diff --git a/adversarial/README.md b/adversarial/README.md new file mode 100644 index 0000000000000000000000000000000000000000..51da21918a9d6e2192a2e03eabef4fde97896bc5 --- /dev/null +++ b/adversarial/README.md @@ -0,0 +1,9 @@ +# Advbox + +Advbox is a Python toolbox to create adversarial examples that fool neural networks. It requires Python and paddle. + +## How to use + +1. train a model and save it's parameters. (like fluid_mnist.py) +2. load the parameters which is trained in step1, then reconstruct the model.(like mnist_tutorial_fgsm.py) +3. use advbox to generate the adversarial sample. diff --git a/adversarial/advbox/__init__.py b/adversarial/advbox/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..f56f14f18dafdfe1e712cea178a63f09a087b587 --- /dev/null +++ b/adversarial/advbox/__init__.py @@ -0,0 +1,16 @@ +# Copyright (c) 2017 PaddlePaddle Authors. All Rights Reserved +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +""" + A set of tools for generating adversarial example on paddle platform +""" diff --git a/adversarial/advbox/attacks/base.py b/adversarial/advbox/attacks/base.py new file mode 100644 index 0000000000000000000000000000000000000000..98a65f2fddff999ac6fa98a5733128a63a60f916 --- /dev/null +++ b/adversarial/advbox/attacks/base.py @@ -0,0 +1,39 @@ +""" +The base model of the model. +""" +from abc import ABCMeta, abstractmethod + + +class Attack(object): + """ + Abstract base class for adversarial attacks. `Attack` represent an adversarial attack + which search an adversarial example. subclass should implement the _apply() method. + + Args: + model(Model): an instance of the class advbox.base.Model. + + """ + __metaclass__ = ABCMeta + + def __init__(self, model): + self.model = model + + def __call__(self, image_label): + """ + Generate the adversarial sample. + + Args: + image_label(list): The image and label tuple list with one element. + """ + adv_img = self._apply(image_label) + return adv_img + + @abstractmethod + def _apply(self, image_label): + """ + Search an adversarial example. + + Args: + image_batch(list): The image and label tuple list with one element. + """ + raise NotImplementedError diff --git a/adversarial/advbox/attacks/gradientsign.py b/adversarial/advbox/attacks/gradientsign.py new file mode 100644 index 0000000000000000000000000000000000000000..15b1d176cb11330ac290d73aec1419a3d8f3cc4c --- /dev/null +++ b/adversarial/advbox/attacks/gradientsign.py @@ -0,0 +1,38 @@ +""" +This module provide the attack method for FGSM's implement. +""" +from __future__ import division +import numpy as np +from collections import Iterable +from .base import Attack + + +class GradientSignAttack(Attack): + """ + This attack was originally implemented by Goodfellow et al. (2015) with the + infinity norm (and is known as the "Fast Gradient Sign Method"). This is therefore called + the Fast Gradient Method. + Paper link: https://arxiv.org/abs/1412.6572 + """ + + def _apply(self, image_label, epsilons=1000): + assert len(image_label) == 1 + pre_label = np.argmax(self.model.predict(image_label)) + + min_, max_ = self.model.bounds() + gradient = self.model.gradient(image_label) + gradient_sign = np.sign(gradient) * (max_ - min_) + + if not isinstance(epsilons, Iterable): + epsilons = np.linspace(0, 1, num=epsilons + 1) + + for epsilon in epsilons: + adv_img = image_label[0][0].reshape( + gradient_sign.shape) + epsilon * gradient_sign + adv_img = np.clip(adv_img, min_, max_) + adv_label = np.argmax(self.model.predict([(adv_img, 0)])) + if pre_label != adv_label: + return adv_img + + +FGSM = GradientSignAttack diff --git a/adversarial/advbox/models/__init__.py b/adversarial/advbox/models/__init__.py new file mode 100644 index 0000000000000000000000000000000000000000..eee0f6efd4774b42fcd082eb06d1398d2ee51bc4 --- /dev/null +++ b/adversarial/advbox/models/__init__.py @@ -0,0 +1,16 @@ +# Copyright (c) 2017 PaddlePaddle Authors. All Rights Reserved +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +""" +Paddle model for target of attack +""" diff --git a/adversarial/advbox/models/base.py b/adversarial/advbox/models/base.py new file mode 100644 index 0000000000000000000000000000000000000000..74e1045def7648b4a8df30e89312d73c0d4fe7e1 --- /dev/null +++ b/adversarial/advbox/models/base.py @@ -0,0 +1,90 @@ +""" +The base model of the model. +""" +from abc import ABCMeta +import abc + +abstractmethod = abc.abstractmethod + + +class Model(object): + """ + Base class of model to provide attack. + + + Args: + bounds(tuple): The lower and upper bound for the image pixel. + channel_axis(int): The index of the axis that represents the color channel. + preprocess(tuple): Two element tuple used to preprocess the input. First + substract the first element, then divide the second element. + """ + __metaclass__ = ABCMeta + + def __init__(self, bounds, channel_axis, preprocess=None): + assert len(bounds) == 2 + assert channel_axis in [0, 1, 2, 3] + + if preprocess is None: + preprocess = (0, 1) + self._bounds = bounds + self._channel_axis = channel_axis + self._preprocess = preprocess + + def bounds(self): + """ + Return the upper and lower bounds of the model. + """ + return self._bounds + + def channel_axis(self): + """ + Return the channel axis of the model. + """ + return self._channel_axis + + def _process_input(self, input_): + res = input_ + sub, div = self._preprocess + if sub != 0: + res = input_ - sub + assert div != 0 + if div != 1: + res /= div + return res + + @abstractmethod + def predict(self, image_batch): + """ + Calculate the prediction of the image batch. + + Args: + image_batch(numpy.ndarray): image batch of shape (batch_size, height, width, channels). + + Return: + numpy.ndarray: predictions of the images with shape (batch_size, num_of_classes). + """ + raise NotImplementedError + + @abstractmethod + def num_classes(self): + """ + Determine the number of the classes + + Return: + int: the number of the classes + """ + raise NotImplementedError + + @abstractmethod + def gradient(self, image_batch): + """ + Calculate the gradient of the cross-entropy loss w.r.t the image. + + Args: + image_batch(list): The image and label tuple list. + + Return: + numpy.ndarray: gradient of the cross-entropy loss w.r.t the image with + the shape (height, width, channel). + """ + raise NotImplementedError diff --git a/adversarial/advbox/models/paddle.py b/adversarial/advbox/models/paddle.py new file mode 100644 index 0000000000000000000000000000000000000000..33b2a3d5c6973470fb25c98872cd53b3ff11bab4 --- /dev/null +++ b/adversarial/advbox/models/paddle.py @@ -0,0 +1,101 @@ +from __future__ import absolute_import + +import numpy as np +import paddle.v2 as paddle +import paddle.v2.fluid as fluid +from paddle.v2.fluid.framework import program_guard + +from .base import Model + + +class PaddleModel(Model): + """ + Create a PaddleModel instance. + When you need to generate a adversarial sample, you should construct an instance of PaddleModel. + + Args: + program(paddle.v2.fluid.framework.Program): The program of the model which generate the adversarial sample. + input_name(string): The name of the input. + logits_name(string): The name of the logits. + predict_name(string): The name of the predict. + cost_name(string): The name of the loss in the program. + """ + + def __init__(self, + program, + input_name, + logits_name, + predict_name, + cost_name, + bounds, + channel_axis=3, + preprocess=None): + super(PaddleModel, self).__init__( + bounds=bounds, channel_axis=channel_axis, preprocess=preprocess) + + if preprocess is None: + preprocess = (0, 1) + + self._program = program + self._place = fluid.CPUPlace() + self._exe = fluid.Executor(self._place) + + self._input_name = input_name + self._logits_name = logits_name + self._predict_name = predict_name + self._cost_name = cost_name + + # gradient + loss = self._program.block(0).var(self._cost_name) + param_grads = fluid.backward.append_backward( + loss, parameter_list=[self._input_name]) + self._gradient = dict(param_grads)[self._input_name] + + def predict(self, image_batch): + """ + Predict the label of the image_batch. + + Args: + image_batch(list): The image and label tuple list. + Return: + numpy.ndarray: predictions of the images with shape (batch_size, num_of_classes). + """ + feeder = fluid.DataFeeder( + feed_list=[self._input_name, self._logits_name], + place=self._place, + program=self._program) + predict_var = self._program.block(0).var(self._predict_name) + predict = self._exe.run(self._program, + feed=feeder.feed(image_batch), + fetch_list=[predict_var]) + return predict + + def num_classes(self): + """ + Calculate the number of classes of the output label. + + Return: + int: the number of classes + """ + predict_var = self._program.block(0).var(self._predict_name) + assert len(predict_var.shape) == 2 + return predict_var.shape[1] + + def gradient(self, image_batch): + """ + Calculate the gradient of the loss w.r.t the input. + + Args: + image_batch(list): The image and label tuple list. + Return: + list: The list of the gradient of the image. + """ + feeder = fluid.DataFeeder( + feed_list=[self._input_name, self._logits_name], + place=self._place, + program=self._program) + + grad, = self._exe.run(self._program, + feed=feeder.feed(image_batch), + fetch_list=[self._gradient]) + return grad diff --git a/adversarial/fluid_mnist.py b/adversarial/fluid_mnist.py new file mode 100644 index 0000000000000000000000000000000000000000..db4d4b51868ffa8be13d4d57a40e1def7e25d1a8 --- /dev/null +++ b/adversarial/fluid_mnist.py @@ -0,0 +1,86 @@ +""" +CNN on mnist data using fluid api of paddlepaddle +""" +import paddle.v2 as paddle +import paddle.v2.fluid as fluid + + +def mnist_cnn_model(img): + """ + Mnist cnn model + + Args: + img(Varaible): the input image to be recognized + + Returns: + Variable: the label prediction + """ + conv_pool_1 = fluid.nets.simple_img_conv_pool( + input=img, + num_filters=20, + filter_size=5, + pool_size=2, + pool_stride=2, + act='relu') + + conv_pool_2 = fluid.nets.simple_img_conv_pool( + input=conv_pool_1, + num_filters=50, + filter_size=5, + pool_size=2, + pool_stride=2, + act='relu') + + logits = fluid.layers.fc(input=conv_pool_2, size=10, act='softmax') + return logits + + +def main(): + """ + Train the cnn model on mnist datasets + """ + img = fluid.layers.data(name='img', shape=[1, 28, 28], dtype='float32') + label = fluid.layers.data(name='label', shape=[1], dtype='int64') + logits = mnist_cnn_model(img) + cost = fluid.layers.cross_entropy(input=logits, label=label) + avg_cost = fluid.layers.mean(x=cost) + optimizer = fluid.optimizer.Adam(learning_rate=0.01) + optimizer.minimize(avg_cost) + + accuracy = fluid.evaluator.Accuracy(input=logits, label=label) + + BATCH_SIZE = 50 + PASS_NUM = 3 + ACC_THRESHOLD = 0.98 + LOSS_THRESHOLD = 10.0 + train_reader = paddle.batch( + paddle.reader.shuffle( + paddle.dataset.mnist.train(), buf_size=500), + batch_size=BATCH_SIZE) + + place = fluid.CPUPlace() + exe = fluid.Executor(place) + feeder = fluid.DataFeeder(feed_list=[img, label], place=place) + exe.run(fluid.default_startup_program()) + + for pass_id in range(PASS_NUM): + accuracy.reset(exe) + for data in train_reader(): + loss, acc = exe.run(fluid.default_main_program(), + feed=feeder.feed(data), + fetch_list=[avg_cost] + accuracy.metrics) + pass_acc = accuracy.eval(exe) + print("pass_id=" + str(pass_id) + " acc=" + str(acc) + " pass_acc=" + + str(pass_acc)) + if loss < LOSS_THRESHOLD and pass_acc > ACC_THRESHOLD: + break + + pass_acc = accuracy.eval(exe) + print("pass_id=" + str(pass_id) + " pass_acc=" + str(pass_acc)) + fluid.io.save_params( + exe, dirname='./mnist', main_program=fluid.default_main_program()) + print('train mnist done') + + +if __name__ == '__main__': + main() diff --git a/adversarial/mnist_tutorial_fgsm.py b/adversarial/mnist_tutorial_fgsm.py new file mode 100644 index 0000000000000000000000000000000000000000..8b29346b8cd7f643771640afc4f783f7544cd071 --- /dev/null +++ b/adversarial/mnist_tutorial_fgsm.py @@ -0,0 +1,87 @@ +""" +FGSM demos on mnist using advbox tool. +""" +import paddle.v2 as paddle +import paddle.v2.fluid as fluid +import matplotlib.pyplot as plt +import numpy as np + +from advbox.models.paddle import PaddleModel +from advbox.attacks.gradientsign import GradientSignAttack + + +def cnn_model(img): + """ + Mnist cnn model + Args: + img(Varaible): the input image to be recognized + Returns: + Variable: the label prediction + """ + #conv1 = fluid.nets.conv2d() + conv_pool_1 = fluid.nets.simple_img_conv_pool( + input=img, + num_filters=20, + filter_size=5, + pool_size=2, + pool_stride=2, + act='relu') + + conv_pool_2 = fluid.nets.simple_img_conv_pool( + input=conv_pool_1, + num_filters=50, + filter_size=5, + pool_size=2, + pool_stride=2, + act='relu') + + logits = fluid.layers.fc(input=conv_pool_2, size=10, act='softmax') + return logits + + +def main(): + """ + Advbox demo which demonstrate how to use advbox. + """ + IMG_NAME = 'img' + LABEL_NAME = 'label' + + img = fluid.layers.data(name=IMG_NAME, shape=[1, 28, 28], dtype='float32') + # gradient should flow + img.stop_gradient = False + label = fluid.layers.data(name=LABEL_NAME, shape=[1], dtype='int64') + logits = cnn_model(img) + cost = fluid.layers.cross_entropy(input=logits, label=label) + avg_cost = fluid.layers.mean(x=cost) + + place = fluid.CPUPlace() + exe = fluid.Executor(place) + + BATCH_SIZE = 1 + train_reader = paddle.batch( + paddle.reader.shuffle( + paddle.dataset.mnist.train(), buf_size=500), + batch_size=BATCH_SIZE) + feeder = fluid.DataFeeder( + feed_list=[IMG_NAME, LABEL_NAME], + place=place, + program=fluid.default_main_program()) + + fluid.io.load_params( + exe, "./mnist/", main_program=fluid.default_main_program()) + + # advbox demo + m = PaddleModel(fluid.default_main_program(), IMG_NAME, LABEL_NAME, + logits.name, avg_cost.name, (-1, 1)) + att = GradientSignAttack(m) + for data in train_reader(): + # fgsm attack + adv_img = att(data) + plt.imshow(n[0][0], cmap='Greys_r') + plt.show() + #np.save('adv_img', adv_img) + break + + +if __name__ == '__main__': + main() diff --git a/benchmark/cluster/README.md b/benchmark/cluster/README.md new file mode 100644 index 0000000000000000000000000000000000000000..b619613ea7a5b6e940ec735314e8e47338b2c600 --- /dev/null +++ b/benchmark/cluster/README.md @@ -0,0 +1,78 @@ +# Cluster Training Benchmark + +## Setup + +- Platform + - Kubernetes: v1.6.2 + - Linux Kernel: v3.10.0 + +- Resource + - CPU: 10 Cores per Pod + - Memory: 5GB per Pod + +- Docker Image + + We use different base Docker Image to run the benchmark on Kubernetes: + - PaddlePaddle v2: paddlepaddle/paddle:0.11.0 + - PaddlePaddle Fluid: paddlepaddle/paddle:[commit-id] + - TensorFlow: tensorflow/tensorflow:1.5.0-rc0 + +- Model + vgg16 is used in this benchmark. + +## Cases + +- Variable + - Batch Size of training data. + - PServer count of the training job. + - The number of trainers. + +- Invariant + - The resource of trainer/pserver Pod. + +### Measure the Performance for Different Batch Size + +- PServer Count: 40 +- Trainer Count: 100 +- Metrics: mini-batch / sec + +| Batch Size | 32 | 64 | 128 | 256 | +| -- | -- | -- | -- | -- | +| PaddlePaddle Fluid | - | - | - | - | +| PaddlePaddle v2 | - | - | - | - | +| TensorFlow | - | - | - | - | + +### Measure the Performance for Different PServer Count + +- Trainer Count: 100 +- Batch Size: 64 +- Metrics: mini-batch / sec + +| PServer Count | 10 | 20 | 40 | 60 | +| -- | -- | -- | -- | -- | +| PaddlePaddle Fluid | - | - | - | - | +| PaddlePaddle v2 | - | - | - | - | +| TensorFlow | - | - | - | - | + +### Measure Parallel Efficiency By Increasing Trainer Count + +- PServer Count: 20 +- Batch Size: 64 +- Metrics: + +$S = \div(T1, TN)$ + +which S is the ratio of T1 over TN, training time of 1 and N trainers. +The parallel efficiency is: + +$E = \div(S, N)$ + +| Trainer Counter | 1 | 10 | 20 | 30 | 40 | 50 | 60 | 70 | 80 | 90 | 100 | +| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | +| PaddlePaddle Fluid | - | - | - | - | - | - | - | - | - | - | - | +| PaddlePaddle v2 | - | - | - | - | - | - | - | - | - | - | - | - | +| TensorFlow | - | - | - | - | - | - | - | - | - | - | - | - | - | + +## Reproduce the benchmark + +TODO diff --git a/doc/api/v2/fluid.rst b/doc/api/v2/fluid.rst index 43fc19dc492bbc119f2356034b81c65e443db2fa..5f15cad2b530dfb3702357b3c26885ac2a7b7beb 100644 --- a/doc/api/v2/fluid.rst +++ b/doc/api/v2/fluid.rst @@ -15,4 +15,4 @@ Fluid fluid/param_attr.rst fluid/profiler.rst fluid/regularizer.rst - + fluid/io.rst diff --git a/doc/api/v2/fluid/io.rst b/doc/api/v2/fluid/io.rst new file mode 100644 index 0000000000000000000000000000000000000000..67f68c4e9e16b379207b8de114cdf769e056f78e --- /dev/null +++ b/doc/api/v2/fluid/io.rst @@ -0,0 +1,10 @@ +=========== +IO +=========== + + + +is_parameter +----------- +.. autofunction:: paddle.v2.fluid.io.is_parameter + :noindex: diff --git a/doc/api/v2/fluid/layers.rst b/doc/api/v2/fluid/layers.rst index a7c8670f66cc7f319e41155211ead2d89126117f..24bdf08fffd176a799fd12680f4651bb4bd0c9a9 100644 --- a/doc/api/v2/fluid/layers.rst +++ b/doc/api/v2/fluid/layers.rst @@ -38,6 +38,16 @@ elementwise_add .. autofunction:: paddle.v2.fluid.layers.elementwise_add :noindex: +elementwise_sub +--------------- +.. autofunction:: paddle.v2.fluid.layers.elementwise_sub + :noindex: + +elementwise_mul +--------------- +.. autofunction:: paddle.v2.fluid.layers.elementwise_mul + :noindex: + elementwise_div --------------- .. autofunction:: paddle.v2.fluid.layers.elementwise_div @@ -348,3 +358,132 @@ reduce_min .. autofunction:: paddle.v2.fluid.layers.reduce_min :noindex: +logsigmoid +---------- +.. autofunction:: paddle.v2.fluid.layers.logsigmoid + :noindex: + +exp +--- +.. autofunction:: paddle.v2.fluid.layers.exp + :noindex: + +relu +---- +.. autofunction:: paddle.v2.fluid.layers.relu + :noindex: + +tanh +---- +.. autofunction:: paddle.v2.fluid.layers.tanh + :noindex: + +tanh_shrink +----------- +.. autofunction:: paddle.v2.fluid.layers.tanh_shrink + :noindex: + +softshrink +---------- +.. autofunction:: paddle.v2.fluid.layers.softshrink + :noindex: + +sqrt +---- +.. autofunction:: paddle.v2.fluid.layers.sqrt + :noindex: + +abs +---- +.. autofunction:: paddle.v2.fluid.layers.abs + :noindex: + +ceil +---- +.. autofunction:: paddle.v2.fluid.layers.ceil + :noindex: + +floor +----- +.. autofunction:: paddle.v2.fluid.layers.floor + :noindex: + +round +----- +.. autofunction:: paddle.v2.fluid.layers.round + :noindex: + +reciprocal +---------- +.. autofunction:: paddle.v2.fluid.layers.reciprocal + :noindex: + +log +--- +.. autofunction:: paddle.v2.fluid.layers.log + :noindex: + +square +------ +.. autofunction:: paddle.v2.fluid.layers.square + :noindex: + +softplus +-------- +.. autofunction:: paddle.v2.fluid.layers.softplus + :noindex: + +softsign +--------- +.. autofunction:: paddle.v2.fluid.layers.softsign + :noindex: + +brelu +----- +.. autofunction:: paddle.v2.fluid.layers.brelu + :noindex: + +leaky_relu +---------- +.. autofunction:: paddle.v2.fluid.layers.leaky_relu + :noindex: + +soft_relu +--------- +.. autofunction:: paddle.v2.fluid.layers.soft_relu + :noindex: + +elu +---- +.. autofunction:: paddle.v2.fluid.layers.elu + :noindex: + +relu6 +----- +.. autofunction:: paddle.v2.fluid.layers.relu6 + :noindex: + +pow +---- +.. autofunction:: paddle.v2.fluid.layers.pow + :noindex: + +hard_shrink +----------- +.. autofunction:: paddle.v2.fluid.layers.hard_shrink + :noindex: + +thresholded_relu +---------------- +.. autofunction:: paddle.v2.fluid.layers.thresholded_relu + :noindex: + +hard_sigmoid +------------- +.. autofunction:: paddle.v2.fluid.layers.hard_sigmoid + :noindex: + +swish +------ +.. autofunction:: paddle.v2.fluid.layers.swish + :noindex: diff --git a/doc/design/block.md b/doc/design/block.md index fab7f2dc481ae51aa982164dc5048d90fcdc2b0b..907a2def557fd472ac4d679c73447bd9107d1190 100644 --- a/doc/design/block.md +++ b/doc/design/block.md @@ -202,8 +202,8 @@ This `OpDesc` value is in the `ops` field of the `BlockDesc` value representing During the generation of the Protobuf message, the Block should store VarDesc (the Protobuf message which describes Variable) and OpDesc (the Protobuf message which describes Operator). -VarDesc in a block should have its name scope to avoid local variables affect parent block's name scope. -Child block's name scopes should inherit the parent's so that OpDesc in child block can reference a VarDesc that stored in parent block. For example: +VarDesc in a block should have its name scope to avoid local variables affecting parent block's name scope. +Child block's name scopes should inherit the parent's so that OpDesc in child block can reference a VarDesc that is stored in the parent block. For example: ```python a = pd.Variable(shape=[20, 20]) diff --git a/doc/design/memory_optimization.md b/doc/design/memory_optimization.md index 00f514711a46bfd5af3bae51e0d9225ecc4c8998..1f68cef4cc28cd005acbeaa5c03cc0d84a83939c 100644 --- a/doc/design/memory_optimization.md +++ b/doc/design/memory_optimization.md @@ -5,28 +5,28 @@ In a lecture from Andrew Ng, he attributes the recent sucess of AI due to a combination of these: -- availability of Big Data -- supercomputing power to process this Big Data over very large neural networks -- modern algorithms +- Availability of Big Data +- Supercomputing power to process this Big Data over very large neural networks +- Modern algorithms Following graph shows the details: ![](images/deep_learning.png) -Larger model usually brings better performance. However, GPU memory is certain limited. For example, the memory size of a GTX TITAN X is only 12GB. To train complex and large model, we have to take care of memory using. Besides, memory optimization is also necessary in both online/mobile inference. +Larger model usually bring better performance. However, GPU memory is limited. For example, the memory size of a GTX TITAN X is only 12GB. To train complex and large models, we have to take care of memory usage. Besides, memory optimization is also necessary in both online/mobile inference. ## Solution ### Basic Strategy -There are some basic strategies to make memory optimization, including in-place operation and memory sharing. +There are some basic strategies to improve memory usage, including in-place operations and memory sharing. #### In-place Operation In a relu activation operator: $y = \max(x, 0)$ -If the variable x is not used in any other operator, we can make an in-place operation. In other words, the memory block of variable y and variable x are the same. In-place operation will save 50% memory occupancy immediately. +If the variable x is not used in any other operator, we can make an in-place operation. In other words, the memory block of variable y and variable x will be the same. In-place operations will save 50% memory occupancy immediately. #### Memory Sharing @@ -40,18 +40,18 @@ d = op2(a) e = op3(d, f) ``` -In this case, variable a is no longer used, and op2 does not support in-place operation. After op2 finished, we can put the memory of variable a to a memory pool. Then, variable e can share the memory of variable a from the pool. +In this case, variable a is no longer used, and op2 does not support in-place operation. After op2 finishes, we can put the memory of variable a to a memory pool. Then, variable e can share the memory of variable a from the pool. ### Live Variable Analysis -It's not enough to only have some basic strategies. The prerequisite of memory optimization is to know if a variable is still "live" after an operation. +It's not enough to only have some basic strategies. The pre-requisite of memory optimization is to know if a variable is still "live" after an operation. In our design, the neural network topology is defined as a program. Luckily, [live variable analysis](https://en.wikipedia.org/wiki/Live_variable_analysis) is a classic problem in compilers which can be used in many stages, such as register allocation. -In compilers, the front end of the compilers translates programs into an intermediate language with an unbounded number of temporaries. This program must run on a machine with a bounded number of registers. Two temporaries a and b can fit into the same register, if a and b are never "in use" at the same time. Thus, many temporaries can fit in few registers; if they don't all fit, the excess temporaries can be kept in memory. +In compilers, the front end of the compiler translates programs into an intermediate language with an unbounded number of temporary variables. This program must run on a machine with a bounded number of registers. Two temporary variables a and b can fit into the same register, if a and b are never "in use" at the same time. Thus, many temporary variables can fit in few registers; if they don't all fit, the excess tempory variables can be kept in memory. -Therefore, the compiler needs to analyze the intermediate-representation program to determine which temporaries are in use at the same time. We say a variable is "live" if it holds a value that may be needed in the future, so this analysis is called liveness analysis. +Therefore, the compiler needs to analyze the intermediate-representation program to determine which temporary variables are in use at the same time. We say a variable is "live" if it holds a value that may be needed in the future, so this analysis is called liveness analysis. We can leran these techniques from compilers. There are mainly two stages to make live variable analysis: @@ -60,7 +60,7 @@ We can leran these techniques from compilers. There are mainly two stages to mak #### Control Flow Graph -To preform analyses on a program, it is often useful to make a control flow graph. A [control flow graph](https://en.wikipedia.org/wiki/Control_flow_graph) (CFG) in computer science is a representation, using graph notation, of all paths that might be traversed through a program during its execution. Each statement in the program is a node in the flow graph; if statemment x can be followed by statement y, there is an egde from x to y. +To perform analysis on a program, it is often useful to make a control flow graph. A [control flow graph](https://en.wikipedia.org/wiki/Control_flow_graph) (CFG) in computer science is a representation, using graph notation, of all paths that might be traversed through a program during its execution. Each statement in the program is a node in the flow graph; if statemment x can be followed by statement y, there is an egde from x to y. Following is the flow graph for a simple loop. @@ -68,18 +68,18 @@ Following is the flow graph for a simple loop. #### Dataflow Analysis -liveness of variable "flows" around the edges of the control flow graph; determining the live range of each variable is an example of a dataflow problem. [Dataflow analysis](https://en.wikipedia.org/wiki/Data-flow_analysis) is a technique for gathering information about the possible set of values calculated at various points in a computer program. +Liveness of variable "flows" around the edges of the control flow graph; determining the live range of each variable is an example of a dataflow problem. [Dataflow analysis](https://en.wikipedia.org/wiki/Data-flow_analysis) is a technique for gathering information about the possible set of values calculated at various points in a computer program. A simple way to perform data-flow analysis of programs is to set up dataflow equations for each node of the control flow graph and solve them by repeatedly calculating the output from the input locally at each node until the whole system stabilizes. - Flow Graph Terminology -A flow graph node has out-edges that lead to sucessor nodes, and in-edges that come from presucessor nodes. The set *pred[n]* is all the predecessors of node n, and *succ[n]* is the set of sucessors. +A flow graph node has out-edges that lead to sucessor nodes, and in-edges that come from predecessor nodes. The set *pred[n]* is all the predecessors of node n, and *succ[n]* is the set of sucessors. In former control flow graph, the out-edges of node 5 are 5 --> 6 and 5 --> 2, and *succ[5]* = {2, 6}. The in-edges of 2 are 5 --> 2 and 1 --> 2, and *pred[2]* = {1, 5}. - Uses and Defs -An assignmemt to a variable or temporary defines that variable. An occurence of a variable on the right-hand side of an assginment(or in other expressions) uses the variable. We can speak the *def* of a variable as the set of graph nodes that define it; or the *def* of a graph node as the set of variables that it defines; and the similarly for the *use* of a variable or graph node. In former control flow graph, *def(3)* = {c}, *use(3)* = {b, c}. +An assignmemt to a variable or temporary defines that variable. An occurence of a variable on the right-hand side of an assginment(or in other expressions) uses the variable. We can define the *def* of a variable as the set of graph nodes that define it; or the *def* of a graph node as the set of variables that it defines; and the similarly for the *use* of a variable or graph node. In former control flow graph, *def(3)* = {c}, *use(3)* = {b, c}. - Liveness @@ -168,9 +168,9 @@ class ControlFlowGraph(object): return self._program ``` -#### make dataflow analysis +#### Make dataflow analysis -We follow guide from compilers and try to solve the dataflow equation to get liveness of every variable. If the live-in of an operator node is different from the live-out, then we can make memory sharing. +We follow the guide from compilers and try to solve the dataflow equation to get liveness of every variable. If the live-in of an operator node is different from the live-out, then we can make memory sharing. For example: diff --git a/doc/design/operator_kernel_type.md b/doc/design/operator_kernel_type.md index aa82e96bf79319f1a57e2ad58aa9826e57be6470..f86e6b7a564ed23f2bddbec25da1c110014f941d 100644 --- a/doc/design/operator_kernel_type.md +++ b/doc/design/operator_kernel_type.md @@ -1,6 +1,6 @@ # Design Doc: The Keys of Operator Kernel Type ## Problem -An operator can have different kernel implementations, and each operator will have a map to store the related kernels. Fluid uses `OpKernelType` as a key to identify a unique Kernel. Before an operator runs, an certain kernel must be chosen by a key of `OpKernelType`. Currently, `OpKernelType` is defined as follows: +An operator can have different kernel implementations, and each operator will have a map to store the related kernels. Fluid uses `OpKernelType` as a key to identify a unique kernel. Before an operator runs, a certain type of kernel must be chosen via a key of `OpKernelType`. Currently, `OpKernelType` is defined as follows: ```cpp struct OpKernelType { @@ -10,13 +10,13 @@ struct OpKernelType { ``` For more details, please refer to [codes](https://github.com/PaddlePaddle/Paddle/blob/2d5ec16bc8a09fb8e0f62c89b116b0cd1d333907/paddle/framework/operator.h#L348-L374) in github. -It contains two keys, `Place` and `DataType`. And these two keys will be hashed to a unique key to represent a certain type of kernel. However, these two keys are not enough. We need a more complete representation of `OpKernelType`. +It contains two keys, `Place` and `DataType`. And these two keys will be hashed to a unique key to represent a certain type of kernel. However, these two keys do not provide enough information. We need a more complete representation of `OpKernelType`. -We often implement a kernel of an operator with some computing library in certain device(place). Please remind that computing library and device are not one-to-one corresponding. A device can have a lot of computing libraries and a computing library can also support several devices. +We often implement a kernel of an operator with some computing library on certain device(place). Please note that computing library and device do not have a one-to-one correspondence. A device can have a lot of computing libraries and a computing library can also support different devices. -For example, Eigen library can support Nvidia GPU/AMD GPU/CPU. And MKLDNN library can support Intel CPU/Intel FPGA. Both `Place` and `Library` should be a key of `OpKernelType`. +For example, Eigen library supports Nvidia GPU/AMD GPU/CPU and MKLDNN library supports Intel CPU/Intel FPGA. Both `Place` and `Library` should be a key of `OpKernelType`. -It's obvious that different DataTypes, like fp64/fp32/int8 will have different kernels. But the data layout of a Tensor will also lead to different implementation. Please refer to the batch norm operator [kernels](https://github.com/PaddlePaddle/Paddle/blob/a948fac4d0ad7e0412d373b8aabeb711c2899563/paddle/operators/batch_norm_op.cc#L180-L209). Data Layout should also be taken into consideration. +Different DataTypes, such as fp64/fp32/int8, will obviously have different kernels. But different data layout of a Tensor will also lead to different implementations. Please refer to the batch norm operator [kernels](https://github.com/PaddlePaddle/Paddle/blob/a948fac4d0ad7e0412d373b8aabeb711c2899563/paddle/operators/batch_norm_op.cc#L180-L209) as an example. Data layout should also be taken into consideration. ## Solution @@ -31,17 +31,17 @@ struct OpKernelType { }; ``` -Following is the details: +The details are as follows: ### Place -`Place` is defined as follows: +`Place` is defined as: ```cpp typedef boost::variant Place; ``` -`Place` is to represent the device memory where data is locating. +`Place` represents the device memory where data is located. ### Library @@ -52,10 +52,10 @@ One operator kernel is usually implemented based on one library. `Library` is de enum Library { Plain, MKLDNN, CUDNN }; ``` -We use `Plain` enumerator to represent default library. Since most operators in Fluid are implemented based on `Eigen` library, we take `Eigen` library as the `Plain` enumerator. -A library usually has a corresponding `DeviceContext` which contains some handles needed by computation. Fluid now have two default DeviceContexts in CPU and CUDA, `CPUDeviceContext` and `CUDADeviceContext`. `CPUDeviceContext` contains a Eigen library handle and `CDUADeviceContext` contains a Eigen library handle and cuBLAS handle. +We use `Plain` enumerator to represent default library. Since most operators in Fluid are implemented based on the `Eigen` library, we take `Eigen` library as the `Plain` enumerator. +A library usually has a corresponding `DeviceContext` which contains some handles needed for computation. Fluid now has two default DeviceContexts for CPU and CUDA, namely, `CPUDeviceContext` and `CUDADeviceContext`. `CPUDeviceContext` contains an Eigen library handle and `CDUADeviceContext` contains an Eigen library handle and a cuBLAS handle. -If we want to support new Library, a new enumerator need to be added to `Library` and a new corresponding `LibraryDeviceContext` will be created. +If we want to support new library, a new enumerator need to be added to `Library` and a corresponding new `LibraryDeviceContext` need to be created. ### DataType @@ -67,15 +67,15 @@ If we want to support new Library, a new enumerator need to be added to `Library Actually, a Tensor is a view of a block of memory. Besides a pointer to the memory, we also have to get some other descriptions of this block of memory, such as shape(ddim), stride, and layout. -Different layout leads to different implementation of operator kernel. There are mainly 4 principles we have to follow to support layout in our fluid framework. +Different layout leads to different implementation of the operator kernel. There are mainly 4 principles we have to follow to support layout in our Fluid framework. -- We take layout as a data member of Tensor. Layout is actually a enum variable. If fluid is built with MKLDNN, then, the memory format in MKLDNN will be added into this enum variable too. +- We take layout as a data member of Tensor. Layout is actually a enum variable. If Fluid is built with MKLDNN, then the memory format in MKLDNN will also be added into this enum variable. -- Users have to set layout for input data. And some operators like fill_constant/random, also have to set layout of generating data. Of course, we can have some default layout, like NCHW. +- Users have to set layout for input data. And some operators like fill_constant/random, also have to set layout for generating data. Of course, we can have some default layout, like NCHW. -- The inference of Layout is at run-time, not compile-time. +- The inference of Layout is at run-time, not at compile-time. -- Every operator have to implement different kernels for different layouts. Let's take MKLDNN as an example, if we want to implement a MKLDNN convolution operator, we have to realize all the kernels for different layout, list at [here](http://01org.github.io/mkl-dnn/structmkldnn_1_1memory.html). And we will have a special macro to do registering kernels for MKLDNN operators. +- Every operator has to implement different kernels for different layouts. Let's take MKLDNN as an example. If we want to implement an MKLDNN convolution operator, we have to implement all the kernels for different layouts, which are listed [here](http://01org.github.io/mkl-dnn/structmkldnn_1_1memory.html). And we will have a special macro to register kernels for MKLDNN operators. `Layout` is also defined as a enum variable: diff --git a/doc/design/python_api.md b/doc/design/python_api.md index cb5fdc765b7126fc66a1c8978d4b96c0dc5a9f2c..73f6d7b90c7dca0d48109cf3d28d5f7cd56b5c0b 100644 --- a/doc/design/python_api.md +++ b/doc/design/python_api.md @@ -279,6 +279,26 @@ class LayerHelper(object): return tmp ``` +### Return