 8:
                    if re_line[0][0] == "d":
                        continue
                    if re_line[7] in excludes:
                        continue
                    else:
                        lines.append((re_line[7], re_line[5] + " " + re_line[6],
                                      line_id))
            lines = sorted(lines, key=lambda line: line[2])
            ret_lines = [ret[0] for ret in lines]
            return ret_lines

    @staticmethod
384 385 386 387 388 389 390 391 392 393 394 395
    def split_files(files, trainer_id, trainers):
        """
        split file list

        Args:
            files(list): file list
            trainer_id(int): trainer mpi rank id
            trainers(int): all trainers num

        Returns:
            fileist(list): file list of current trainer
        """
T
tangwei12 已提交
396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423
        remainder = len(files) % trainers
        blocksize = len(files) / trainers

        blocks = [blocksize] * trainers
        for i in range(remainder):
            blocks[i] += 1

        trainer_files = [[]] * trainers
        begin = 0
        for i in range(trainers):
            trainer_files[i] = files[begin:begin + blocks[i]]
            begin += blocks[i]

        return trainer_files[trainer_id]

    def download(self,
                 hdfs_path,
                 local_path,
                 multi_processes=5,
                 overwrite=False,
                 retry_times=5):
        """
        Download files from HDFS using multi process.

        Args:
            hdfs_path(str): path on hdfs
            local_path(str): path on local
            multi_processes(int|5): the download data process at the same time, default=5
424 425
            overwrite(bool): is overwrite
            retry_times(int): retry times
T
tangwei12 已提交
426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501

        Returns:
            List:
            Download files in local folder.
        """

        def __subprocess_download(local_path, datas):
            """
            download file from HDFS

            Args:
                hdfs_path(str): the hdfs file path
                local_path(str): the local file path
                overwrite(bool|None): will overwrite the file on HDFS or not
                retry_times(int|5): retry times

            Returns:
                True or False
            """
            for data in datas:
                download_commands = ["-get", data, local_path]

                returncode, output, errors = self.__run_hdfs_cmd(
                    download_commands, retry_times=retry_times)

                if returncode:
                    _logger.error(
                        "Get local path: {} from HDFS path: {} failed".format(
                            local_path, hdfs_path))
                    return False
            return True

        self.make_local_dirs(local_path)

        all_files = client.ls(hdfs_path)

        procs = []
        for i in range(multi_processes):
            process_datas = HDFSClient.split_flies(all_files, i,
                                                   multi_processes)
            p = multiprocessing.Process(
                target=__subprocess_download,
                args=(
                    local_path,
                    process_datas, ))
            procs.append(p)
            p.start()

        # complete the processes
        for proc in procs:
            proc.join()

        _logger.info("Finish {} multi process to download datas".format(
            multi_processes))

        local_downloads = []
        for dirname, folder, files in os.walk(local_path):
            for i in files:
                t = os.path.join(dirname, i)
                local_downloads.append(t)
        return local_downloads

    def upload(self,
               hdfs_path,
               local_path,
               multi_processes=5,
               overwrite=False,
               retry_times=5):
        """
        Upload files to HDFS using multi process.

        Args:
            hdfs_path(str): path on hdfs
            local_path(str): path on local
            multi_processes(int|5): the upload data process at the same time, default=5
            overwrite(bool|False): will overwrite file on HDFS or not
502
            retry_times(int): upload file max retry time.
T
tangwei12 已提交
503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520

        Returns:
            None
        """

        def __subprocess_upload(hdfs_path_single, datas):
            for data in datas:
                put_commands = ["-put", data, hdfs_path_single]
                returncode, output, errors = self.__run_hdfs_cmd(put_commands,
                                                                 retry_times)

                if returncode:
                    _logger.error("Put local path: {} to HDFS path: {} failed".
                                  format(data, hdfs_path_single))
                    return False
            return True

        def get_local_files(path):
521 522 523 524 525 526 527 528 529
            """
            get local files

            Args:
                path(str): local path

            Returns:
                list of local files
            """
T
tangwei12 已提交
530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569
            rlist = []

            if not os.path.exists(path):
                return rlist

            if os.path.isdir(path):
                for file in os.listdir(path):
                    t = os.path.join(path, file)
                    rlist.append(t)
            else:
                rlist.append(path)
            return rlist

        all_files = get_local_files(local_path)
        if not all_files:
            _logger.info("there are nothing need to upload, exit")
            return

        if self.is_exist(hdfs_path) and overwrite:
            self.delete(hdfs_path)
            self.makedirs(hdfs_path)

        procs = []
        for i in range(multi_processes):
            process_datas = HDFSClient.split_flies(all_files, i,
                                                   multi_processes)
            p = multiprocessing.Process(
                target=__subprocess_upload, args=(
                    hdfs_path,
                    process_datas, ))
            procs.append(p)
            p.start()

        # complete the processes
        for proc in procs:
            proc.join()

        _logger.info("Finish upload datas from {} to {}".format(local_path,
                                                                hdfs_path))

570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595
    def upload_dir(self, dest_dir, local_dir, overwrite=False):
        """
        upload dir to hdfs
        Args:
            dest_dir(str): hdfs dest dir
            local_dir(str): hdfs local dir
            overwrite(bool): is overwrite
        Returns:
            return code
        """
        local_dir = local_dir.rstrip("/")
        dest_dir = dest_dir.rstrip("/")
        local_basename = os.path.basename(local_dir)
        if self.is_exist(dest_dir + "/" + local_basename) and overwrite:
            self.delete(dest_dir + "/" + local_basename)
        if not self.is_exist(dest_dir):
            self.makedirs(dest_dir)
        put_command = ["-put", local_dir, dest_dir]
        returncode, output, errors = self.__run_hdfs_cmd(put_command,
                                                         retry_times)
        if returncode != 0:
            _logger.error("Put local dir: {} to HDFS dir: {} failed".format(
                local_dir, dest_dir))
            return False
        return True

T
tangwei12 已提交
596 597 598 599 600 601 602 603 604 605 606 607 608

if __name__ == "__main__":
    hadoop_home = "/home/client/hadoop-client/hadoop/"

    configs = {
        "fs.default.name": "hdfs://xxx.hadoop.com:54310",
        "hadoop.job.ugi": "hello,hello123"
    }

    client = HDFSClient(hadoop_home, configs)

    client.ls("/user/com/train-25")
    files = client.lsr("/user/com/train-25/models")