diff --git a/src/vs/workbench/contrib/scm/browser/activity.ts b/src/vs/workbench/contrib/scm/browser/activity.ts
index 17781472621a6f17300dcd0ce98cd5d76666342b..6de2a1021748fc85e94af3cafa2a66f6d38eadc2 100644
--- a/src/vs/workbench/contrib/scm/browser/activity.ts
+++ b/src/vs/workbench/contrib/scm/browser/activity.ts
@@ -4,7 +4,7 @@
  *--------------------------------------------------------------------------------------------*/
 
 import { localize } from 'vs/nls';
-import { basename, relativePath } from 'vs/base/common/resources';
+import { basename } from 'vs/base/common/resources';
 import { IDisposable, dispose, Disposable, DisposableStore, combinedDisposable, MutableDisposable } from 'vs/base/common/lifecycle';
 import { Event } from 'vs/base/common/event';
 import { VIEW_PANE_ID, ISCMService, ISCMRepository } from 'vs/workbench/contrib/scm/common/scm';
@@ -15,6 +15,7 @@ import { IStatusbarService, StatusbarAlignment as MainThreadStatusBarAlignment }
 import { IEditorService } from 'vs/workbench/services/editor/common/editorService';
 import { IConfigurationService } from 'vs/platform/configuration/common/configuration';
 import { EditorResourceAccessor } from 'vs/workbench/common/editor';
+import { IUriIdentityService } from 'vs/workbench/services/uriIdentity/common/uriIdentity';
 
 function getCount(repository: ISCMRepository): number {
 	if (typeof repository.provider.count === 'number') {
@@ -39,7 +40,8 @@ export class SCMStatusController implements IWorkbenchContribution {
 		@IContextKeyService readonly contextKeyService: IContextKeyService,
 		@IActivityService private readonly activityService: IActivityService,
 		@IEditorService private readonly editorService: IEditorService,
-		@IConfigurationService private readonly configurationService: IConfigurationService
+		@IConfigurationService private readonly configurationService: IConfigurationService,
+		@IUriIdentityService private readonly uriIdentityService: IUriIdentityService
 	) {
 		this.focusedProviderContextKey = contextKeyService.createKey<string | undefined>('scmProvider', undefined);
 		this.scmService.onDidAddRepository(this.onDidAddRepository, this, this.disposables);
@@ -73,7 +75,7 @@ export class SCMStatusController implements IWorkbenchContribution {
 				continue;
 			}
 
-			const path = relativePath(root, resource);
+			const path = this.uriIdentityService.extUri.relativePath(root, resource);
 
 			if (path && !/^\.\./.test(path) && path.length < bestMatchLength) {
 				bestRepository = repository;
diff --git a/src/vs/workbench/contrib/scm/browser/scmViewPane.ts b/src/vs/workbench/contrib/scm/browser/scmViewPane.ts
index 0918ece61470073a5516011dd1c1df73004c2818..d89a50e6e06af62be9a07f77b13cce6b9bbe7f4d 100644
--- a/src/vs/workbench/contrib/scm/browser/scmViewPane.ts
+++ b/src/vs/workbench/contrib/scm/browser/scmViewPane.ts
@@ -5,7 +5,7 @@
 
 import 'vs/css!./media/scm';
 import { Event, Emitter } from 'vs/base/common/event';
-import { basename, dirname, isEqual } from 'vs/base/common/resources';
+import { basename, dirname } from 'vs/base/common/resources';
 import { IDisposable, Disposable, DisposableStore, combinedDisposable, dispose, toDisposable } from 'vs/base/common/lifecycle';
 import { ViewPane, IViewPaneOptions } from 'vs/workbench/browser/parts/views/viewPaneContainer';
 import { append, $, Dimension } from 'vs/base/browser/dom';
@@ -76,6 +76,7 @@ import { AnchorAlignment } from 'vs/base/browser/ui/contextview/contextview';
 import { RepositoryRenderer } from 'vs/workbench/contrib/scm/browser/scmRepositoryRenderer';
 import { IPosition } from 'vs/editor/common/core/position';
 import { ColorScheme } from 'vs/platform/theme/common/theme';
+import { IUriIdentityService } from 'vs/workbench/services/uriIdentity/common/uriIdentity';
 
 type TreeElement = ISCMRepository | ISCMInput | ISCMResourceGroup | IResourceNode<ISCMResource, ISCMResourceGroup> | ISCMResource;
 
@@ -772,7 +773,8 @@ class ViewModel {
 		@IInstantiationService protected instantiationService: IInstantiationService,
 		@IEditorService protected editorService: IEditorService,
 		@IConfigurationService protected configurationService: IConfigurationService,
-		@ISCMViewService private scmViewService: ISCMViewService
+		@ISCMViewService private scmViewService: ISCMViewService,
+		@IUriIdentityService private uriIdentityService: IUriIdentityService
 	) {
 		this.onDidChangeRepositoryCollapseState = Event.any(
 			this._onDidChangeRepositoryCollapseState.event,
@@ -972,8 +974,8 @@ class ViewModel {
 			for (let j = item.groupItems.length - 1; j >= 0; j--) {
 				const groupItem = item.groupItems[j];
 				const resource = this.mode === ViewModelMode.Tree
-					? groupItem.tree.getNode(uri)?.element
-					: groupItem.resources.find(r => isEqual(r.sourceUri, uri));
+					? groupItem.tree.getNode(uri)?.element // TODO@Joao URI identity?
+					: groupItem.resources.find(r => this.uriIdentityService.extUri.isEqual(r.sourceUri, uri));
 
 				if (resource) {
 					this.tree.reveal(resource);