value of layer functions + +The layer will return a Variable, which is also the output of an operator. However, outputs of a layer function have more attributes than an operator. There are parameter variables, and their gradient variables need to return. To return them is useful. For example, + +1. Users can debug the network by printing parameter gradients. +2. Users can append attributes to a parameter, such as, `param.stop_gradient=True` will make a parameter stop generate the gradient. We can fix the parameter value during training by using this attribute. + +However, it is good to return a Variable for layers, since all layers and operators use Variables as their parameters. We can just append a `param` field and a `grad` field for layer function since the Python is dynamic typing. + +The sample usage is + +```python +data = fluid.layers.data(...) +hidden = fluid.layers.fc(data, ...) +... + +executor.run(fetch_list=[hidden.param, hidden.param.grad], ...) +``` + + ## Optimizer [Optimizer Design Doc](./optimizer.md) diff --git a/doc/design/var_desc.md b/doc/design/var_desc.md index 0b2958c1b10ef6a6ce51aa75f61e15a7f2d94b3f..89fa95326c5c4909137544c6b5fd574e1281abe2 100644 --- a/doc/design/var_desc.md +++ b/doc/design/var_desc.md @@ -1,12 +1,12 @@ ## Background -PaddlePaddle divides the description of neural network computation graph into two stages: compile time and runtime. +PaddlePaddle divides the description of neural network computation into two stages: compile time and runtime. At compile time, the neural network computation is described as a `ProgramDesc` whereas at runtime an `Executor` interprets the `ProgramDesc` to compute the operations. -PaddlePaddle use proto message to describe compile time graph because +PaddlePaddle use proto message to describe compile time program because -1. Computation graph should be able to be saved to a file. -1. In distributed training, the graph will be serialized and send to multiple workers. +1. The computation program description must be serializable and saved in a file. +1. During distributed training, the sreialized program will be sent to multiple workers. It should also be possible to break the program into different components, each of which can be executed on different workers. -The computation graph is constructed by Data Node and Operation Node. The concept to represent them is in the table below. +The computation `Program` consists of nested `Blocks`. Each `Block` will consist of data(i.e. `Variable`) and `Operations`. The concept to represent them is in the table below. | |compile time|runtime| |---|---|---| diff --git a/doc/getstarted/build_and_install/build_from_source_cn.rst b/doc/getstarted/build_and_install/build_from_source_cn.rst index 41ac07ca5674d2c121baba77c58226ad328cd681..71904dc41ed0d946867d890cc585e1b88450ca8c 100644 --- a/doc/getstarted/build_and_install/build_from_source_cn.rst +++ b/doc/getstarted/build_and_install/build_from_source_cn.rst @@ -32,6 +32,16 @@ PaddlePaddle主要使用 `CMake `_ 以及GCC, G++作为编译 pip install build/python/dist/*.whl +如果机器中已经安装过PaddlePaddle,有两种方法: + +.. code-block:: bash + + 1. 先卸载之前的版本,再重新安装 + pip uninstall paddlepaddle + pip install build/python/dist/*.whl + + 2. 直接升级到更新的版本 + pip install build/python/dist/*.whl -U .. _run_test: diff --git a/doc/getstarted/build_and_install/build_from_source_en.rst b/doc/getstarted/build_and_install/build_from_source_en.rst index 92211aee8c3bc0ae6e1a38311d40ddf92117cac7..27f73b2e2c029b41d514e1612912ed1c335605b6 100644 --- a/doc/getstarted/build_and_install/build_from_source_en.rst +++ b/doc/getstarted/build_and_install/build_from_source_en.rst @@ -36,6 +36,16 @@ machine or copy it to the target machine. pip install build/python/dist/*.whl +If the machine has installed PaddlePaddle before, there are two methods: + +.. code-block:: bash + + 1. uninstall and reinstall + pip uninstall paddlepaddle + pip install build/python/dist/*.whl + + 2. upgrade directly + pip install build/python/dist/*.whl -U .. _run_test: diff --git a/doc/howto/dev/new_op_cn.md b/doc/howto/dev/new_op_cn.md index 3109d72001f13a38a93b9ca39d3f8525c8cea9f1..92996585674b46f45549b972b9f295503b1c7f8c 100644 --- a/doc/howto/dev/new_op_cn.md +++ b/doc/howto/dev/new_op_cn.md @@ -24,7 +24,7 @@ - `framework::OperatorWithKernel`:继承自OperatorBase,Op有计算函数,称作有Kernel。 - `class OpProtoAndCheckerMaker`:描述该Op的输入、输出、属性、注释,主要用于Python API接口生成 -依据是否包含kernel,可以将Op分为两种:包含Kernel的Op和不包含kernel的Op,前者Op的定义继承自`OperatorBase`,后者继承自`OperatorWithKernel`。本教程主要介绍带Kernel的Op如何写,简单总结Op需要包含的内容如下: +依据是否包含kernel,可以将Op分为两种:包含Kernel的Op和不包含kernel的Op,前者Op的定义继承自`OperatorWithKernel`,后者继承自`OperatorBase`。本教程主要介绍带Kernel的Op如何写,简单总结Op需要包含的内容如下: 内容 | 定义位置 diff --git a/doc/howto/index_cn.rst b/doc/howto/index_cn.rst index ccd909770253bb85dbc8a5a2560594076c2f68b0..e0c69f7a6a4043abe999af6c8dd2555178b68424 100644 --- a/doc/howto/index_cn.rst +++ b/doc/howto/index_cn.rst @@ -9,6 +9,7 @@ usage/cmd_parameter/index_cn.rst usage/cluster/cluster_train_cn.md + usage/capi/index_cn.rst 开发标准 -------- diff --git a/doc/howto/read_source.md b/doc/howto/read_source.md index e4211abb3be9cace80bc14dbe3db3e0a31221dd0..31987920f32f217ac2db42548874cfe7da57dd72 100644 --- a/doc/howto/read_source.md +++ b/doc/howto/read_source.md @@ -26,16 +26,16 @@ sgd_optimizer = fluid.optimizer.SGD(learning_rate=0.001) sgd_optimizer.minimize(avg_cost) ``` -- Variables: `x`, `y`, `y_predict`, `cost` and `avg_cost`. [Python](https://github.com/PaddlePaddle/Paddle/blob/develop/python/paddle/v2/fluid/framework.py#L93) -- Layers: `fluid.layers.data`, `fluid.layers.fc` and `fluid.layers.mean` are layers. [Python](https://github.com/PaddlePaddle/Paddle/blob/develop/python/paddle/v2/fluid/layers.py) +- Variables: `x`, `y`, `y_predict`, `cost` and `avg_cost`. [Python](https://github.com/PaddlePaddle/Paddle/blob/develop/python/paddle/v2/fluid/framework.py#) +- Layers: `fluid.layers.data`, `fluid.layers.fc` and `fluid.layers.mean` are layers. [Python](https://github.com/PaddlePaddle/Paddle/tree/develop/python/paddle/v2/fluid/layers) - Every Layer has one or more operators and variables/parameters - All the operators are defined at [`paddle/operators/`](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/operators). Other worth-looking files: - Base class: [`paddle/framework/operator.h`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/framework/operator.h) - Operator Registration: [`paddle/framework/op_registry.h`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/framework/op_registry.h) - Operator Lookup: [`paddle/framework/op_info.h`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/framework/op_info.h) - Optimizer: `fluid.optimizer.SGD`. It does the following - - Add backward operators. [[Python](https://github.com/PaddlePaddle/Paddle/blob/develop/python/paddle/v2/fluid/backward.py), [C++](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/framework/backward.cc)] - - Add optimizer operators. [[Python](https://github.com/PaddlePaddle/Paddle/blob/develop/python/paddle/v2/fluid/optimizer.py), [C++](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/optimizer)] + - Add backward operators. [[Python](https://github.com/PaddlePaddle/Paddle/blob/develop/python/paddle/v2/fluid/backward.py)] + - Add optimizer operators. [[Python](https://github.com/PaddlePaddle/Paddle/blob/develop/python/paddle/v2/fluid/optimizer.py)] # Run Time diff --git a/doc/howto/usage/capi/compile_paddle_lib_cn.md b/doc/howto/usage/capi/compile_paddle_lib_cn.md new file mode 100644 index 0000000000000000000000000000000000000000..ac5ecffe2ea8ddc3703a32e9a0a8ee83bbe5dd14 --- /dev/null +++ b/doc/howto/usage/capi/compile_paddle_lib_cn.md @@ -0,0 +1,122 @@ +## 编译 PaddlePaddle 预测库 + +### 概述 + +使用 C-API 进行预测依赖于将 PaddlePaddle 核心代码编译成链接库,只需在编译时需配制下面这些编译选项: + +必须配置选项: +- `WITH_C_API`,必须配置为`ON`。 + +推荐配置选项: +- `WITH_PYTHON`,推荐配置为`OFF` +- `WITH_SWIG_PY`,推荐配置为`OFF` +- `WITH_GOLANG`,推荐设置为`OFF` + +可选配置选项: +- `WITH_GPU`,可配置为`ON/OFF` +- `WITH_MKL`,可配置为`ON/OFF` + +对推荐配置中的选项建议按照设置,以避免链接不必要的库。其它可选编译选项按需进行设定。 + +下面的代码片段从github拉取最新代码,配制编译选项(需要将PADDLE_ROOT替换为PaddlePaddle预测库的安装路径): + +```shell +PADDLE_ROOT=/path/of/capi +git clone https://github.com/PaddlePaddle/Paddle.git +cd Paddle +mkdir build +cd build +cmake -DCMAKE_INSTALL_PREFIX=$PADDLE_ROOT \ + -DCMAKE_BUILD_TYPE=Release \ + -DWITH_C_API=ON \ + -DWITH_SWIG_PY=OFF \ + -DWITH_GOLANG=OFF \ + -DWITH_PYTHON=OFF \ + -DWITH_MKL=OFF \ + -DWITH_GPU=OFF \ + .. +``` + +执行上述代码生成Makefile文件后,执行:`make && make install`。成功编译后,使用C-API所需的依赖(包括:(1)编译出的PaddlePaddle预测库和头文件;(2)第三方链接库和头文件)均会存放于`PADDLE_ROOT`目录中。 + +编译成功后在 `PADDLE_ROOT` 下会看到如下目录结构(包括了编译出的PaddlePaddle头文件和链接库,以及第三方依赖链接库和头文件(如果需要,由链接方式决定)): + +```text +├── include +│   └── paddle +│   ├── arguments.h +│   ├── capi.h +│   ├── capi_private.h +│   ├── config.h +│   ├── error.h +│   ├── gradient_machine.h +│   ├── main.h +│   ├── matrix.h +│   ├── paddle_capi.map +│   └── vector.h +├── lib +│   ├── libpaddle_capi_engine.a +│   ├── libpaddle_capi_layers.a +│   ├── libpaddle_capi_shared.so +│   └── libpaddle_capi_whole.a +└── third_party + ├── gflags + │   ├── include + │   │   └── gflags + │   │   ├── gflags_completions.h + │   │   ├── gflags_declare.h + │   │   ... + │   └── lib + │   └── libgflags.a + ├── glog + │   ├── include + │   │   └── glog + │   │   ├── config.h + │   │   ... + │   └── lib + │   └── libglog.a + ├── openblas + │   ├── include + │   │   ├── cblas.h + │   │   ... + │   └── lib + │   ... + ├── protobuf + │   ├── include + │   │   └── google + │   │   └── protobuf + │   │   ... + │   └── lib + │   └── libprotobuf-lite.a + └── zlib + ├── include + │   ... + └── lib + ... + +``` + +### 链接说明 + +目前提供三种链接方式: + +1. 链接`libpaddle_capi_shared.so` 动态库 + - 使用 PaddlePaddle C-API 开发预测程序链接`libpaddle_capi_shared.so`时,需注意: + 1. 如果编译时指定编译CPU版本,且使用`OpenBLAS`数学库,在使用C-API开发预测程序时,只需要链接`libpaddle_capi_shared.so`这一个库。 + 1. 如果是用编译时指定CPU版本,且使用`MKL`数学库,由于`MKL`库有自己独立的动态库文件,在使用PaddlePaddle C-API开发预测程序时,需要自己链接MKL链接库。 + 1. 如果编译时指定编译GPU版本,CUDA相关库会在预测程序运行时动态装载,需要将CUDA相关的库设置到`LD_LIBRARY_PATH`环境变量中。 + - 这种方式最为简便,链接相对容易,**在无特殊需求情况下,推荐使用此方式**。 + +2. 链接静态库 `libpaddle_capi_whole.a` + - 使用PaddlePaddle C-API 开发预测程序链接`libpaddle_capi_whole.a`时,需注意: + 1. 需要指定`-Wl,--whole-archive`链接选项。 + 1. 需要显式地链接 `gflags`、`glog`、`libz`、`protobuf` 等第三方库,可在`PADDLE_ROOT/third_party`下找到。 + 1. 如果在编译 C-API 时使用OpenBLAS数学库,需要显示地链接`libopenblas.a`。 + 1. 如果在编译 C-API 是使用MKL数学库,需要显示地链接MKL的动态库。 + +3. 链接静态库 `libpaddle_capi_layers.a`和`libpaddle_capi_engine.a` + - 使用PaddlePaddle C-API 开发预测程序链接`libpaddle_capi_whole.a`时,需注意: + 1. 这种链接方式主要用于移动端预测。 + 1. 为了减少生成链接库的大小把`libpaddle_capi_whole.a`拆成以上两个静态链接库。 + 1. 需指定`-Wl,--whole-archive -lpaddle_capi_layers` 和 `-Wl,--no-whole-archive -lpaddle_capi_engine` 进行链接。 + 1. 第三方依赖库需要按照与方式2同样方法显示地进行链接。 diff --git a/doc/howto/usage/capi/images/csr.png b/doc/howto/usage/capi/images/csr.png new file mode 100644 index 0000000000000000000000000000000000000000..3dc10b8de4f6d3f517624956b1694b689405a031 Binary files /dev/null and b/doc/howto/usage/capi/images/csr.png differ diff --git a/doc/howto/usage/capi/images/sequence_data.png b/doc/howto/usage/capi/images/sequence_data.png new file mode 100644 index 0000000000000000000000000000000000000000..6e47a46b8955dfe977e85898fe3c9f33ed28de7e Binary files /dev/null and b/doc/howto/usage/capi/images/sequence_data.png differ diff --git a/doc/howto/usage/capi/images/workflow_of_CAPI.png b/doc/howto/usage/capi/images/workflow_of_CAPI.png new file mode 100644 index 0000000000000000000000000000000000000000..a4399ade048b3fe10d2d9c714bc34333ca068edb Binary files /dev/null and b/doc/howto/usage/capi/images/workflow_of_CAPI.png differ diff --git a/doc/howto/usage/capi/index_cn.rst b/doc/howto/usage/capi/index_cn.rst new file mode 100644 index 0000000000000000000000000000000000000000..fd774fbc742671c5a8009cb742f2c9d06a525199 --- /dev/null +++ b/doc/howto/usage/capi/index_cn.rst @@ -0,0 +1,9 @@ +PaddlePaddle C-API +================== + +.. toctree:: + :maxdepth: 1 + + compile_paddle_lib_cn.md + organization_of_the_inputs_cn.md + workflow_of_capi_cn.md diff --git a/doc/howto/usage/capi/organization_of_the_inputs_cn.md b/doc/howto/usage/capi/organization_of_the_inputs_cn.md new file mode 100644 index 0000000000000000000000000000000000000000..563ec5ca21ec5d75800fa201943d65e6d6fe51ea --- /dev/null +++ b/doc/howto/usage/capi/organization_of_the_inputs_cn.md @@ -0,0 +1,285 @@ +## 输入/输出数据组织 + +这篇文档介绍在使用 PaddlePaddle C-API 时如何组织输入数据,以及如何解析神经网络前向计算的输出结果。 + +### 输入/输出数据类型 +在C-API中,按照基本数据类型在PaddlePaddle内部的定义和实现,输入数据可分为: +1. 一维整型数组 +1. 二维浮点型矩阵 + - 稠密矩阵 + - 稀疏矩阵 + +说明: +1. 一维数组**仅支持整型值**; + - 常用于自然语言处理任务,例如:表示词语在词典中的序号; + - 分类任务中类别标签; +1. 逻辑上高于二维的数据(例如含有多个通道的图片,视频等)在程序实现中都会转化为二维矩阵,转化方法在相应的领域都有通用解决方案,需要使用者自己了解并完成转化; +1. 二维矩阵可以表示行向量和列向量,任何时候如果需要浮点型数组(向量),都应使用C-API中的矩阵来表示,而不是C-API中的一维数组。 +1. 不论是一维整型数组还是二维浮点数矩阵,**为它们附加上序列信息将变成序列输入。PaddlePaddle 会通过判数据是否附带有序列信息来判断一个向量/矩阵是否是一个序列**。当非序列输入时,无需关心和处理序列信息。关于什么是“序列信息”,下文会详细进行介绍。 + +### 基本使用概念 + +- 在PaddlePaddle内部,神经网络中一个计算层的输入/输出被组织为一个 `Argument` 结构体,如果神经网络有多个输入或者多个输入,每一个输入/输入都会对应有自己的`Argument`。 +- `Argument` 并不真正“存储”数据,而是将输入/输出信息有机地组织在一起。 +- 在`Argument`内部由`IVector`(对应着上文提到的一维整型数组)和`Matrix`(对应着上文提到的二维浮点型矩阵)来实际存储数据;由 `Sequence Start Positions` (下文详细解释) 来描述输入/输出的序列信息。 + +- **注**: + 1. 这篇文档之后部分将会统一使用`argument`来特指PaddlePaddle中神经网络计算层一个输入/输出数据。 + 1. 使用`paddle_ivector`来特指PaddlePaddle中的一维整型数组。 + 1. 使用`paddle_matrix`来特指PaddlePaddle中的二维浮点型矩阵。 + +### 组织输入数据 +- 一维整型数组 + + 概念上可以将`paddle_ivector`理解为一个一维的整型数组,通常用于表示离散的类别标签,或是在自然语言处理任务中表示词语在字典中的序号。下面的代码片段创建了含有三个元素`1`、`2`、`3`的`paddle_ivector`。 + ```c + int ids[] = {1, 2, 3}; + paddle_ivector ids_array = + paddle_ivector_create(ids, sizeof(ids) / sizeof(int), false, false); + CHECK(paddle_arguments_set_ids(in_args, 0, ids_array)); + ``` + +- **稠密矩阵** + - 一个`m×n`的稠密矩阵是一个由`m`行`n`列元素排列成的矩形阵列,矩阵里的元素是浮点数。对神经网络来说,矩阵的高度`m`是一次预测接受的样本数目,宽度$n$是神经网络定义时,`paddle.layer.data`的`size`。 + - 下面的代码片段创建了一个高度为1,宽度为`layer_size`的稠密矩阵,矩阵中每个元素的值随机生成。 + + ```c + paddle_matrix mat = paddle_matrix_create( + /* height = batch size */ 1, + /* width = dimensionality of the data layer */ layer_size, + /* whether to use GPU */ false); + + paddle_real* array; + // Get the pointer pointing to the start address of the first row of the + // created matrix. + CHECK(paddle_matrix_get_row(mat, 0, &array)); + + // Fill the matrix with a randomly generated test sample. + srand(time(0)); + for (int i = 0; i < layer_size; ++i) { + array[i] = rand() / ((float)RAND_MAX); + } + + // Assign the matrix to the argument. + CHECK(paddle_arguments_set_value(in_args, 0, mat)); + ``` + +- **稀疏矩阵** + + PaddlePaddle C-API 中 稀疏矩阵使用[CSR(Compressed Sparse Row Format)](https://en.wikipedia.org/wiki/Sparse_matrix#Compressed_sparse_row_(CSR,_CRS_or_Yale_format))格式存储。下图是CSR存储稀疏矩阵的示意图。 +

+
图1. 稀疏矩阵存储示意图 +

+ + CSR存储格式通过:(1)非零元素的值(上图中的`values`);(2)行偏移(上图中的`row offsets`):每一行元素在`values`中的起始偏移,`row offsets`中元素个数总是等于行数 + 1;(3)非零元素的列号(上图中的`column indices`)来确定稀疏矩阵的内容。 + + 在PaddlePaddle C-API中,通过调用以下接口创建稀疏矩阵: + + ```c + PD_API paddle_matrix paddle_matrix_create_sparse( + uint64_t height, uint64_t width, uint64_t nnz, bool isBinary, bool useGpu); + ``` + + 1. 创建稀疏矩阵时需要显示地指定矩阵的(1)高度(`height`,在神经网络中等于一次预测处理的样本数)(2)宽度(`width`,`paddle.layer.data`的`size`)以及(3)非零元个数(`nnz`)。 + 1. 当上述接口第4个参数`isBinary`指定为`true`时,**只需要设置行偏移(`row_offset`)和列号(`colum indices`),不需要提供元素值(`values`)**,这时行偏移和列号指定的元素默认其值为1。 + + 下面的代码片段创建了一个CPU上的二值稀疏矩阵: + + ```c + paddle_matrix mat = paddle_matrix_create_sparse(1, layer_size, nnz, true, false); + int colIndices[] = {9, 93, 109}; // layer_size here is greater than 109. + int rowOffset[] = {0, sizeof(colIndices) / sizeof(int)}; + + CHECK(paddle_matrix_sparse_copy_from(mat, + rowOffset, + sizeof(rowOffset) / sizeof(int), + colIndices, + (colIndices) / sizeof(int), + NULL /*values array is NULL.*/, + 0 /*size of the value arrary is 0.*/)); + CHECK(paddle_arguments_set_value(in_args, 0, mat)); + ``` + 下面的代码片段在创建了一个CPU上的带元素值的稀疏矩阵: + ```c + paddle_matrix mat = paddle_matrix_create_sparse(1, layer_size, nnz, false, false); + int colIndices[] = {9, 93, 109}; // layer_size here is greater than 109. + int rowOffset[] = {0, sizeof(colIndices) / sizeof(int)}; + float values[] = {0.5, 0.5, 0.5}; + + CHECK(paddle_matrix_sparse_copy_from(mat, + rowOffset, + sizeof(rowOffset) / sizeof(int), + colIndices, + sizeof(colIndices) / sizeof(int), + values, + sizeof(values) / sizeof(float))); + ``` + 注意事项: + 1. 移动端预测**不支持**稀疏矩阵及相关的接口。 + +### 组织序列信息 + +多个排成一列的元素(可以是整型、浮点数、浮点数向量等)构成一个序列,元素之间的顺序是序列所携带的重要信息。不同序列可能会含有不同数目个元素。在 PaddlePaddle 中,序列输入/输出数据是在上文介绍的**数据输入(一维整型数组,二维浮点数矩阵)基础上,附加上序列信息**。下面详细解释什么是“序列信息”。 + +我们将神经网络一次计算接受的所有输入样本称之为一个`batch`(可以含有一条或多条样本),每一个序列在整个`batch`中的偏移,就是PaddlePaddle中所指的**序列信息**,称之为“sequence start positions”。PaddlePaddle 支持两种序列类型: + +1. 单层序列 + - 序列中的每一个元素是非序列,是进行计算的基本单位,不可再进行拆分。 + - 例如:自然语言中的句子是一个序列,序列中的元素是词语; +1. 双层序列 + - 序列中的每一个元素又是一个序列。 + - 例如:自然语言中的段落是一个双层序列;段落是由句子构成的序列;句子是由词语构成的序列。 + - 双层序列在处理长序列的任务或是构建层级模型时会发挥作用。 + +这篇文档之后部分会统一使用`sequence_start_positions`来特指:PaddlePaddle中神经网络计算层输入/输出所携带的序列信息。 + +对双层序列来讲,不仅要提供每一个外层序列在整个`batch`中的偏移,每一个外层序列又含有若干个内层序列,需要同时提供每一个内层序列在整个`batch`中的偏移。也就是说:**双层序列需要设置分别为外层序列和内层序列分别设置`sequence_start_positions`信息**。 + +**注:** +1. 不论序列中的元素在内存中占用多少实际存储空间,`sequence_start_positions`表示的偏移是以“序列中的一个元素”作为统计的基本单位,而不是相对`batch`起始存储地址以数据的存储大小为单位的偏移。 +1. 非序列输入不携带`sequence_start_positions`,非序列输入无需构造`sequence_start_positions`。 +1. **不论是单层序列还是双层序列的序列信息,都使用`paddle_ivector`(也就是PaddlePaddle中的一维整型数组)来存储。** + +图2 是PaddlePaddle中单层序列和双层序列存储示意图。 +

+
图2. 序列输入示意图 +

+ +- 单层序列 + + 图2 (a) 展示了一个含有4个序列的`batch`输入: + 1. 4个序列的长度分别为:5、3、2、4; + 1. 这时的`sequence_start_positions`为:`[0, 5, 8, 10, 14]`; + 1. 本地训练. 不论数据域是`paddle_ivector`类型还是`paddle_matrix`类型,都可以通过调用下面的接口为原有的数据输入附加上序列信息,使之变为一个单层序列输入,代码片段如下: + + ```c + int seq_pos_array[] = {0, 5, 8, 10, 14}; + paddle_ivector seq_pos = paddle_ivector_create( + seq_pos_array, sizeof(seq_pos_array) / sizeof(int), false, false); + // Suppose the network only has one input data layer. + CHECK(paddle_arguments_set_sequence_start_pos(in_args, 0, 0, seq_pos)); + ``` + +- 双层序列 + + 图2 (b) 展示了一个含有4个序列的`batch`输入; + 1. 4个序列的长度分别为:5、3、2、4;这四个序列又分别含有3、2、1、2个子序列; + 1. 这时的需要同时提供: + - 外层序列在`batch`中的起始偏移`:[0, 5, 8, 10, 14]`; + - 内层序列在`batch`中的起始偏移:`[0, 2, 3, 5, 7, 8, 10, 13, 14]`; + 1. 不论数据域是`paddle_ivector`类型还是`paddle_matrix`类型,这时需要调用创建序列信息和为`argument`设置序列信息的接口**两次**,分别为数据输入添加外层序列和内层序列的序列信息,使之变为一个双层序列输入,代码片段如下: + ```c + // set the sequence start positions for the outter sequences. + int outter_seq_pos_array[] = {0, 5, 8, 10, 14}; + paddle_ivector seq_pos = + paddle_ivector_create(outter_seq_pos_array, + sizeof(outter_pos_array) / sizeof(int), + false, + false); + // The third parameter of this API indicates the sequence level. + // 0 for the outter sequence. 1 for the inner sequence. + // If the input is a sequence not the nested sequence, the third parameter is + // fixed to be 0. + CHECK(paddle_arguments_set_sequence_start_pos(in_args, 0, 0, seq_pos)); + + // set the sequence start positions for the outter sequences. + int inner_seq_pos_array[] = {0, 2, 3, 5, 7, 8, 10, 13, 14}; + paddle_ivector seq_pos = paddle_ivector_create( + inner_pos_array, sizeof(inner_pos_array) / sizeof(int), false, false); + // The third parameter of this API indicates the sequence level. + // 0 for the outter sequence. 1 for the inner sequence. + CHECK(paddle_arguments_set_sequence_start_pos(in_args, 0, 1, seq_pos)); + ``` + +注意事项: +1. 当一个`batch`中含有多个序列,**不支持序列长度为`0`的序列(也就是空输入)** 作为输入。不同计算层对空输入的处理策略有可能不同,潜在会引起未定义行为,或者引起行时错误,请在输入时进行合法性检查。 + +### Python 端数据类型说明 + +下表列出了Python端训练接口暴露的数据类型(`paddle.layer.data`函数`type`字段的取值)对应于调用C-API需要创建的数据类型: + + + +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Python 端数据类型C-API 输入数据类型
paddle.data_type.integer_value整型数组,无需附加序列信息
paddle.data_type.dense_vector浮点型稠密矩阵,无需附加序列信息
paddle.data_type.sparse_binary_vector浮点型稀疏矩阵,无需提供非零元的值,默认为1,无需附加序列信息
paddle.data_type.sparse_vector浮点型稀疏矩阵,需提供非零元的值,无需附加序列信息
paddle.data_type.integer_value_sequence整型数组,需附加序列信息
paddle.data_type.dense_vector_sequence浮点型稠密矩阵,需附加序列信息
paddle.data_type.sparse_binary_vector_sequence浮点型稀疏矩阵,无需提供非零元的值,默认为1,需附加序列信息
paddle.data_type.sparse_vector_sequence浮点型稀疏矩阵,需提供非零元的值,需附加序列信息
paddle.data_type.integer_value_sub_sequence整型数组,需附加双层序列信息
paddle.data_type.dense_vector_sub_sequence浮点型稠密矩阵,需附加双层序列信息
paddle.data_type.sparse_binary_vector_sub_sequence浮点型稀疏矩阵,无需提供非零元的值,默认为1,需附加双层序列信息
paddle.data_type.sparse_vector_sub_sequence浮点型稀疏矩阵,需提供非零元的值,需附加双层序列信息
+ +
+ + +### 输出数据 + +PaddlePaddle中一个计算层的输出数据组织方式和输入数据组织方式完全相同。一个输出数据同样被组织为一个`argument`,`argument`通过`paddle_matrix`或`paddle_ivector`存数数据,如果输出是一个序列,那么会携带有`sequence_start_positions`信息。调用C-API相关接口,读取需要的结果即可。 + +### 总结 + +- 在PaddlePaddle内部,神经网络中一个计算层的输入/输出被组织为`argument`。 +- `argument`并不真正“存储”数据,而是将输入/输出信息有机地组织在一起。 +- 在`argument`内部由`paddle_ivector`(一维整型数组)和`paddle_matrix`(二维浮点型矩阵)来实际存储数据。 +如果是一个序列输入/输出由 `sequence start positions` 来记录输入/输出的序列信息。 + +于是,在组织神经网络输入时,需要思考完成以下工作: +1. 为每一个输入/输出创建`argument`。 + - C-API 中操作`argument`的接口请查看[argument.h](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/arguments.h)。 +1. 为每一个`argument`创建`paddle_matrix`或者`paddle_ivector`来存储数据。 + - C-API 中操作`paddle_ivector`的接口请查看 [vector.h](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/vector.h)。 + - C-API 中操作`paddle_matrix`的接口请查看[matrix.h](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/matrix.h)。 +1. 如果输入是序列数据,需要创建并填写`sequence_start_positions`信息。 + - 通过调用 [`paddle_arguments_set_sequence_start_pos`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/arguments.h#L137) 来为一个`argument`添加序列信息。 + - 通过调用 [`paddle_arguments_get_sequence_start_pos`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/arguments.h#L150) 来读取一个`argument`添加序列信息。 + - 接口说明请查看 [argument.h](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/arguments.h) 文件。 diff --git a/doc/howto/usage/capi/workflow_of_capi_cn.md b/doc/howto/usage/capi/workflow_of_capi_cn.md new file mode 100644 index 0000000000000000000000000000000000000000..e0a42fff12cf0f53dee18165e059150861524f74 --- /dev/null +++ b/doc/howto/usage/capi/workflow_of_capi_cn.md @@ -0,0 +1,119 @@ +## C-API 使用流程 + +这篇文档介绍 PaddlePaddle C-API 整体使用流程。 + +### 使用流程 + +使用 C-API 的工作流程如图1所示,分为(1)准备预测模型和(2)预测程序开发两大部分。 + +

+
图1. C-API使用流程示意图 +

+ +- 准备预测模型 + 1. 只将神经网络结构进行序列化。 + - 只对神经网络结构进行序列化,加载模型需同时指定:网络结构的序列化结果和模型参数存储目录。 + 1. 将网络结构定义和训练结束存储下来的模型参数文件(多个)合并入一个文件。 + - 神经网络模型结构和训练好的模型将被序列化合并入一个文件。 + - 预测时只需加载一个文件便于发布。 + - **注意**:以上两种方式只需选择其一即可。 +- 调用 C-API 开发预测序 + 1. 初始化PaddlePaddle运行环境。 + 1. 加载预测模型。 + 1. 创建神经网络输入,组织输入数据。 + 1. 进行前向计算,获得计算结果。 + 1. 清理和结束。 + +### 准备预测模型 + +准备预测模型部分,我们以手写数字识别任务为例进行介绍。手写数字识别任务定义了一个含有[两个隐层的简单全连接网络](https://github.com/PaddlePaddle/book/blob/develop/02.recognize_digits/README.cn.md#softmax回归softmax-regression),网络接受一幅图片作为输入,将图片分类到 0 ~ 9 类别标签之一。完整代码可以查看[此目录](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/capi/examples/model_inference/dense) 中的相关脚本。 + +调用C-API开发预测程序需要一个训练好的模型,运行[MNIST手写数字识别目录](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/capi/examples/model_inference/dense)下的[mnist_v2.py](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/examples/model_inference/dense/mnist_v2.py)脚本,在终端执行`python mnist_v2.py`,会使用 PaddlePaddle 内置的 [MNIST 数据集](http://yann.lecun.com/exdb/mnist/)进行训练。训练好的模型默认保存在当前运行目录下的`models`目录中。 + +下面,我们将训练结束后存储下来的模型转换成预测模型。 + +1. 序列化神经网络模型配置 + + PaddlePaddle 使用 protobuf 来传输网络配置文件中定义的网络结构和相关参数,使用 C-API 进行预测时,需要将网络结构使用 protobuf 进行序列化,写入文件中。 + + 调用[`paddle.utils.dump_v2_config`](https://github.com/PaddlePaddle/Paddle/tree/develop/python/paddle/utils/dump_v2_config.py)中的`dump_v2_config`函数能够将使用 PaddlePaddle V2 API 定义的神经网络结构 dump 到指定文件中,示例代码如下: + + ```python + from paddle.utils.dump_v2_config import dump_v2_config + from mnist_v2 import network + + predict = network(is_infer=True) + dump_v2_config(predict, "trainer_config.bin", True) + ``` + + 对[手写数字识别](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/capi/examples/model_inference/dense)这个示例,[`mnist_v2.py`](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/capi/examples/model_inference/dense/mnist_v2.py)脚本集成了序列化神经网络结构的过程,可以直接运行 `python mnist_v2.py --task dump_config` 对神经网络结构进行序列化,结果会写入当前运行目录下的`trainer_config.bin`文件中。 + + 使用这种方式,需要**在运行时将神经网络的多个可学习参数放在同一个目录中**,C-API可以通过分别指定序列化后的网络结构文件和参数目录来加载训练好的模型。 + +2. 合并模型文件(可选) + + 一些情况为了便于发布,希望能够将序列化后的神经网络结构和训练好的模型参数打包进一个文件。对于这样的需求,可以使用`paddle.utils.merge_model`中的`merge_v2_model`接口对神经网络结构和训练好的参数进行序列化,将序列化结果写入一个文件内。 + + 代码示例如下: + + ```python + from paddle.utils.merge_model import merge_v2_modelss + from mnist_v2 import network + + net = network(is_infer=True) + param_file = "models/params_pass_4.tar" + output_file = "output.paddle.model" + merge_v2_model(net, param_file, output_file) + ``` + 对[手写数字识别](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/capi/examples/model_inference/dense)这个示例,可直接运行 `python` [merge_v2_model.py](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/capi/examples/model_inference/dense/merge_v2_model.py)。序列化结果会写入当前运行目录下的`output.paddle.model`文件中。使用这种方式,运行时C-API可以通过指定`output.paddle.model`文件的路径来加载预测模型。 + +#### 注意事项 +1. 为使用C-API,在调用`dump_v2_config`序列化神经网络结构时,参数`binary`必须指定为`True`。 +1. **预测使用的网络结构往往不同于训练**,通常需要去掉网络中的:(1)类别标签层;(2)损失函数层;(3)`evaluator`等,只留下核心计算层,请注意是否需要修改网络结构。 +1. 预测时,可以获取网络中定义的任意多个(大于等于一个)层前向计算的结果,需要哪些层的计算结果作为输出,就将这些层加入一个Python list中,作为调用`dump_v2_config`的第一个参数。 + +### 编写预测代码 + +预测代码更多详细示例代码请参考[C-API使用示例](https://github.com/PaddlePaddle/Paddle/tree/develop/paddle/capi/examples/model_inference) 目录下的代码示例。这一节对图1中预测代码编写的5个步骤进行介绍和说明。 + +#### step 1. 初始化PaddlePaddle运行环境 +第一步需调用[`paddle_init`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/main.h#L27) 初始化PaddlePaddle运行环境,该接口接受两个参数:参数的个数和参数列表。 + +#### step2. 加载模型 + +这里介绍C-API使用中的一个重要概念:Gradient Machine。 + +概念上,在 PaddlePaddle 内部,一个GradientMachine类的对象管理着一组计算层(PaddlePaddle Layers)来完成前向和反向计算,并处理与之相关的所有细节。在调用C-API预测时,只需进行前向计算而无需调用反向计算。这篇文档之后部分会使用`gradient machine`来特指调用PaddlePaddle C-API创建的GradientMachine类的对象。每一个 `gradient machine` 都会管理维护一份训练好的模型,下面是C-API提供的,两种常用的模型加载方式: + +1. 调用[`paddle_gradient_machine_load_parameter_from_disk`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/gradient_machine.h#L61)接口,从磁盘加载预测模型。这时`gradient machine`会独立拥有一份训练好的模型; +1. 调用[`paddle_gradient_machine_create_shared_param`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/gradient_machine.h#L88)接口,与其它`gradient machine`的共享已经加载的预测模型。这种情况多出现在使用多线程预测时,通过多个线程共享同一个模型来减少内存开销。可参考[此示例](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/examples/model_inference/multi_thread/main.c)。 + +- 注意事项 + 1. 使用PaddlePaddle V2 API训练,模型中所有可学习参数会被存为一个压缩文件,需要手动进行解压,将它们放在同一目录中,C-API不会直接加载 V2 API 存储的压缩文件。 + 1. 如果使用`merge model`方式将神经网络结构和训练好的参数序列化到一个文件,请参考此[示例](https://github.com/PaddlePaddle/Mobile/blob/develop/Demo/linux/paddle_image_recognizer.cpp#L59)。 + 1. 通过灵活使用以上两个接口,加载模型可其它多种方式,例如也可在程序运行过程中再加载另外一个模型。 + +#### step 3. 创建神经网络输入,组织输入数据 + +基本使用概念: +- 在PaddlePaddle内部,神经网络中一个计算层的输入输出被组织为一个 `Argument` 结构体,如果神经网络有多个输入或者多个输出,每一个输入/输出都会对应有自己的`Argument`。 +- `Argument` 并不真正“存储”数据,而是将输入/输出数据有机地组织在一起。 +- 在`Argument`内部由:1. `Matrix`(二维矩阵,存储浮点类型输入/输出);2. `IVector`(一维数组,**仅用于存储整型值**,多用于自然语言处理任务)来实际存储数据。 + +C-API支持的所有输入数据类型和他们的组织方式,请参考“输入/输出数据组织”一节。 + +这篇文档的之后部分会使用`argument`来特指PaddlePaddle C-API中神经网络的一个输入/输出,使用`paddle_matrix`**特指**`argument`中用于存储数据的`Matrix`类的对象。 + +在组织神经网络输入,获取输出时,需要思考完成以下工作: +1. 为每一个输入/输出创建`argument`; +1. 为每一个`argument`创建`paddle_matrix`来存储数据; + +与输入不同的是,不需在使用C-API时为输出`argument`的`paddle_matrix`对象分配空间。前向计算之后PaddlePaddle内部已经分配/管理了每个计算层输出的存储空间。 + +#### step 4. 前向计算 + +完成上述准备之后,通过调用 [`paddle_gradient_machine_forward`](https://github.com/PaddlePaddle/Paddle/blob/develop/paddle/capi/gradient_machine.h#L73) 接口完成神经网络的前向计算。 + +#### step 5. 清理 + +结束预测之后,对使用的中间变量和资源进行清理和释放。 diff --git a/paddle/capi/examples/model_inference/dense/main.c b/paddle/capi/examples/model_inference/dense/main.c index 5eeaf7e31fac7c9ed0b9269e74a7e467bde155ef..376cd46fb09a156d426453986c87dcff6e2f71dd 100644 --- a/paddle/capi/examples/model_inference/dense/main.c +++ b/paddle/capi/examples/model_inference/dense/main.c @@ -3,59 +3,82 @@ #include "../common/common.h" +// Modify this path as needed. #define CONFIG_BIN "./trainer_config.bin" +// Modify this path as needed. +// This demo assumes that merged model is not used, then this path is the +// directory storing all the trained parameters. +// If the model is trained by PaddlePaddle V2 API, the model is saved as +// a compressed file. You need to uncompress the compressed file first. +#define MODEL_PATH "models/pass_4" int main() { - // Initalize Paddle + // Initalize the PaddlePaddle runtime environment. char* argv[] = {"--use_gpu=False"}; CHECK(paddle_init(1, (char**)argv)); - // Reading config binary file. It is generated by `convert_protobin.sh` + // Read the binary configuration file generated by `convert_protobin.sh` long size; void* buf = read_config(CONFIG_BIN, &size); - // Create a gradient machine for inference. + // Create the gradient machine for inference. paddle_gradient_machine machine; CHECK(paddle_gradient_machine_create_for_inference(&machine, buf, (int)size)); - CHECK(paddle_gradient_machine_randomize_param(machine)); - // Loading parameter. Uncomment the following line and change the directory. - // CHECK(paddle_gradient_machine_load_parameter_from_disk(machine, - // "./some_where_to_params")); + // Load the trained model. Modify the parameter MODEL_PATH to set the correct + // path of the trained model. + CHECK(paddle_gradient_machine_load_parameter_from_disk(machine, MODEL_PATH)); + + // Inputs and outputs of the network are organized as paddle_arguments object + // in C-API. In the comments below, "argument" specifically means one input of + // the neural network in PaddlePaddle C-API. paddle_arguments in_args = paddle_arguments_create_none(); - // There is only one input of this network. + // There is only one data layer in this demo MNIST network, invoke this + // function to create one argument. CHECK(paddle_arguments_resize(in_args, 1)); - // Create input matrix. - paddle_matrix mat = paddle_matrix_create(/* sample_num */ 1, - /* size */ 784, - /* useGPU */ false); - srand(time(0)); + // Each argument needs one matrix or one ivector (integer vector, for sparse + // index input, usually used in NLP task) to holds the real input data. + // In the comments below, "matrix" specifically means the object needed by + // argument to hold the data. Here we create the matrix for the above created + // agument to store the testing samples. + paddle_matrix mat = + paddle_matrix_create(/* height = batch size */ 1, + /* width = dimensionality of the data layer */ 784, + /* whether to use GPU */ false); paddle_real* array; - - // Get First row. + // Get the pointer pointing to the start address of the first row of the + // created matrix. CHECK(paddle_matrix_get_row(mat, 0, &array)); + // Fill the matrix with a randomly generated test sample. + srand(time(0)); for (int i = 0; i < 784; ++i) { array[i] = rand() / ((float)RAND_MAX); } + // Assign the matrix to the argument. CHECK(paddle_arguments_set_value(in_args, 0, mat)); + // Create the output argument. paddle_arguments out_args = paddle_arguments_create_none(); + + // Invoke the forward computation. CHECK(paddle_gradient_machine_forward(machine, in_args, out_args, - /* isTrain */ false)); - paddle_matrix prob = paddle_matrix_create_none(); + /* is train taks or not */ false)); + // Create the matrix to hold the forward result of the neural network. + paddle_matrix prob = paddle_matrix_create_none(); + // Access the matrix of the output argument, the predicted result is stored in + // which. CHECK(paddle_arguments_get_value(out_args, 0, prob)); uint64_t height; uint64_t width; - CHECK(paddle_matrix_get_shape(prob, &height, &width)); CHECK(paddle_matrix_get_row(prob, 0, &array)); @@ -68,6 +91,7 @@ int main() { } printf("\n"); + // The cleaning up. CHECK(paddle_matrix_destroy(prob)); CHECK(paddle_arguments_destroy(out_args)); CHECK(paddle_matrix_destroy(mat)); diff --git a/paddle/capi/examples/model_inference/dense/merge_v2_model.py b/paddle/capi/examples/model_inference/dense/merge_v2_model.py new file mode 100644 index 0000000000000000000000000000000000000000..c030d572cbdb15cb5e90f2685723a81efb230f81 --- /dev/null +++ b/paddle/capi/examples/model_inference/dense/merge_v2_model.py @@ -0,0 +1,8 @@ +from paddle.utils.merge_model import merge_v2_model + +from mnist_v2 import network + +net = network(is_infer=True) +param_file = "models/params_pass_4.tar" +output_file = "output.paddle.model" +merge_v2_model(net, param_file, output_file) diff --git a/paddle/capi/examples/model_inference/dense/mnist_v2.py b/paddle/capi/examples/model_inference/dense/mnist_v2.py new file mode 100644 index 0000000000000000000000000000000000000000..ee28111153ca2cf24b9789452c65a0f4c7b64538 --- /dev/null +++ b/paddle/capi/examples/model_inference/dense/mnist_v2.py @@ -0,0 +1,117 @@ +import os +import sys +import gzip +import logging +import argparse +from PIL import Image +import numpy as np + +import paddle.v2 as paddle +from paddle.utils.dump_v2_config import dump_v2_config + +logger = logging.getLogger("paddle") +logger.setLevel(logging.INFO) + + +def multilayer_perceptron(img, layer_size, lbl_dim): + for idx, size in enumerate(layer_size): + hidden = paddle.layer.fc(input=(img if not idx else hidden), + size=size, + act=paddle.activation.Relu()) + return paddle.layer.fc(input=hidden, + size=lbl_dim, + act=paddle.activation.Softmax()) + + +def network(input_dim=784, lbl_dim=10, is_infer=False): + images = paddle.layer.data( + name='pixel', type=paddle.data_type.dense_vector(input_dim)) + + predict = multilayer_perceptron( + images, layer_size=[128, 64], lbl_dim=lbl_dim) + + if is_infer: + return predict + else: + label = paddle.layer.data( + name='label', type=paddle.data_type.integer_value(lbl_dim)) + return paddle.layer.classification_cost(input=predict, label=label) + + +def main(task="train", use_gpu=False, trainer_count=1, save_dir="models"): + if task == "train": + if not os.path.exists(save_dir): + os.mkdir(save_dir) + + paddle.init(use_gpu=use_gpu, trainer_count=trainer_count) + cost = network() + parameters = paddle.parameters.create(cost) + optimizer = paddle.optimizer.Momentum( + learning_rate=0.1 / 128.0, + momentum=0.9, + regularization=paddle.optimizer.L2Regularization(rate=0.0005 * 128)) + + trainer = paddle.trainer.SGD(cost=cost, + parameters=parameters, + update_equation=optimizer) + + def event_handler(event): + if isinstance(event, paddle.event.EndIteration): + if event.batch_id % 100 == 0: + logger.info("Pass %d, Batch %d, Cost %f, %s" % + (event.pass_id, event.batch_id, event.cost, + event.metrics)) + if isinstance(event, paddle.event.EndPass): + with gzip.open( + os.path.join(save_dir, "params_pass_%d.tar" % + event.pass_id), "w") as f: + trainer.save_parameter_to_tar(f) + + trainer.train( + reader=paddle.batch( + paddle.reader.shuffle( + paddle.dataset.mnist.train(), buf_size=8192), + batch_size=128), + event_handler=event_handler, + num_passes=5) + elif task == "dump_config": + predict = network(is_infer=True) + dump_v2_config(predict, "trainer_config.bin", True) + else: + raise RuntimeError(("Error value for parameter task. " + "Available options are: train and dump_config.")) + + +def parse_cmd(): + parser = argparse.ArgumentParser( + description="PaddlePaddle MNIST demo for CAPI.") + parser.add_argument( + "--task", + type=str, + required=False, + help=("A string indicating the taks type. " + "Available options are: \"train\", \"dump_config\"."), + default="train") + parser.add_argument( + "--use_gpu", + type=bool, + help=("A bool flag indicating whether to use GPU device or not."), + default=False) + parser.add_argument( + "--trainer_count", + type=int, + help=("This parameter is only used in training task. It indicates " + "how many computing threads are created in training."), + default=1) + parser.add_argument( + "--save_dir", + type=str, + help=("This parameter is only used in training task. It indicates " + "path of the directory to save the trained models."), + default="models") + return parser.parse_args() + + +if __name__ == "__main__": + args = parse_cmd() + main(args.task, args.use_gpu, args.trainer_count, args.save_dir) diff --git a/paddle/capi/examples/model_inference/sparse_binary/main.c b/paddle/capi/examples/model_inference/sparse_binary/main.c index 8ba67aee560239d3050c7f40198d20df99ec370e..029b94ee63ba282aa48193ffd4f625657ddc3a60 100644 --- a/paddle/capi/examples/model_inference/sparse_binary/main.c +++ b/paddle/capi/examples/model_inference/sparse_binary/main.c @@ -1,5 +1,6 @@ #include #include + #include "../common/common.h" #define CONFIG_BIN "./trainer_config.bin" @@ -9,16 +10,18 @@ int main() { char* argv[] = {"--use_gpu=False"}; CHECK(paddle_init(1, (char**)argv)); - // Reading config binary file. It is generated by `convert_protobin.sh` + // Read the binary configuration file which is generated by + // `convert_protobin.sh` long size; void* buf = read_config(CONFIG_BIN, &size); - // Create a gradient machine for inference. + // Create the gradient machine for inference. paddle_gradient_machine machine; CHECK(paddle_gradient_machine_create_for_inference(&machine, buf, (int)size)); CHECK(paddle_gradient_machine_randomize_param(machine)); - // Loading parameter. Uncomment the following line and change the directory. + // Load the trained parameters. Uncomment the following line and change the + // directory as needed. // CHECK(paddle_gradient_machine_load_parameter_from_disk(machine, // "./some_where_to_params")); paddle_arguments in_args = paddle_arguments_create_none(); @@ -26,7 +29,7 @@ int main() { // There is only one input of this network. CHECK(paddle_arguments_resize(in_args, 1)); - // Create input matrix. + // Create the input matrix. paddle_matrix mat = paddle_matrix_create_sparse(1, 784, 3, true, false); srand(time(0)); paddle_real* array; diff --git a/paddle/framework/CMakeLists.txt b/paddle/framework/CMakeLists.txt index af4079875a50ffe6eb627492f834fb601bbee716..597ea959f230d88350796cef05b7d6f2a42e594a 100644 --- a/paddle/framework/CMakeLists.txt +++ b/paddle/framework/CMakeLists.txt @@ -32,10 +32,12 @@ cc_test(threadpool_test SRCS threadpool_test.cc DEPS threadpool) cc_library(scope SRCS scope.cc DEPS glog threadpool) cc_test(scope_test SRCS scope_test.cc DEPS scope) -cc_library(device_data_transform SRCS device_data_transform.cc DEPS tensor) +cc_library(data_device_transform SRCS data_device_transform.cc DEPS tensor) +cc_library(data_type_transform SRCS data_type_transform.cc DEPS tensor) +cc_library(data_layout_transform SRCS data_layout_transform.cc DEPS tensor math_function) -cc_library(data_transform SRCS data_transform.cc DEPS math_function tensor framework_proto selected_rows device_data_transform) -cc_test(data_transform_test SRCS data_transform_test.cc DEPS data_transform device_context) +cc_library(data_transform SRCS data_transform.cc DEPS math_function tensor + framework_proto selected_rows data_device_transform data_type_transform data_layout_transform) cc_library(attribute SRCS attribute.cc DEPS framework_proto) cc_test(program_desc_test SRCS program_desc_test.cc DEPS proto_desc @@ -45,7 +47,7 @@ cc_test(op_proto_maker_test SRCS op_proto_maker_test.cc DEPS op_proto_maker) cc_library(op_info SRCS op_info.cc DEPS attribute framework_proto) cc_library(shape_inference SRCS shape_inference.cc DEPS ddim attribute device_context) cc_library(operator SRCS operator.cc DEPS op_info device_context tensor scope glog - shape_inference data_transform) + shape_inference data_transform lod_tensor) cc_test(operator_test SRCS operator_test.cc DEPS operator op_registry init) cc_library(proto_desc SRCS var_desc.cc op_desc.cc block_desc.cc program_desc.cc DEPS shape_inference op_info operator glog) @@ -80,5 +82,5 @@ cc_test(init_test SRCS init_test.cc DEPS init) cc_test(op_kernel_type_test SRCS op_kernel_type_test.cc DEPS place device_context framework_proto) cc_test(cow_ptr_tests SRCS details/cow_ptr_test.cc) -nv_test(device_data_transform_test SRCS device_data_transform_test.cu +nv_test(data_device_transform_test SRCS data_device_transform_test.cu DEPS operator op_registry init math_function) diff --git a/paddle/framework/device_data_transform.cc b/paddle/framework/data_device_transform.cc similarity index 89% rename from paddle/framework/device_data_transform.cc rename to paddle/framework/data_device_transform.cc index cd5104cc6f287315ed9d22aa2ec6414f7204d214..d38d87927fc7ee0aa32eabff5cf83d7c4ca7b2b0 100644 --- a/paddle/framework/device_data_transform.cc +++ b/paddle/framework/data_device_transform.cc @@ -11,7 +11,7 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */ -#include "paddle/framework/device_data_transform.h" +#include "paddle/framework/data_device_transform.h" namespace paddle { namespace framework { @@ -31,15 +31,14 @@ static const platform::DeviceContext* GetDeviceContext( } } -Tensor* DeviceTransform(const Tensor& in, const platform::Place& dst_place) { +void DeviceTransform(const Tensor& in, const platform::Place& dst_place, + Tensor* out) { VLOG(3) << "DeviceTransform in, src_place " << in.place() << " dst_place: " << dst_place; - Tensor* out = new Tensor(); auto* dev_ctx = GetDeviceContext(in.place(), dst_place); dev_ctx->Wait(); Copy(in, dst_place, *dev_ctx, out); dev_ctx->Wait(); - return out; } } // namespace framework diff --git a/paddle/framework/device_data_transform.h b/paddle/framework/data_device_transform.h similarity index 88% rename from paddle/framework/device_data_transform.h rename to paddle/framework/data_device_transform.h index bebf0d1b320183f46ab226dc6493ba09a365fc35..b21ed0be34ad868ae4a404e913e9623db308b530 100644 --- a/paddle/framework/device_data_transform.h +++ b/paddle/framework/data_device_transform.h @@ -21,7 +21,8 @@ limitations under the License. */ namespace paddle { namespace framework { -Tensor* DeviceTransform(const Tensor& in, const platform::Place& dst_place); +void DeviceTransform(const Tensor& in, const platform::Place& dst_place, + Tensor* out); } // namespace framework } // namespace paddle diff --git a/paddle/framework/device_data_transform_test.cu b/paddle/framework/data_device_transform_test.cu similarity index 100% rename from paddle/framework/device_data_transform_test.cu rename to paddle/framework/data_device_transform_test.cu diff --git a/paddle/framework/data_layout.h b/paddle/framework/data_layout.h index 4a8669c3a41fceaad26878a79eabfd0affce86fd..31817251ed09a7a1da7223c1e99b2eb369a3de30 100644 --- a/paddle/framework/data_layout.h +++ b/paddle/framework/data_layout.h @@ -13,9 +13,10 @@ See the License for the specific language governing permissions and limitations under the License. */ #pragma once -#include "paddle/platform/enforce.h" -#include +#include +#include + #include "paddle/platform/enforce.h" namespace paddle { @@ -28,12 +29,19 @@ enum class DataLayout { }; inline DataLayout StringToDataLayout(const std::string& str) { - if (str == "NHWC" || str == "nhwc") { + std::string s(str); + for (size_t i = 0; i < s.size(); ++i) { + s[i] = toupper(s[i]); + } + + if (s == "NHWC") { return DataLayout::kNHWC; - } else if (str == "NCHW" || str == "nchw") { + } else if (s == "NCHW") { return DataLayout::kNCHW; + } else if (s == "ANYLAYOUT") { + return DataLayout::kAnyLayout; } else { - PADDLE_THROW("Unknown storage order string: %s", str); + PADDLE_THROW("Unknown storage order string: %s", s); } } @@ -50,7 +58,7 @@ inline std::string DataLayoutToString(const DataLayout& data_layout) { } } -inline std::ostream& operator<<(std::ostream& out, DataLayout l) { +inline std::ostream& operator<<(std::ostream& out, const DataLayout& l) { out << DataLayoutToString(l); return out; } diff --git a/paddle/framework/data_layout_transform.cc b/paddle/framework/data_layout_transform.cc new file mode 100644 index 0000000000000000000000000000000000000000..96794cae97d460e86fe83ac1395e1dfc7e371e3b --- /dev/null +++ b/paddle/framework/data_layout_transform.cc @@ -0,0 +1,82 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include "paddle/framework/data_layout_transform.h" + +#include "paddle/framework/tensor.h" +#include "paddle/operators/math/math_function.h" + +namespace paddle { +namespace framework { + +struct CastDataLayout { + CastDataLayout(const platform::DeviceContext* ctx, + const std::vector& axis, const framework::Tensor& in, + framework::Tensor* out) + : in_(in), out_(out), ctx_(ctx), axis_(axis) {} + const framework::Tensor in_; + framework::Tensor* out_; + const platform::DeviceContext* ctx_; + const std::vector axis_; + + template + void operator()() { + auto place = ctx_->GetPlace(); + + if (platform::is_cpu_place(place)) { + operators::math::Transpose trans4; + auto* context = static_cast(ctx_); + trans4(*context, in_, out_, axis_); + } else { + PADDLE_THROW("Unsupport CPU <-> GPU!"); + } + } +}; + +void TransDataLayout(const std::vector& axis, + const platform::DeviceContext* ctx, + const KernelTypePair& kernel_pair, const Variable& in, + Variable* out) { + PADDLE_ENFORCE(in.IsType(), "Only support Tensor transform!."); + PADDLE_ENFORCE( + platform::places_are_same_class(kernel_pair.first.place_, + kernel_pair.second.place_), + "TransDataLayout only support DataLayout transform on same place!"); + PADDLE_ENFORCE(kernel_pair.first.data_type_ == kernel_pair.second.data_type_, + "TransDataLayout only support Datatype are same!"); + + auto src = in.Get(); + auto* dst = out->GetMutable(); + PADDLE_ENFORCE(arity(src.dims()) == 4, "Input Arity Only Suppport 4!"); + + auto src_dim = src.dims(); + std::vector dst_dim; + + dst_dim.resize(axis.size()); + for (size_t i = 0; i < axis.size(); i++) { + dst_dim[i] = src_dim[axis[i]]; + } + + dst->Resize(make_ddim(dst_dim)); + auto place = kernel_pair.second.place_; + dst->mutable_data(place, src.type()); + + auto src_type = kernel_pair.first.data_type_; + framework::VisitDataType(src_type, CastDataLayout(ctx, axis, src, dst)); + + dst->set_layout(kernel_pair.second.data_layout_); +} + +} // namespace framework +} // namespace paddle diff --git a/paddle/framework/data_layout_transform.h b/paddle/framework/data_layout_transform.h new file mode 100644 index 0000000000000000000000000000000000000000..befae1f63616a4c21d998c6b784b8ef288d00617 --- /dev/null +++ b/paddle/framework/data_layout_transform.h @@ -0,0 +1,31 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#pragma once + +#include "paddle/framework/op_kernel_type.h" +#include "paddle/framework/variable.h" + +namespace paddle { +namespace framework { + +using KernelTypePair = std::pair; + +void TransDataLayout(const std::vector& axis, + const platform::DeviceContext* ctx, + const KernelTypePair& kernel_pair, const Variable& in, + Variable* out); + +} // namespace framework +} // namespace paddle diff --git a/paddle/framework/data_transform.cc b/paddle/framework/data_transform.cc index fed958db1584c4fda5394d59a2ef8936045a9ce9..d826f0edace6d5afee5cd83f6e65d6dbaefae874 100644 --- a/paddle/framework/data_transform.cc +++ b/paddle/framework/data_transform.cc @@ -11,32 +11,22 @@ distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */ -#include #include "paddle/framework/data_transform.h" -#include "paddle/framework/device_data_transform.h" -#include "paddle/framework/lod_tensor.h" -#include "paddle/framework/selected_rows.h" -#include "paddle/platform/device_context.h" + +#include "paddle/framework/data_device_transform.h" namespace paddle { namespace framework { -DataTransformFnMap& DataTransformFnMap::Instance() { - static DataTransformFnMap data_transform_map; - return data_transform_map; -} - -Tensor* DataTransform(const OpKernelType& expected_kernel_type, - const OpKernelType& kernel_type_for_var, - const Tensor& input_tensor) { - Tensor* out = nullptr; +void DataTransform(const OpKernelType& expected_kernel_type, + const OpKernelType& kernel_type_for_var, + const Tensor& input_tensor, Tensor* out) { if (!platform::is_same_place(kernel_type_for_var.place_, expected_kernel_type.place_)) { - out = DeviceTransform(input_tensor, expected_kernel_type.place_); + DeviceTransform(input_tensor, expected_kernel_type.place_, out); } PADDLE_ENFORCE_NOT_NULL(out, "out should not be null"); - return out; } void CopyVariableWithTensor(const Variable& in_var, const Tensor& tensor, @@ -58,134 +48,5 @@ void CopyVariableWithTensor(const Variable& in_var, const Tensor& tensor, } } -auto KernelFP32 = OpKernelType(proto::DataType::FP32, platform::CPUPlace(), - DataLayout::kNHWC, LibraryType::kPlain); - -auto KernelFP64 = OpKernelType(proto::DataType::FP64, platform::CPUPlace(), - DataLayout::kNHWC, LibraryType::kPlain); - -auto KernelNHWC = OpKernelType(proto::DataType::FP64, platform::CPUPlace(), - DataLayout::kNHWC, LibraryType::kPlain); - -auto KernelNCHW = OpKernelType(proto::DataType::FP64, platform::CPUPlace(), - DataLayout::kNCHW, LibraryType::kPlain); - -// TODO(dzhwinter): Only for testing multiple op kernel. -// Dummy transform function for library_type -// should be removed. -auto KernelPlain = OpKernelType(proto::DataType::FP32, platform::CUDAPlace(0), - DataLayout::kAnyLayout, LibraryType::kPlain); - -auto KernelCUDNN = OpKernelType(proto::DataType::FP32, platform::CUDAPlace(0), - DataLayout::kAnyLayout, LibraryType::kCUDNN); - -void DummyTrans(const platform::DeviceContext* ctx, - const KernelTypePair& kernel_pair, const Variable& in, - Variable* out) { - PADDLE_ENFORCE(in.IsType(), "Only Support Tensor transform!."); - PADDLE_ENFORCE( - platform::places_are_same_class(kernel_pair.first.place_, - kernel_pair.second.place_), - "TransDataType Only Support DataType transform on same place!"); - auto src = in.Get(); - auto* dst = out->GetMutable(); - *dst = src; -} - -void TransDataType(const platform::DeviceContext* ctx, - const KernelTypePair& kernel_pair, const Variable& in, - Variable* out) { - PADDLE_ENFORCE(in.IsType(), "Only Support Tensor transform!."); - PADDLE_ENFORCE( - platform::places_are_same_class(kernel_pair.first.place_, - kernel_pair.second.place_), - "TransDataType Only Support DataType transform on same place!"); - - auto src = in.Get(); - auto* dst = out->GetMutable(); - - auto dims = src.dims(); - dst->Resize(dims); - auto dst_type = kernel_pair.second.data_type_; - auto src_type = kernel_pair.first.data_type_; - - switch (src_type) { - case proto::DataType::FP32: - framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); - break; - case proto::DataType::FP64: - framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); - break; - case proto::DataType::INT32: - framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); - break; - case proto::DataType::INT64: - framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); - break; - case proto::DataType::BOOL: - framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); - break; - default: - PADDLE_THROW("Not support type %d", src_type); - } -} - -void TransDataLayout(const std::vector& axis, - const platform::DeviceContext* ctx, - const KernelTypePair& kernel_pair, const Variable& in, - Variable* out) { - PADDLE_ENFORCE(in.IsType(), "Only support Tensor transform!."); - PADDLE_ENFORCE( - platform::places_are_same_class(kernel_pair.first.place_, - kernel_pair.second.place_), - "TransDataLayout only support DataLayout transform on same place!"); - PADDLE_ENFORCE(kernel_pair.first.data_type_ == kernel_pair.second.data_type_, - "TransDataLayout only support Datatype are same!"); - - auto src = in.Get(); - auto* dst = out->GetMutable(); - PADDLE_ENFORCE(arity(src.dims()) == 4, "Input Arity Only Suppport 4!"); - - auto src_dim = src.dims(); - std::vector dst_dim; - - dst_dim.resize(axis.size()); - for (size_t i = 0; i < axis.size(); i++) { - dst_dim[i] = src_dim[axis[i]]; - } - - dst->Resize(make_ddim(dst_dim)); - auto place = kernel_pair.second.place_; - dst->mutable_data(place, src.type()); - - auto src_type = kernel_pair.first.data_type_; - framework::VisitDataType(src_type, CastDataLayout(ctx, axis, src, dst)); - - dst->set_layout(kernel_pair.second.data_layout_); -} - } // namespace framework } // namespace paddle - -namespace f = paddle::framework; - -namespace { -std::vector NHWC2NCHW = {0, 3, 1, 2}; -std::vector NCHW2NHWC = {0, 2, 3, 1}; -} - -REGISTER_DATA_TRANSFORM_FN(f::KernelFP32, f::KernelFP64, f::TransDataType); -REGISTER_DATA_TRANSFORM_FN(f::KernelPlain, f::KernelCUDNN, f::DummyTrans); -REGISTER_DATA_TRANSFORM_FN(f::KernelCUDNN, f::KernelPlain, f::DummyTrans); -REGISTER_DATA_TRANSFORM_FN(f::KernelNHWC, f::KernelNCHW, - std::bind(f::TransDataLayout, NHWC2NCHW, - std::placeholders::_1, - std::placeholders::_2, - std::placeholders::_3, - std::placeholders::_4)); -REGISTER_DATA_TRANSFORM_FN(f::KernelNCHW, f::KernelNHWC, - std::bind(f::TransDataLayout, NCHW2NHWC, - std::placeholders::_1, - std::placeholders::_2, - std::placeholders::_3, - std::placeholders::_4)); diff --git a/paddle/framework/data_transform.h b/paddle/framework/data_transform.h index e4e5c30a96a3c985ae2ecd494b723c8afeceb12f..a4b78902379d5eb89f92ec47655ff93b49d0bfab 100644 --- a/paddle/framework/data_transform.h +++ b/paddle/framework/data_transform.h @@ -30,152 +30,12 @@ limitations under the License. */ namespace paddle { namespace framework { -using KernelTypePair = std::pair; - -using DataTransformFn = - std::function; - -struct KernelTypePairHash { - static void HashCombine(const OpKernelType& t, std::size_t* seed) { - OpKernelType::Hash kernel_type_hasher; - (*seed) ^= kernel_type_hasher(t) + 0x9e3779b9 + (*seed << 6) + (*seed >> 2); - } - - size_t operator()(const KernelTypePair& kernel_pair) const { - std::size_t seed = 0; - HashCombine(kernel_pair.first, &seed); - HashCombine(kernel_pair.second, &seed); - return seed; - } -}; - -Tensor* DataTransform(const OpKernelType& expected_kernel_type, - const OpKernelType& kernel_type_for_var, - const Tensor& input_tensor); +void DataTransform(const OpKernelType& expected_kernel_type, + const OpKernelType& kernel_type_for_var, + const Tensor& input_tensor, Tensor* out); void CopyVariableWithTensor(const Variable& in_var, const Tensor& tensor, Variable& out_var); -template -struct CastDataTypeFunctor { - HOSTDEVICE inline OutType operator()(InType in) const { - return static_cast(in); - } -}; - -template -struct CastDataType { - CastDataType(const framework::Tensor& in, framework::Tensor* out, - const platform::DeviceContext* ctx) - : in_(in), out_(out), ctx_(ctx) {} - const framework::Tensor in_; - framework::Tensor* out_; - const platform::DeviceContext* ctx_; - - template - void operator()() { - auto place = ctx_->GetPlace(); - - auto* in_begin = in_.data(); - auto numel = in_.numel(); - auto* in_end = in_begin + numel; - auto* out_begin = out_->mutable_data(place); - - if (platform::is_cpu_place(place)) { - platform::Transform trans; - auto* context = static_cast(ctx_); - trans(*context, in_begin, in_end, out_begin, - CastDataTypeFunctor()); - } else { - // TODO(dzhwinter): enhance Copy CPU<->GPU with different data type? - PADDLE_THROW("Unsupport CPU <-> GPU!"); - } - } -}; - -struct CastDataLayout { - CastDataLayout(const platform::DeviceContext* ctx, - const std::vector& axis, const framework::Tensor& in, - framework::Tensor* out) - : in_(in), out_(out), ctx_(ctx), axis_(axis) {} - const framework::Tensor in_; - framework::Tensor* out_; - const platform::DeviceContext* ctx_; - const std::vector axis_; - - template - void operator()() { - auto place = ctx_->GetPlace(); - - if (platform::is_cpu_place(place)) { - operators::math::Transpose trans4; - auto* context = static_cast(ctx_); - trans4(*context, in_, out_, axis_); - } else { - PADDLE_THROW("Unsupport CPU <-> GPU!"); - } - } -}; - -using DataTransformMap = - std::unordered_map; - -class DataTransformFnMap { - public: - static DataTransformFnMap& Instance(); - - bool Has(const KernelTypePair& key_pair) const { - return map_.find(key_pair) != map_.end(); - } - - void Insert(const OpKernelType& left, const OpKernelType& right, - const DataTransformFn& data_tranform_fn) { - Insert(std::make_pair(left, right), data_tranform_fn); - } - - void Insert(const KernelTypePair& kernel_type_pair, - const DataTransformFn& data_tranform_fn) { - PADDLE_ENFORCE(!Has(kernel_type_pair), - "KernelTypePair %s has been registered", ""); - map_.insert({kernel_type_pair, data_tranform_fn}); - } - - const DataTransformFn& Get(const KernelTypePair& key_pair) const { - auto data_transformer = GetNullable(key_pair); - PADDLE_ENFORCE_NOT_NULL(data_transformer, - "DataTransformFn should not be NULL"); - return *data_transformer; - } - - const DataTransformFn* GetNullable(const KernelTypePair& key_pair) const { - auto it = map_.find(key_pair); - if (it == map_.end()) { - return nullptr; - } else { - return &(it->second); - } - } - - const DataTransformMap& Map() const { return map_; } - - private: - DataTransformFnMap() = default; - DataTransformMap map_; - DISABLE_COPY_AND_ASSIGN(DataTransformFnMap); -}; - -// generate unique name with __LINE__ -// refs https://stackoverflow.com/questions/1597007 -#define TOKENPASTE(x, y) x##y -#define TOKENPASTE2(x, y) TOKENPASTE(x, y) -#define REGISTER_DATA_TRANSFORM_FN(from, to, fn) \ - static int TOKENPASTE2(fn_, __LINE__)() { \ - ::paddle::framework::DataTransformFnMap::Instance().Insert(from, to, fn); \ - return 0; \ - } \ - static int TOKENPASTE2(var_, __LINE__) __attribute__((unused)) = \ - TOKENPASTE2(fn_, __LINE__)() - } // namespace framework } // namespace paddle diff --git a/paddle/framework/data_transform_test.cc b/paddle/framework/data_transform_test.cc deleted file mode 100644 index edd305fd17ae202926b83fbec10089719baa2e16..0000000000000000000000000000000000000000 --- a/paddle/framework/data_transform_test.cc +++ /dev/null @@ -1,168 +0,0 @@ -/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. - -Licensed under the Apache License, Version 2.0 (the "License"); -you may not use this file except in compliance with the License. -You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - -Unless required by applicable law or agreed to in writing, software -distributed under the License is distributed on an "AS IS" BASIS, -WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -See the License for the specific language governing permissions and -limitations under the License. */ -#include -#include - -#include - -#include "paddle/framework/data_transform.h" -#include "paddle/platform/device_context.h" - -namespace paddle { -namespace framework { -using namespace platform; - -/** - * @brief cross validation of different kernel type transform - * We use four bit map represent different combination. - * If the field has multiple possible value, only choose two of them. - * For DataType, only test the FP32(float), FP64(double). - * e.g. 0000 -> FP32, CPUPlace, kNHWC, kPlain - * 1111 -> FP64, GPUPlace, kNCHW, kMKLDNN - */ - -std::array kDataType = { - {proto::DataType::FP32, proto::DataType::FP64}}; - -std::array kPlace = {{CPUPlace(), CUDAPlace(0)}}; - -std::array kDataLayout = {{ - DataLayout::kNHWC, DataLayout::kNCHW, -}}; - -std::array kLibraryType = {{ - LibraryType::kPlain, LibraryType::kMKLDNN, -}}; - -OpKernelType GenFromBit(const std::vector bits) { - return OpKernelType(kDataType[bits[0]], kPlace[bits[1]], kDataLayout[bits[2]], - kLibraryType[bits[3]]); -} - -int test_value = 0; - -auto kernel0 = GenFromBit({0, 0, 0, 0}); -auto kernel1 = GenFromBit({0, 0, 0, 1}); -auto kernel2 = GenFromBit({0, 0, 1, 0}); -auto kernel3 = GenFromBit({0, 0, 1, 1}); - -void TransDataType_t(const platform::DeviceContext* ctx, - const KernelTypePair& p, const Variable& in, - Variable* out) { - test_value++; -} - -void TransDataLayout_t(const platform::DeviceContext* ctx, - const KernelTypePair& p, const Variable& in, - Variable* out) { - test_value--; -} - -void TransLibraryType_t(const platform::DeviceContext* ctx, - const KernelTypePair& p, const Variable& in, - Variable* out) { - test_value += 2; -} - -} // namespace framework -} // namespace paddle - -namespace frw = paddle::framework; - -REGISTER_DATA_TRANSFORM_FN(frw::kernel0, frw::kernel1, frw::TransDataType_t); -REGISTER_DATA_TRANSFORM_FN(frw::kernel1, frw::kernel2, frw::TransDataLayout_t); -REGISTER_DATA_TRANSFORM_FN(frw::kernel0, frw::kernel2, frw::TransLibraryType_t); - -TEST(DataTransform, Register) { - using namespace paddle::framework; - using namespace paddle::platform; - - auto& instance = DataTransformFnMap::Instance(); - paddle::framework::Variable in; - paddle::framework::Variable out; - - DeviceContext* ctx = new CPUDeviceContext(); - auto pair0 = std::make_pair(frw::kernel0, frw::kernel1); - instance.Get(pair0)(ctx, pair0, in, &out); - ASSERT_EQ(test_value, 1); - - auto pair1 = std::make_pair(frw::kernel1, frw::kernel2); - instance.Get(pair1)(ctx, pair1, in, &out); - ASSERT_EQ(test_value, 0); - - auto pair3 = std::make_pair(frw::kernel0, frw::kernel2); - instance.Get(pair3)(ctx, pair3, in, &out); - ASSERT_EQ(test_value, 2); -} - -TEST(DataTransform, DataLayout) { - using namespace paddle::framework; - using namespace paddle::platform; - - auto& instance = DataTransformFnMap::Instance(); - Variable in; - Variable out; - Tensor* src = in.GetMutable(); - src->mutable_data(make_ddim({2, 3, 1, 2}), CPUPlace()); - src->set_layout(DataLayout::kNHWC); - - DeviceContext* ctx = new CPUDeviceContext(); - - { - auto kernel1 = GenFromBit({1, 0, 0, 0}); - auto kernel2 = GenFromBit({1, 0, 1, 0}); - auto pair0 = std::make_pair(kernel1, kernel2); - instance.Get(pair0)(ctx, pair0, in, &out); - } - - Tensor dst = out.Get(); - - EXPECT_TRUE(dst.layout() == DataLayout::kNCHW); - EXPECT_TRUE(dst.dims() == make_ddim({2, 2, 3, 1})); - - { - auto kernel1 = GenFromBit({1, 0, 1, 0}); - auto kernel2 = GenFromBit({1, 0, 0, 0}); - auto pair0 = std::make_pair(kernel1, kernel2); - instance.Get(pair0)(ctx, pair0, out, &in); - } - - EXPECT_TRUE(src->layout() == DataLayout::kNHWC); - EXPECT_TRUE(src->dims() == make_ddim({2, 3, 1, 2})); -} - -TEST(DataTransform, DataType) { - using namespace paddle::framework; - using namespace paddle::platform; - - auto& instance = DataTransformFnMap::Instance(); - DeviceContext* ctx = new CPUDeviceContext(); - - Variable in; - Variable out; - Tensor* src = in.GetMutable(); - float* ptr = src->mutable_data(make_ddim({2, 3}), CPUPlace()); - for (int i = 0; i < 6; ++i) { - ptr[i] = i / 3; - } - - { - auto kernel1 = GenFromBit({0, 0, 0, 0}); - auto kernel2 = GenFromBit({1, 0, 0, 0}); - auto pair0 = std::make_pair(kernel1, kernel2); - instance.Get(pair0)(ctx, pair0, in, &out); - } - Tensor dst = out.Get(); - EXPECT_TRUE(dst.data() != nullptr); -} diff --git a/paddle/framework/data_type_transform.cc b/paddle/framework/data_type_transform.cc new file mode 100644 index 0000000000000000000000000000000000000000..63373232e910d44eb0996f9280f9c166ad092030 --- /dev/null +++ b/paddle/framework/data_type_transform.cc @@ -0,0 +1,99 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include "paddle/framework/data_type_transform.h" + +#include "paddle/framework/selected_rows.h" +#include "paddle/platform/transform.h" + +namespace paddle { +namespace framework { + +template +struct CastDataTypeFunctor { + HOSTDEVICE inline OutType operator()(InType in) const { + return static_cast(in); + } +}; + +template +struct CastDataType { + CastDataType(const framework::Tensor& in, framework::Tensor* out, + const platform::DeviceContext* ctx) + : in_(in), out_(out), ctx_(ctx) {} + const framework::Tensor in_; + framework::Tensor* out_; + const platform::DeviceContext* ctx_; + + template + void operator()() { + auto place = ctx_->GetPlace(); + + auto* in_begin = in_.data(); + auto numel = in_.numel(); + auto* in_end = in_begin + numel; + auto* out_begin = out_->mutable_data(place); + + if (platform::is_cpu_place(place)) { + platform::Transform trans; + auto* context = static_cast(ctx_); + trans(*context, in_begin, in_end, out_begin, + CastDataTypeFunctor()); + } else { + // TODO(dzhwinter): enhance Copy CPU<->GPU with different data type? + PADDLE_THROW("Unsupport CPU <-> GPU!"); + } + } +}; + +void TransDataType(const platform::DeviceContext* ctx, + const KernelTypePair& kernel_pair, const Variable& in, + Variable* out) { + PADDLE_ENFORCE(in.IsType(), "Only Support Tensor transform!."); + PADDLE_ENFORCE( + platform::places_are_same_class(kernel_pair.first.place_, + kernel_pair.second.place_), + "TransDataType Only Support DataType transform on same place!"); + + auto src = in.Get(); + auto* dst = out->GetMutable(); + + auto dims = src.dims(); + dst->Resize(dims); + auto dst_type = kernel_pair.second.data_type_; + auto src_type = kernel_pair.first.data_type_; + + switch (src_type) { + case proto::DataType::FP32: + framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); + break; + case proto::DataType::FP64: + framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); + break; + case proto::DataType::INT32: + framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); + break; + case proto::DataType::INT64: + framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); + break; + case proto::DataType::BOOL: + framework::VisitDataType(dst_type, CastDataType(src, dst, ctx)); + break; + default: + PADDLE_THROW("Not support type %d", src_type); + } +} + +} // namespace framework +} // namespace paddle diff --git a/paddle/framework/data_type_transform.h b/paddle/framework/data_type_transform.h new file mode 100644 index 0000000000000000000000000000000000000000..8ec90742256c2308a242d993838e46e51a6fc167 --- /dev/null +++ b/paddle/framework/data_type_transform.h @@ -0,0 +1,31 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#pragma once + +#include "paddle/framework/op_kernel_type.h" +#include "paddle/framework/variable.h" +#include "paddle/platform/device_context.h" + +namespace paddle { +namespace framework { + +using KernelTypePair = std::pair; + +void TransDataType(const platform::DeviceContext* ctx, + const KernelTypePair& kernel_pair, const Variable& in, + Variable* out); + +} // namespace framework +} // namespace paddle diff --git a/paddle/framework/grad_op_desc_maker.h b/paddle/framework/grad_op_desc_maker.h index 2de5242831835b47893a5825e5532500ad5ec3f9..2082f8bb76fb62bc36f033fecbd4eaa76d12d949 100644 --- a/paddle/framework/grad_op_desc_maker.h +++ b/paddle/framework/grad_op_desc_maker.h @@ -87,7 +87,11 @@ class GradOpDescMakerBase { auto onames = this->Output(name); ret_val.reserve(onames.size()); std::transform(onames.begin(), onames.end(), std::back_inserter(ret_val), - GradVarName); + [this](const std::string& fwd_var_name) -> std::string { + auto g_name = GradVarName(fwd_var_name); + (*this->grad_to_var_)[g_name] = fwd_var_name; + return g_name; + }); return ret_val; } diff --git a/paddle/framework/init.cc b/paddle/framework/init.cc index e12bac1d78e3f6bbc46849c06b53e3b93e147cfc..4ef82a541efaa35bcf831d5122570154f2fa2423 100644 --- a/paddle/framework/init.cc +++ b/paddle/framework/init.cc @@ -11,6 +11,7 @@ distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */ +#include // for strdup #include #include @@ -60,7 +61,9 @@ void InitDevices() { } void InitGLOG(const std::string &prog_name) { - google::InitGoogleLogging(prog_name.c_str()); + // glog will not hold the ARGV[0] inside. + // Use strdup to alloc a new string. + google::InitGoogleLogging(strdup(prog_name.c_str())); google::InstallFailureSignalHandler(); } diff --git a/paddle/framework/lod_tensor.cc b/paddle/framework/lod_tensor.cc index 506fde440533e83f093f26484f925416b89c75a0..87a57d095141cc456af2cbabbc227715a02375e9 100644 --- a/paddle/framework/lod_tensor.cc +++ b/paddle/framework/lod_tensor.cc @@ -44,9 +44,19 @@ std::ostream &operator<<(std::ostream &os, const LoD &lod) { } std::ostream &operator<<(std::ostream &os, const LoDTensor &t) { - PADDLE_ENFORCE(platform::is_cpu_place(t.place())); PADDLE_ENFORCE(t.type().hash_code() == typeid(float).hash_code()); + if (!platform::is_cpu_place(t.place())) { + LoDTensor tt; + framework::Copy(t, platform::CPUPlace(), &tt); + platform::DeviceContextPool &pool = platform::DeviceContextPool::Instance(); + auto &dev_ctx = *pool.Get(t.place()); + dev_ctx.Wait(); + + os << tt; + return os; + } + os << "dim: " << t.dims() << "\n"; os << "lod: " << t.lod() << "\n"; @@ -59,6 +69,12 @@ std::ostream &operator<<(std::ostream &os, const LoDTensor &t) { return os; } +std::string LoDToString(const LoD &lod) { + std::ostringstream stream; + stream << lod; + return stream.str(); +} + LoD SliceInLevel(const LoD &in, size_t level, size_t elem_begin, size_t elem_end) { PADDLE_ENFORCE_LT(level, in.size()); @@ -211,38 +227,23 @@ void DeserializeFromStream(std::istream &is, LoDTensor *tensor, DeserializeFromStream(is, static_cast(tensor), dev_ctx); } +// TODO(tonyyang-svail): make this function support LoD std::vector LoDTensor::SplitLoDTensor( const std::vector places) const { check_memory_size(); - // PADDLE_ENFORCE(lod().empty() || (lod().size() == 1 && lod()[0].empty()) - // , "Disable parallel lod for now"); PADDLE_ENFORCE(lod().empty(), "Disable parallel lod for now"); PADDLE_ENFORCE(dims()[0] % places.size() == 0, "Batch size should be divided by places size"); std::vector lods; for (size_t place_idx = 0; place_idx < places.size(); ++place_idx) { - size_t begin = place_idx * dims()[0] / places.size(); - size_t end = (place_idx + 1) * dims()[0] / places.size(); - auto src = Slice(static_cast(begin), static_cast(end)); + int begin = place_idx * dims()[0] / places.size(); + int end = (place_idx + 1) * dims()[0] / places.size(); - LoDTensor dst; - dst.Resize(src.dims()); + auto src = Slice(begin, end); auto &dst_place = places[place_idx]; - auto dst_ptr = dst.mutable_data(dst_place, src.type()); - - // TODO(tonyyang-svail): - // change the following to framework::Copy - auto src_place = src.place(); - auto src_ptr = src.data(); - auto size = src.numel() * SizeOfType(src.type()); - if (platform::is_cpu_place(src_place) && - platform::is_cpu_place(dst_place)) { - memory::Copy(boost::get(dst_place), dst_ptr, - boost::get(src_place), src_ptr, size); - } else { - PADDLE_THROW("Not Implemented"); - } + LoDTensor dst; + framework::Copy(src, dst_place, &dst); lods.emplace_back(dst); } @@ -250,28 +251,30 @@ std::vector LoDTensor::SplitLoDTensor( return lods; } +// TODO(tonyyang-svail): make this function support LoD void LoDTensor::MergeLoDTensor( - const std::vector &lod_tensors, platform::Place place) { - PADDLE_ENFORCE(platform::is_cpu_place(place)); + const std::vector &lod_tensors, + platform::Place dst_place) { PADDLE_ENFORCE(!lod_tensors.empty()); - framework::DDim new_dim = lod_tensors[0]->dims(); std::type_index new_type = lod_tensors[0]->type(); + auto new_layout = lod_tensors[0]->layout(); for (auto *lod : lod_tensors) { PADDLE_ENFORCE(new_dim == lod->dims()); PADDLE_ENFORCE(new_type == lod->type()); - PADDLE_ENFORCE(platform::is_cpu_place(lod->place())); + PADDLE_ENFORCE(new_layout == lod->layout()); } new_dim[0] *= lod_tensors.size(); Resize(new_dim); + set_layout(new_layout); - auto *dst_ptr = reinterpret_cast(mutable_data(place, new_type)); + mutable_data(dst_place, new_type); + int begin = 0; for (auto *src : lod_tensors) { - auto size = src->numel() * SizeOfType(src->type()); - memory::Copy(boost::get(place), dst_ptr, - boost::get(src->place()), - src->data(), size); - dst_ptr += size; + int end = begin + src->dims()[0]; + auto dst = Slice(begin, end); + framework::Copy(*src, dst_place, &dst); + begin = end; } } diff --git a/paddle/framework/lod_tensor.h b/paddle/framework/lod_tensor.h index 37753f5f4ddea4755ad6211007c367de00aad754..88ea78f2682b2ffc962c9663f6b3c636dedb931d 100644 --- a/paddle/framework/lod_tensor.h +++ b/paddle/framework/lod_tensor.h @@ -60,6 +60,8 @@ using LoD = std::vector>; std::ostream& operator<<(std::ostream& os, const LoD& lod); std::ostream& operator<<(std::ostream& os, const LoDTensor& t); +std::string LoDToString(const LoD& lod); + LoD SliceInLevel(const LoD& in, size_t level, size_t elem_begin, size_t elem_end); /* diff --git a/paddle/framework/op_desc.h b/paddle/framework/op_desc.h index 4cf784a0d0d319d09caa27b4e2b589bd7ac4f324..a5ffb162928bfd355d35d3f9b63aab59a88dd061 100644 --- a/paddle/framework/op_desc.h +++ b/paddle/framework/op_desc.h @@ -129,7 +129,7 @@ class OpDesc { } proto::OpDesc desc_; - // input arg name => output variable names + // input arg name => input variable names VariableNameMap inputs_; // output arg name => output variable names VariableNameMap outputs_; diff --git a/paddle/framework/op_kernel_type.h b/paddle/framework/op_kernel_type.h index 053897784c1c4350deadf39e2a009220d38f65f9..312bd5f892ac23c847c87388c9cadf2161028d3e 100644 --- a/paddle/framework/op_kernel_type.h +++ b/paddle/framework/op_kernel_type.h @@ -85,5 +85,10 @@ inline std::string KernelTypeToString(const OpKernelType& kernel_key) { return stream.str(); } +inline bool TransFromNeeded(const OpKernelType& l, const OpKernelType& r) { + return (!platform::places_are_same_class(l.place_, r.place_)) || + (l.data_type_ != r.data_type_) || (l.data_layout_ != r.data_layout_); +} + } // namespace framework } // namespace paddle diff --git a/paddle/framework/op_registry_test.cc b/paddle/framework/op_registry_test.cc index 66f07b6757fe1fe613e61ac66057be43ef5aced7..341da8befd45abd1a3fc86581be33319a8791567 100644 --- a/paddle/framework/op_registry_test.cc +++ b/paddle/framework/op_registry_test.cc @@ -368,24 +368,6 @@ TEST(OperatorRegistrar, OpWithMultiKernel) { // TODO(qiao) add priority back // use all available kernels - paddle::framework::UseALL(); op->Run(scope, cuda_place); EXPECT_EQ(op_test_value, -10); - - // remove cuda kernels - paddle::framework::UseCPU(); - op->Run(scope, cpu_place); - - EXPECT_EQ(op_test_value, -9); - - // add cuda kernels - paddle::framework::UseCUDA(); - op->Run(scope, cuda_place); - - EXPECT_EQ(op_test_value, -10); - - // use cudnn kernel - paddle::framework::UseCUDNN(); - op->Run(scope, cuda_place); - EXPECT_EQ(op_test_value, -20); } diff --git a/paddle/framework/operator.cc b/paddle/framework/operator.cc index 35ebe48ba682f135b7f85edb3b2999db7c29e51a..84c010df7c396fc21904ae3c980f5fad70b2ceac 100644 --- a/paddle/framework/operator.cc +++ b/paddle/framework/operator.cc @@ -11,72 +11,38 @@ distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */ +#include #include #include #include "paddle/framework/data_transform.h" -#include "paddle/framework/device_data_transform.h" #include "paddle/framework/executor.h" #include "paddle/framework/operator.h" #include "paddle/framework/shape_inference.h" #include "paddle/framework/var_type.h" +DEFINE_bool(op_sync, false, + "Default cuda is asynchronous device, set to True will" + "force op run in synchronous mode."); + namespace paddle { namespace framework { -std::vector> kKernelPriority; - -void UseCPU() { - kKernelPriority.clear(); - /*Plain CPU*/ - auto pair0 = std::make_tuple(platform::CPUPlace(), LibraryType::kPlain); - kKernelPriority.insert(kKernelPriority.begin(), pair0); -} - -void UseMKLDNN() { - UseCPU(); -#if PADDLE_WITH_MKLML - { - /*MKLDNN Kernel*/ - auto pair0 = std::make_tuple(platform::CPUPlace(), LibraryType::kMKLDNN); - kKernelPriority.insert(kKernelPriority.begin(), pair0); - } -#endif -} - -void UseCUDA() { - UseMKLDNN(); -#if PADDLE_WITH_CUDA - /*Plain GPU*/ - auto pair0 = std::make_tuple(platform::CUDAPlace(0), LibraryType::kPlain); - kKernelPriority.insert(kKernelPriority.begin(), pair0); -#endif -} - -void UseCUDNN() { - UseCUDA(); -#if PADDLE_WITH_CUDA - if (platform::dynload::HasCUDNN()) { - /*CUDNN Kernel*/ - auto pair0 = std::make_tuple(platform::CUDAPlace(0), LibraryType::kCUDNN); - kKernelPriority.insert(kKernelPriority.begin(), pair0); - } -#endif -} - -void UseALL() { - UseCPU(); - UseMKLDNN(); - UseCUDA(); - UseCUDNN(); -} +std::vector> kKernelPriority = { + std::make_tuple(platform::CUDAPlace(0), LibraryType::kCUDNN), + std::make_tuple(platform::CUDAPlace(0), LibraryType::kPlain), + std::make_tuple(platform::CPUPlace(), LibraryType::kMKLDNN), + std::make_tuple(platform::CPUPlace(), LibraryType::kPlain), +}; static DDim GetDims(const Scope& scope, const std::string& name) { Variable* var = scope.FindVar(name); if (var == nullptr) { return DDim({-1}); - } else if (var->IsType()) { + } + + if (var->IsType()) { return var->Get().dims(); } else if (var->IsType()) { return var->Get().GetCompleteDims(); @@ -85,6 +51,21 @@ static DDim GetDims(const Scope& scope, const std::string& name) { } } +static LoD GetLoD(const Scope& scope, const std::string& name) { + Variable* var = scope.FindVar(name); + auto default_lod = LoD({{}}); + + if (var == nullptr) { + return default_lod; + } + + if (var->IsType()) { + return var->Get().lod(); + } else { + return default_lod; + } +} + std::string OperatorBase::Input(const std::string& name) const { auto& ins = Inputs(name); PADDLE_ENFORCE_LE(ins.size(), 1UL, @@ -126,7 +107,8 @@ std::string OperatorBase::DebugStringEx(const Scope* scope) const { for (size_t i = 0; i < input.second.size(); ++i) { ss << input.second[i]; if (scope) { - ss << "(" << GetDims(*scope, input.second[i]) << ")"; + ss << "[" << GetDims(*scope, input.second[i]) << "]"; + ss << "(" << GetLoD(*scope, input.second[i]) << ")"; } if (i != input.second.size() - 1) { ss << ", "; @@ -145,7 +127,8 @@ std::string OperatorBase::DebugStringEx(const Scope* scope) const { for (size_t i = 0; i < output.second.size(); ++i) { ss << output.second[i]; if (scope) { - ss << "(" << GetDims(*scope, output.second[i]) << ")"; + ss << "[" << GetDims(*scope, output.second[i]) << "]"; + ss << "(" << GetLoD(*scope, output.second[i]) << ")"; } if (i != output.second.size() - 1) { ss << ", "; @@ -248,36 +231,33 @@ static bool VarIsTensor(const Variable* var) { return var->IsType() || var->IsType(); } -static const Tensor* GetTensorFromVar(const Variable* var) { - const Tensor* t = nullptr; +static const Tensor* GetTensorFromVar(Variable* var) { if (var->IsType()) { - t = &(var->Get()); + return var->GetMutable(); } else if (var->IsType()) { - t = &(var->Get().value()); + return var->GetMutable()->mutable_value(); } else { PADDLE_THROW("Variable type_id %s, expect LoDTensor/SelectedRows.", var->Type().name()); } - return t; } static Tensor* GetMutableTensorFromVar(Variable* var) { - Tensor* t = nullptr; if (var->IsType()) { - t = var->GetMutable(); + return var->GetMutable(); } else if (var->IsType()) { - t = var->GetMutable()->mutable_value(); + return var->GetMutable()->mutable_value(); } else { PADDLE_THROW("Variable type_id %s, expect LoDTensor/SelectedRows.", var->Type().name()); } - return t; } template <> const Tensor* ExecutionContext::Input(const std::string& name) const { auto* var = InputVar(name); - return var == nullptr ? nullptr : GetTensorFromVar(var); + return var == nullptr ? nullptr + : GetTensorFromVar(const_cast(var)); } template <> @@ -320,6 +300,7 @@ bool OpSupportGPU(const std::string& op_type) { auto it = all_kernels.find(op_type); if (it == all_kernels.end()) { // All control operator must support GPU + return true; } for (auto& kern_pair : it->second) { @@ -493,21 +474,17 @@ void OperatorWithKernel::Run(const Scope& scope, } ExecutionContext ctx(*this, scope, *dev_ctx); - auto expected_kernel_key = this->GetExpectedKernelType(ctx); OpKernelMap& kernels = kernels_iter->second; - for (auto& candidate : kKernelPriority) { - auto candidate_key = - OpKernelType(expected_kernel_key.data_type_, std::get<0>(candidate), - expected_kernel_key.data_layout_, std::get<1>(candidate)); + // TODO(dzhwinter) : kernel fallback mechanism will be added when all the + // transform functions are ready. - if ((candidate_key == expected_kernel_key) || - (kernels.count(candidate_key))) { - expected_kernel_key = candidate_key; - break; - } - } + // for (auto& candidate : kKernelPriority) { + // Do selection + // } + + auto expected_kernel_key = this->GetExpectedKernelType(ctx); VLOG(3) << "expected_kernel_key:" << expected_kernel_key; @@ -521,7 +498,7 @@ void OperatorWithKernel::Run(const Scope& scope, if (tensor_in->IsInitialized()) { auto kernel_type_for_var = this->GetKernelTypeForVar( var_name_item.first, *tensor_in, expected_kernel_key); - if (kernel_type_for_var != expected_kernel_key) { + if (TransFromNeeded(kernel_type_for_var, expected_kernel_key)) { auto out_var_names = OutputVars(true); if (std::find(out_var_names.begin(), out_var_names.end(), var_name) != out_var_names.end()) { @@ -530,11 +507,13 @@ void OperatorWithKernel::Run(const Scope& scope, "does not support transform", var_name); } - VLOG(3) << "need to do transform for var " << var_name; + VLOG(3) << "Transform Variable " << var_name << " from " + << kernel_type_for_var << " to " << expected_kernel_key; auto* trans_var = new_scope.Var(var_name); - auto* out = DataTransform(expected_kernel_key, kernel_type_for_var, - *tensor_in); - CopyVariableWithTensor(*var, *out, *trans_var); + std::shared_ptr out(new Tensor); + DataTransform(expected_kernel_key, kernel_type_for_var, *tensor_in, + out.get()); + CopyVariableWithTensor(*var, *(out.get()), *trans_var); } } } @@ -543,8 +522,14 @@ void OperatorWithKernel::Run(const Scope& scope, auto kernel_iter = kernels.find(expected_kernel_key); - kernel_iter->second->Compute(ExecutionContext( - *this, new_scope, *pool.Get(expected_kernel_key.place_))); + auto* new_dev_ctx = pool.Get(expected_kernel_key.place_); + kernel_iter->second->Compute( + ExecutionContext(*this, new_scope, *new_dev_ctx)); + + /*For profiling/benchmark only*/ + if (FLAGS_op_sync) { + new_dev_ctx->Wait(); + } } proto::DataType OperatorWithKernel::IndicateDataType( diff --git a/paddle/framework/operator.h b/paddle/framework/operator.h index d5feb598649c97a9517b7c2b1764fd54ff9f8693..c9140f304c89e32a0fa8bd24722cc2e5dbc4e2e1 100644 --- a/paddle/framework/operator.h +++ b/paddle/framework/operator.h @@ -54,33 +54,9 @@ constexpr char kGradVarSuffix[] = "@GRAD"; constexpr char kZeroVarSuffix[] = "@ZERO"; // define some kernel priority +/* Define multiple kernel type fallback order*/ extern std::vector> kKernelPriority; -/** - * @brief Use cpu kernel only - */ -void UseCPU(); - -/** - * @brief Perfer MKLDNN kernel than Plain CPU kernel - */ -void UseMKLDNN(); - -/** - * @brief Perfer CUDA kernel than Plain CPU kernel - */ -void UseCUDA(); - -/** - * @brief Perfer cudnn kernel than Plain CUDA kernel - */ -void UseCUDNN(); - -/** - * @brief Use all available kernels - */ -void UseALL(); - inline std::string GradVarName(const std::string& var_name) { return var_name + kGradVarSuffix; } diff --git a/paddle/framework/tensor_util.h b/paddle/framework/tensor_util.h index 7c56ccf17f94e29d06f529629c47f61b93d2bd22..091b63bf0f907a5449f08f0e36abb6577fa5e43e 100644 --- a/paddle/framework/tensor_util.h +++ b/paddle/framework/tensor_util.h @@ -31,9 +31,10 @@ namespace framework { * * @note Copy supports CPU <-> GPU, GPU <-> GPU. */ - inline void Copy(const Tensor& src, const platform::Place& dst_place, const platform::DeviceContext& ctx, Tensor* dst) { + VLOG(3) << "Copy " << src.dims() << " from " << src.place() << " to " + << dst_place; src.check_memory_size(); dst->Resize(src.dims()); @@ -88,26 +89,25 @@ inline void Copy(const Tensor& src, const platform::Place& dst_place, } /** - * @brief Copy supports CPU <-> CPU + * @brief Wrapper on + * Copy(const Tensor& src, const platform::Place& dst_place, + * const platform::DeviceContext& ctx, Tensor* dst); + * + * @param[in] src The external tensor. + * @param[in] dst_place The dst place. + * + * @note Copy supports CPU <-> GPU, GPU <-> GPU. */ inline void Copy(const Tensor& src, const platform::Place& dst_place, Tensor* dst) { - src.check_memory_size(); - dst->Resize(src.dims()); - dst->set_layout(src.layout()); - - auto src_place = src.place(); - auto src_ptr = src.data(); - - auto dst_ptr = dst->mutable_data(dst_place, src.type()); - - auto size = src.numel() * SizeOfType(src.type()); - - PADDLE_ENFORCE(platform::is_cpu_place(src_place) && - platform::is_cpu_place(dst_place)); - - memory::Copy(boost::get(dst_place), dst_ptr, - boost::get(src_place), src_ptr, size); + platform::DeviceContextPool& pool = platform::DeviceContextPool::Instance(); + const platform::DeviceContext* dev_ctx; + if (platform::is_gpu_place(src.place())) { + dev_ctx = pool.Get(src.place()); + } else { + dev_ctx = pool.Get(dst_place); + } + Copy(src, dst_place, *dev_ctx, dst); } /** @@ -116,8 +116,8 @@ inline void Copy(const Tensor& src, const platform::Place& dst_place, * @param[in] src The external tensor. * @param[in] ctx The device context contains device resources. * - * * @note CopyFromVector assumes that the tensor has been resized - * before invoking. + * * @note CopyFromVector will resize dst to an 1D tensor with the same + * size as src. */ template inline void CopyFromVector(const std::vector& src, diff --git a/paddle/framework/var_desc.cc b/paddle/framework/var_desc.cc index aeab18d7214f8d9dd79bc3d2e0322490445b3b49..62ab6593ef23c195e3caa2336574796ecaf35bc8 100644 --- a/paddle/framework/var_desc.cc +++ b/paddle/framework/var_desc.cc @@ -74,7 +74,7 @@ const proto::TensorDesc &VarDesc::tensor_desc() const { case proto::VarDesc::LOD_TENSOR_ARRAY: return desc_.tensor_array().tensor(); default: - PADDLE_THROW("The type of var '", this->Name(), "' is unsupported."); + PADDLE_THROW("The type of var %s is unsupported.", this->Name()); } } diff --git a/paddle/gserver/layers/MKLDNNLayer.cpp b/paddle/gserver/layers/MKLDNNLayer.cpp index 6fbf3c7fdec2f537769adb660c67c5a597beb609..2d0fff608c3932ede57ddcbb6a85cda255b77246 100644 --- a/paddle/gserver/layers/MKLDNNLayer.cpp +++ b/paddle/gserver/layers/MKLDNNLayer.cpp @@ -132,6 +132,8 @@ void MKLDNNLayer::reshapeInput(int& batchsize, if (w != 0) { width = w; } + height = height != 0 ? height : 1; + width = width != 0 ? width : 1; } void MKLDNNLayer::reshapeOutput(size_t height, size_t width) { diff --git a/paddle/gserver/layers/MKLDNNLayer.h b/paddle/gserver/layers/MKLDNNLayer.h index e48b9b5a91f7f17cb3f31e9140f1428ba8954a20..3ba39f18b6ae4b38c17b3b72a359fd514e6dad5b 100644 --- a/paddle/gserver/layers/MKLDNNLayer.h +++ b/paddle/gserver/layers/MKLDNNLayer.h @@ -98,6 +98,8 @@ protected: public: explicit MKLDNNLayer(const LayerConfig& config) : Layer(config), + ih_(0), + iw_(0), condition_(0), needResetBwd_(true), outputOnlyMKLDNN_(false), diff --git a/paddle/operators/CMakeLists.txt b/paddle/operators/CMakeLists.txt index 5889a50db09534b30f0f57b4e659df440901f3b1..2569535c257c3210c239b69cd464ae59a8f4747c 100644 --- a/paddle/operators/CMakeLists.txt +++ b/paddle/operators/CMakeLists.txt @@ -135,9 +135,8 @@ op_library(detection_output_op DEPS softmax) op_library(sequence_softmax_op DEPS softmax) op_library(sum_op DEPS selected_rows_functor) op_library(sgd_op DEPS selected_rows_functor) +op_library(print_op DEPS lod_tensor) op_library(adagrad_op DEPS selected_rows_functor) -op_library(conv_op DEPS vol2col) -op_library(pool_op DEPS pooling) op_library(maxout_op DEPS maxouting) op_library(unpool_op DEPS unpooling) op_library(pool_with_index_op DEPS pooling) @@ -148,12 +147,27 @@ op_library(max_sequence_len_op DEPS lod_rank_table) op_library(sequence_conv_op DEPS context_project) op_library(sequence_pool_op DEPS sequence_pooling) op_library(lstm_op DEPS sequence2batch lstm_compute) -op_library(conv_transpose_op DEPS vol2col) op_library(gru_op DEPS sequence2batch gru_compute) op_library(recurrent_op DEPS executor) op_library(warpctc_op DEPS dynload_warpctc sequence_padding math_function) op_library(cos_sim_op DEPS cos_sim_functor) op_library(parallel_do_op DEPS executor) + +# Regist multiple Kernel to pybind +if (WITH_GPU) +op_library(conv_op SRCS conv_op.cc conv_op.cu.cc conv_cudnn_op.cu.cc DEPS vol2col) +op_library(pool_op SRCS pool_op.cc pool_op.cu.cc pool_cudnn_op.cu.cc DEPS pooling) +op_library(conv_transpose_op SRCS conv_transpose_op.cc conv_transpose_op.cu.cc + conv_transpose_cudnn_op.cu.cc DEPS vol2col) +file(APPEND ${pybind_file} "USE_OP_DEVICE_KERNEL(conv2d, CUDNN);\n") +file(APPEND ${pybind_file} "USE_OP_DEVICE_KERNEL(pool2d, CUDNN);\n") +file(APPEND ${pybind_file} "USE_OP_DEVICE_KERNEL(conv2d_transpose, CUDNN);\n") +else() +op_library(conv_op SRCS conv_op.cc DEPS vol2col) +op_library(pool_op SRCS pool_op.cc DEPS pooling) +op_library(conv_transpose_op SRCS conv_transpose_op.cc DEPS vol2col) +endif() + # FIXME(typhoonzero): save/load depends lodtensor serialization functions op_library(save_op DEPS lod_tensor) op_library(load_op DEPS lod_tensor) diff --git a/paddle/operators/assign_value_op.cc b/paddle/operators/assign_value_op.cc new file mode 100644 index 0000000000000000000000000000000000000000..d5671c1183a0f58d2aedb0723bd462684ac5636e --- /dev/null +++ b/paddle/operators/assign_value_op.cc @@ -0,0 +1,73 @@ +/* Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include "paddle/operators/assign_value_op.h" + +namespace paddle { +namespace operators { + +class AssignValueOp : public framework::OperatorWithKernel { + public: + AssignValueOp(const std::string &type, + const framework::VariableNameMap &inputs, + const framework::VariableNameMap &outputs, + const framework::AttributeMap &attrs) + : OperatorWithKernel(type, inputs, outputs, attrs) {} + + void InferShape(framework::InferShapeContext *ctx) const override { + PADDLE_ENFORCE(ctx->HasOutput("Out"), + "Output(Out) of AssignValueOp should not be null."); + auto shape = ctx->Attrs().Get>("shape"); + ctx->SetOutputDim("Out", framework::make_ddim(shape)); + } + + protected: + framework::OpKernelType GetExpectedKernelType( + const framework::ExecutionContext &ctx) const override { + return framework::OpKernelType( + framework::proto::DataType(ctx.Attr("dtype")), ctx.GetPlace()); + } +}; + +class AssignValueOpMaker : public framework::OpProtoAndCheckerMaker { + public: + AssignValueOpMaker(OpProto *proto, OpAttrChecker *op_checker) + : OpProtoAndCheckerMaker(proto, op_checker) { + AddOutput("Out", "(Tensor) Output tensor of assign_value operator."); + AddAttr>("shape", + "(vector) " + "Shape of values."); + AddAttr("dtype", "data type of values") + .InEnum({framework::proto::DataType::INT32, + framework::proto::DataType::FP32}); + AddAttr>("fp32_values", "store the float values") + .SetDefault({}); + AddAttr>("int32_values", "store the int values") + .SetDefault({}); + AddComment(R"DOC( +AssignValue operator + +$$Out = values$$ +)DOC"); + } +}; + +} // namespace operators +} // namespace paddle + +namespace ops = paddle::operators; + +REGISTER_OPERATOR(assign_value, ops::AssignValueOp, ops::AssignValueOpMaker); +REGISTER_OP_CPU_KERNEL(assign_value, ops::AssignValueKernel, + ops::AssignValueKernel); diff --git a/paddle/operators/pool_cudnn_op.h b/paddle/operators/assign_value_op.cu.cc similarity index 68% rename from paddle/operators/pool_cudnn_op.h rename to paddle/operators/assign_value_op.cu.cc index 5adf27f5bccae8542719612320bc6dbe21007634..b17e20150053cea4c6b9ed6a5f222f77f4a4bd36 100644 --- a/paddle/operators/pool_cudnn_op.h +++ b/paddle/operators/assign_value_op.cu.cc @@ -1,19 +1,19 @@ /* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. -You may obtain a copy of the License at +Indicesou may obtain a copy of the License at + http://www.apache.org/licenses/LICENSE-2.0 + Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */ -#pragma once - -#include "paddle/framework/op_registry.h" -#include "paddle/operators/pool_op.h" +#include "paddle/operators/assign_value_op.h" -namespace paddle { -namespace operators {} // namespace operators -} // namespace paddle +namespace ops = paddle::operators; +REGISTER_OP_CUDA_KERNEL(assign_value, ops::AssignValueKernel, + ops::AssignValueKernel); diff --git a/paddle/operators/assign_value_op.h b/paddle/operators/assign_value_op.h new file mode 100644 index 0000000000000000000000000000000000000000..db2e43077999fa0f9aaada74026dd701ab2bf464 --- /dev/null +++ b/paddle/operators/assign_value_op.h @@ -0,0 +1,50 @@ +/* Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#pragma once + +#include "paddle/framework/eigen.h" +#include "paddle/framework/op_registry.h" +#include "paddle/platform/enforce.h" + +namespace paddle { +namespace operators { + +template +class AssignValueKernel : public framework::OpKernel { + public: + virtual void Compute(const framework::ExecutionContext& ctx) const { + auto shape = ctx.Attr>("shape"); + auto* out = ctx.Output("Out"); + int dtype = ctx.Attr("dtype"); + const char* value_name = nullptr; + switch (dtype) { + case framework::proto::DataType::INT32: + value_name = "int32_values"; + break; + case framework::proto::DataType::FP32: + value_name = "fp32_values"; + break; + default: + PADDLE_THROW("Unsupported dtype for assign_value_op: %d", dtype); + break; + } + auto values = ctx.Attr>(value_name); + framework::CopyFromVector(values, ctx.device_context(), out); + out->Resize(framework::make_ddim(shape)); + } +}; + +} // namespace operators +} // namespace paddle diff --git a/paddle/operators/conv_cudnn_op.cc b/paddle/operators/conv_cudnn_op.cc deleted file mode 100644 index 84d9ce1973a4cccadcb8f78feaecbcaa9e7af312..0000000000000000000000000000000000000000 --- a/paddle/operators/conv_cudnn_op.cc +++ /dev/null @@ -1,74 +0,0 @@ -/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. - -Licensed under the Apache License, Version 2.0 (the "License"); -you may not use this file except in compliance with the License. -You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - -Unless required by applicable law or agreed to in writing, software -distributed under the License is distributed on an "AS IS" BASIS, -WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -See the License for the specific language governing permissions and -limitations under the License. */ - -#include "paddle/operators/conv_op.h" - -namespace paddle { -namespace operators { - -class CudnnConv2DOpMaker : public Conv2DOpMaker { - public: - CudnnConv2DOpMaker(OpProto* proto, OpAttrChecker* op_checker) - : Conv2DOpMaker(proto, op_checker) { - AddAttr("workspace_size_MB", - "workspace size for cudnn, in MB, " - "workspace is a section of GPU memory which will be " - "allocated/freed each time the operator runs, larger " - "workspace size can increase performance but also requires " - "better hardware. This size should be chosen carefully.") - .SetDefault(4096); - } -}; - -class CudnnConv3DOpMaker : public Conv3DOpMaker { - public: - CudnnConv3DOpMaker(OpProto* proto, OpAttrChecker* op_checker) - : Conv3DOpMaker(proto, op_checker) { - AddAttr("workspace_size_MB", - "workspace size for cudnn, in MB, " - "workspace is a section of GPU memory which will be " - "allocated/freed each time the operator runs, larger " - "workspace size can increase performance but also requires " - "better hardware. This size should be chosen carefully.") - .SetDefault(4096); - } -}; - -} // namespace operators -} // namespace paddle - -namespace ops = paddle::operators; -REGISTER_OP(conv2d_cudnn, ops::ConvOp, ops::CudnnConv2DOpMaker, - conv2d_cudnn_grad, ops::ConvOpGrad); - -REGISTER_OP(conv3d_cudnn, ops::ConvOp, ops::CudnnConv3DOpMaker, - conv3d_cudnn_grad, ops::ConvOpGrad); - -REGISTER_OP_CPU_KERNEL( - conv2d_cudnn, - ops::GemmConvKernel, - ops::GemmConvKernel); -REGISTER_OP_CPU_KERNEL( - conv2d_cudnn_grad, - ops::GemmConvGradKernel, - ops::GemmConvGradKernel); - -REGISTER_OP_CPU_KERNEL( - conv3d_cudnn, - ops::GemmConvKernel, - ops::GemmConvKernel); -REGISTER_OP_CPU_KERNEL( - conv3d_cudnn_grad, - ops::GemmConvGradKernel, - ops::GemmConvGradKernel); diff --git a/paddle/operators/conv_cudnn_op.cu.cc b/paddle/operators/conv_cudnn_op.cu.cc index 0c5ed3e4e80304c6fd174975166804347feb18b1..3a5409a7e3f29a4c46839d6395760fc7fe8c086e 100644 --- a/paddle/operators/conv_cudnn_op.cu.cc +++ b/paddle/operators/conv_cudnn_op.cu.cc @@ -32,7 +32,7 @@ static constexpr size_t kCONV_CUDNN_WORKSPACE_LIMIT_BYTES = static_cast(1024) * 1024 * 1024; template -class CudnnConvOpKernel : public framework::OpKernel { +class CUDNNConvOpKernel : public framework::OpKernel { public: void Compute(const framework::ExecutionContext& ctx) const override { PADDLE_ENFORCE(platform::is_gpu_place(ctx.GetPlace()), @@ -147,7 +147,7 @@ class CudnnConvOpKernel : public framework::OpKernel { }; template -class CudnnConvGradOpKernel : public framework::OpKernel { +class CUDNNConvGradOpKernel : public framework::OpKernel { public: void Compute(const framework::ExecutionContext& ctx) const override { PADDLE_ENFORCE(platform::is_gpu_place(ctx.GetPlace()), @@ -315,17 +315,16 @@ class CudnnConvGradOpKernel : public framework::OpKernel { } // namespace operators } // namespace paddle -// TODO(dzhwinter) : below register should be removed -REGISTER_OP_CUDA_KERNEL(conv2d_cudnn, - paddle::operators::CudnnConvOpKernel, - paddle::operators::CudnnConvOpKernel); -REGISTER_OP_CUDA_KERNEL(conv2d_cudnn_grad, - paddle::operators::CudnnConvGradOpKernel, - paddle::operators::CudnnConvGradOpKernel); - -REGISTER_OP_CUDA_KERNEL(conv3d_cudnn, - paddle::operators::CudnnConvOpKernel, - paddle::operators::CudnnConvOpKernel); -REGISTER_OP_CUDA_KERNEL(conv3d_cudnn_grad, - paddle::operators::CudnnConvGradOpKernel, - paddle::operators::CudnnConvGradOpKernel); +REGISTER_OP_KERNEL(conv2d, CUDNN, ::paddle::platform::CUDAPlace, + paddle::operators::CUDNNConvOpKernel, + paddle::operators::CUDNNConvOpKernel); +REGISTER_OP_KERNEL(conv2d_grad, CUDNN, ::paddle::platform::CUDAPlace, + paddle::operators::CUDNNConvGradOpKernel, + paddle::operators::CUDNNConvGradOpKernel); + +REGISTER_OP_KERNEL(conv3d, CUDNN, ::paddle::platform::CUDAPlace, + paddle::operators::CUDNNConvOpKernel, + paddle::operators::CUDNNConvOpKernel); +REGISTER_OP_KERNEL(conv3d_grad, CUDNN, ::paddle::platform::CUDAPlace, + paddle::operators::CUDNNConvGradOpKernel, + paddle::operators::CUDNNConvGradOpKernel); diff --git a/paddle/operators/conv_op.cc b/paddle/operators/conv_op.cc index 1468e3eb960a2b7c2e7af83ff701338596606922..424eccdb7dc57195d20f75460032a99c76e6adcd 100644 --- a/paddle/operators/conv_op.cc +++ b/paddle/operators/conv_op.cc @@ -67,6 +67,23 @@ void ConvOp::InferShape(framework::InferShapeContext* ctx) const { ctx->ShareLoD("Input", "Output"); } +framework::OpKernelType ConvOp::GetExpectedKernelType( + const framework::ExecutionContext& ctx) const { + bool use_cudnn = ctx.Attr("use_cudnn"); + framework::LibraryType library_; + if (use_cudnn) { + library_ = framework::LibraryType::kCUDNN; + } else { + library_ = framework::LibraryType::kPlain; + } + + std::string data_format = ctx.Attr("data_format"); + framework::DataLayout layout_ = framework::StringToDataLayout(data_format); + return framework::OpKernelType( + framework::ToDataType(ctx.Input("Input")->type()), ctx.GetPlace(), + layout_, library_); +} + Conv2DOpMaker::Conv2DOpMaker(OpProto* proto, OpAttrChecker* op_checker) : OpProtoAndCheckerMaker(proto, op_checker) { AddInput( @@ -108,6 +125,26 @@ Conv2DOpMaker::Conv2DOpMaker(OpProto* proto, OpAttrChecker* op_checker) "dilations(h_dilation, w_dilation) of " "convolution operator.") .SetDefault({1, 1}); + AddAttr( + "use_cudnn", + "(bool, default false) Only used in cudnn kernel, need install cudnn") + .SetDefault(false); + AddAttr( + "data_format", + "(string, default NCHW) Only used in " + "An optional string from: \"NHWC\", \"NCHW\". " + "Defaults to \"NHWC\". Specify the data format of the output data, " + "the input will be transformed automatically. ") + .SetDefault("AnyLayout"); + // TODO(dzhwinter): need to registered layout transform function + AddAttr("workspace_size_MB", + "Only used in cudnn kernel. Need set use_cudnn to true." + "workspace size for cudnn, in MB, " + "workspace is a section of GPU memory which will be " + "allocated/freed each time the operator runs, larger " + "workspace size can increase performance but also requires " + "better hardware. This size should be chosen carefully.") + .SetDefault(4096); AddComment(R"DOC( Convolution Operator. @@ -181,6 +218,25 @@ Conv3DOpMaker::Conv3DOpMaker(OpProto* proto, OpAttrChecker* op_checker) "dilations(d_dilation, h_dilation, w_dilation) of " "convolution operator.") .SetDefault({1, 1, 1}); + AddAttr( + "use_cudnn", + "(bool, default false) Only used in cudnn kernel, need install cudnn") + .SetDefault(false); + AddAttr( + "data_format", + "(string, default NCHW) Only used in " + "An optional string from: \"NHWC\", \"NCHW\". " + "Defaults to \"NHWC\". Specify the data format of the output data, " + "the input will be transformed automatically. ") + .SetDefault("AnyLayout"); + // TODO(dzhwinter): need to registered layout transform function + AddAttr("workspace_size_MB", + "Only used in cudnn kernel. workspace size for cudnn, in MB, " + "workspace is a section of GPU memory which will be " + "allocated/freed each time the operator runs, larger " + "workspace size can increase performance but also requires " + "better hardware. This size should be chosen carefully.") + .SetDefault(4096); AddComment(R"DOC( Convolution3D Operator. @@ -224,6 +280,23 @@ void ConvOpGrad::InferShape(framework::InferShapeContext* ctx) const { } } +framework::OpKernelType ConvOpGrad::GetExpectedKernelType( + const framework::ExecutionContext& ctx) const { + bool use_cudnn = ctx.Attr("use_cudnn"); + framework::LibraryType library_; + if (use_cudnn) { + library_ = framework::LibraryType::kCUDNN; + } else { + library_ = framework::LibraryType::kPlain; + } + + std::string data_format = ctx.Attr("data_format"); + framework::DataLayout layout_ = framework::StringToDataLayout(data_format); + return framework::OpKernelType( + framework::ToDataType(ctx.Input("Input")->type()), ctx.GetPlace(), + layout_, library_); +} + } // namespace operators } // namespace paddle diff --git a/paddle/operators/conv_op.h b/paddle/operators/conv_op.h index 83786e2329e7ae3c2908fdfdaeb1f79d19a53f47..5a8933e7915960f9fcbe92ae73c4f37b3b69ecaf 100644 --- a/paddle/operators/conv_op.h +++ b/paddle/operators/conv_op.h @@ -62,12 +62,20 @@ class ConvOp : public framework::OperatorWithKernel { public: using framework::OperatorWithKernel::OperatorWithKernel; void InferShape(framework::InferShapeContext* ctx) const override; + + protected: + framework::OpKernelType GetExpectedKernelType( + const framework::ExecutionContext& ctx) const override; }; class ConvOpGrad : public framework::OperatorWithKernel { public: using framework::OperatorWithKernel::OperatorWithKernel; void InferShape(framework::InferShapeContext* ctx) const override; + + protected: + framework::OpKernelType GetExpectedKernelType( + const framework::ExecutionContext& ctx) const override; }; template diff --git a/paddle/operators/conv_transpose_cudnn_op.cc b/paddle/operators/conv_transpose_cudnn_op.cc deleted file mode 100644 index 2e5333a265f2f59f31c651b8bb080599ec6e31a4..0000000000000000000000000000000000000000 --- a/paddle/operators/conv_transpose_cudnn_op.cc +++ /dev/null @@ -1,78 +0,0 @@ -/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. - -Licensed under the Apache License, Version 2.0 (the "License"); -you may not use this file except in compliance with the License. -You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - -Unless required by applicable law or agreed to in writing, software -distributed under the License is distributed on an "AS IS" BASIS, -WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -See the License for the specific language governing permissions and -limitations under the License. */ - -#include "paddle/operators/conv_transpose_op.h" - -namespace paddle { -namespace operators { - -class CudnnConv2DTransposeOpMaker : public Conv2DTransposeOpMaker { - public: - CudnnConv2DTransposeOpMaker(OpProto* proto, OpAttrChecker* op_checker) - : Conv2DTransposeOpMaker(proto, op_checker) { - AddAttr("workspace_size_MB", - "workspace size for cudnn, in MB, " - "workspace is a section of GPU memory which will be " - "allocated/freed each time the operator runs, larger " - "workspace size can increase performance but also requires " - "better hardward. This size should be carefully setted.") - .SetDefault(4096); - } -}; - -class CudnnConv3DTransposeOpMaker : public Conv3DTransposeOpMaker { - public: - CudnnConv3DTransposeOpMaker(OpProto* proto, OpAttrChecker* op_checker) - : Conv3DTransposeOpMaker(proto, op_checker) { - AddAttr("workspace_size_MB", - "workspace size for cudnn, in MB, " - "workspace is a section of GPU memory which will be " - "allocated/freed each time the operator runs, larger " - "workspace size can increase performance but also requires " - "better hardward. This size should be carefully setted.") - .SetDefault(4096); - } -}; - -} // namespace operators -} // namespace paddle - -namespace ops = paddle::operators; -REGISTER_OP(conv2d_transpose_cudnn, ops::ConvTransposeOp, - ops::CudnnConv2DTransposeOpMaker, conv2d_transpose_cudnn_grad, - ops::ConvTransposeOpGrad); - -REGISTER_OP_CPU_KERNEL( - conv2d_transpose_cudnn, - ops::GemmConvTransposeKernel, - ops::GemmConvTransposeKernel); -REGISTER_OP_CPU_KERNEL( - conv2d_transpose_cudnn_grad, - ops::GemmConvTransposeGradKernel, - ops::GemmConvTransposeGradKernel); - -REGISTER_OP(conv3d_transpose_cudnn, ops::ConvTransposeOp, - ops::CudnnConv3DTransposeOpMaker, conv3d_transpose_cudnn_grad, - ops::ConvTransposeOpGrad); - -REGISTER_OP_CPU_KERNEL( - conv3d_transpose_cudnn, - ops::GemmConvTransposeKernel, - ops::GemmConvTransposeKernel); -REGISTER_OP_CPU_KERNEL( - conv3d_transpose_cudnn_grad, - ops::GemmConvTransposeGradKernel, - ops::GemmConvTransposeGradKernel); diff --git a/paddle/operators/conv_transpose_cudnn_op.cu.cc b/paddle/operators/conv_transpose_cudnn_op.cu.cc index fc37776ba1ed35aa6b2523eb593e9713cfcc54eb..23bc97e13c13e5c1d62a406be5e528ab272fa93a 100644 --- a/paddle/operators/conv_transpose_cudnn_op.cu.cc +++ b/paddle/operators/conv_transpose_cudnn_op.cu.cc @@ -28,10 +28,10 @@ using ScopedFilterDescriptor = platform::ScopedFilterDescriptor; using ScopedConvolutionDescriptor = platform::ScopedConvolutionDescriptor; using DataLayout = platform::DataLayout; -static constexpr size_t kConvCudnnWorkspaceLimitBytes = 1024 * 1024 * 1024; +static constexpr size_t kConvCUDNNWorkspaceLimitBytes = 1024 * 1024 * 1024; template -class CudnnConvTransposeOpKernel : public framework::OpKernel { +class CUDNNConvTransposeOpKernel : public framework::OpKernel { public: void Compute(const framework::ExecutionContext& ctx) const override { PADDLE_ENFORCE(platform::is_gpu_place(ctx.GetPlace()), @@ -77,7 +77,7 @@ class CudnnConvTransposeOpKernel : public framework::OpKernel { // ------------------- cudnn conv workspace --------------------- void* cudnn_workspace = nullptr; size_t workspace_size_in_bytes; // final workspace to allocate. - size_t workspace_size_limit = kConvCudnnWorkspaceLimitBytes; + size_t workspace_size_limit = kConvCUDNNWorkspaceLimitBytes; if (user_workspace_size > 0) { workspace_size_limit = user_workspace_size * 1024 * 1024; } @@ -116,7 +116,7 @@ class CudnnConvTransposeOpKernel : public framework::OpKernel { }; template -class CudnnConvTransposeGradOpKernel : public framework::OpKernel { +class CUDNNConvTransposeGradOpKernel : public framework::OpKernel { public: void Compute(const framework::ExecutionContext& ctx) const override { PADDLE_ENFORCE(platform::is_gpu_place(ctx.GetPlace()), @@ -161,7 +161,7 @@ class CudnnConvTransposeGradOpKernel : public framework::OpKernel { cudnnConvolutionBwdFilterAlgo_t filter_algo; size_t bwd_filter_ws_size, fwd_ws_size; size_t workspace_size_in_bytes = 0; - size_t workspace_size_limit = kConvCudnnWorkspaceLimitBytes; + size_t workspace_size_limit = kConvCUDNNWorkspaceLimitBytes; if (user_workspace_size > 0) { workspace_size_limit = user_workspace_size * 1024 * 1024; } @@ -236,16 +236,16 @@ class CudnnConvTransposeGradOpKernel : public framework::OpKernel { namespace ops = paddle::operators; -REGISTER_OP_CUDA_KERNEL(conv2d_transpose_cudnn, - ops::CudnnConvTransposeOpKernel, - ops::CudnnConvTransposeOpKernel); -REGISTER_OP_CUDA_KERNEL(conv2d_transpose_cudnn_grad, - ops::CudnnConvTransposeGradOpKernel, - ops::CudnnConvTransposeGradOpKernel); - -REGISTER_OP_CUDA_KERNEL(conv3d_transpose_cudnn, - ops::CudnnConvTransposeOpKernel, - ops::CudnnConvTransposeOpKernel); -REGISTER_OP_CUDA_KERNEL(conv3d_transpose_cudnn_grad, - ops::CudnnConvTransposeGradOpKernel, - ops::CudnnConvTransposeGradOpKernel); +REGISTER_OP_KERNEL(conv2d_transpose, CUDNN, ::paddle::platform::CUDAPlace, + ops::CUDNNConvTransposeOpKernel, + ops::CUDNNConvTransposeOpKernel); +REGISTER_OP_KERNEL(conv2d_transpose_grad, CUDNN, ::paddle::platform::CUDAPlace, + ops::CUDNNConvTransposeGradOpKernel, + ops::CUDNNConvTransposeGradOpKernel); + +REGISTER_OP_KERNEL(conv3d_transpose, CUDNN, ::paddle::platform::CUDAPlace, + ops::CUDNNConvTransposeOpKernel, + ops::CUDNNConvTransposeOpKernel); +REGISTER_OP_KERNEL(conv3d_transpose_grad, CUDNN, ::paddle::platform::CUDAPlace, + ops::CUDNNConvTransposeGradOpKernel, + ops::CUDNNConvTransposeGradOpKernel); diff --git a/paddle/operators/conv_transpose_op.cc b/paddle/operators/conv_transpose_op.cc index 74636d138f1e40474a1cc5453609dafe14fcaaab..cf4e8c0a303d6888c3b1f2475a483c4bfc90981b 100644 --- a/paddle/operators/conv_transpose_op.cc +++ b/paddle/operators/conv_transpose_op.cc @@ -58,6 +58,23 @@ void ConvTransposeOp::InferShape(framework::InferShapeContext* ctx) const { ctx->SetOutputDim("Output", framework::make_ddim(output_shape)); } +framework::OpKernelType ConvTransposeOp::GetExpectedKernelType( + const framework::ExecutionContext& ctx) const { + bool use_cudnn = ctx.Attr("use_cudnn"); + framework::LibraryType library_; + if (use_cudnn) { + library_ = framework::LibraryType::kCUDNN; + } else { + library_ = framework::LibraryType::kPlain; + } + + std::string data_format = ctx.Attr("data_format"); + framework::DataLayout layout_ = framework::StringToDataLayout(data_format); + return framework::OpKernelType( + framework::ToDataType(ctx.Input("Input")->type()), ctx.GetPlace(), + layout_, library_); +} + Conv2DTransposeOpMaker::Conv2DTransposeOpMaker(OpProto* proto, OpAttrChecker* op_checker) : OpProtoAndCheckerMaker(proto, op_checker) { @@ -94,6 +111,25 @@ Conv2DTransposeOpMaker::Conv2DTransposeOpMaker(OpProto* proto, "(vector default:{0, 0}), the paddings(h_pad, w_pad) of convolution " "transpose operator.") .SetDefault({0, 0}); + AddAttr( + "use_cudnn", + "(bool, default false) Only used in cudnn kernel, need install cudnn") + .SetDefault(false); + AddAttr( + "data_format", + "(string, default NCHW) Only used in " + "An optional string from: \"NHWC\", \"NCHW\". " + "Defaults to \"NHWC\". Specify the data format of the output data, " + "the input will be transformed automatically. ") + .SetDefault("AnyLayout"); + // TODO(dzhwinter): need to registered layout transform function + AddAttr("workspace_size_MB", + "Used in cudnn kernel only. workspace size for cudnn, in MB, " + "workspace is a section of GPU memory which will be " + "allocated/freed each time the operator runs, larger " + "workspace size can increase performance but also requires " + "better hardward. This size should be carefully setted.") + .SetDefault(4096); AddComment(R"DOC( Convolution2D Transpose Operator. @@ -163,6 +199,25 @@ Conv3DTransposeOpMaker::Conv3DTransposeOpMaker(OpProto* proto, "(vector default:{0, 0, 0}), paddings(d_pad, " "h_pad, w_pad) of convolution transpose operator.") .SetDefault({0, 0, 0}); + AddAttr( + "use_cudnn", + "(bool, default false) Only used in cudnn kernel, need install cudnn") + .SetDefault(false); + AddAttr( + "data_format", + "(string, default NCHW) Only used in " + "An optional string from: \"NHWC\", \"NCHW\". " + "Defaults to \"NHWC\". Specify the data format of the output data, " + "the input will be transformed automatically. ") + .SetDefault("AnyLayout"); + // TODO(dzhwinter): need to registered layout transform function + AddAttr("workspace_size_MB", + "Used in cudnn kernel only. workspace size for cudnn, in MB, " + "workspace is a section of GPU memory which will be " + "allocated/freed each time the operator runs, larger " + "workspace size can increase performance but also requires " + "better hardward. This size should be carefully setted.") + .SetDefault(4096); AddComment(R"DOC( Convolution3D Transpose Operator. @@ -205,6 +260,23 @@ void ConvTransposeOpGrad::InferShape(framework::InferShapeContext* ctx) const { } } +framework::OpKernelType ConvTransposeOpGrad::GetExpectedKernelType( + const framework::ExecutionContext& ctx) const { + bool use_cudnn = ctx.Attr("use_cudnn"); + framework::LibraryType library_; + if (use_cudnn) { + library_ = framework::LibraryType::kCUDNN; + } else { + library_ = framework::LibraryType::kPlain; + } + + std::string data_format = ctx.Attr("data_format"); + framework::DataLayout layout_ = framework::StringToDataLayout(data_format); + return framework::OpKernelType( + framework::ToDataType(ctx.Input("Input")->type()), ctx.GetPlace(), + layout_, library_); +} + } // namespace operators } // namespace paddle diff --git a/paddle/operators/conv_transpose_op.h b/paddle/operators/conv_transpose_op.h index 4c8f8a80672788e8b2919e500d3627adec1ad035..a42ade41b165d1bfa00d2db0e45d40cf5d7b00bc 100644 --- a/paddle/operators/conv_transpose_op.h +++ b/paddle/operators/conv_transpose_op.h @@ -42,12 +42,20 @@ class ConvTransposeOp : public framework::OperatorWithKernel { public: using framework::OperatorWithKernel::OperatorWithKernel; void InferShape(framework::InferShapeContext* ctx) const override; + + protected: + framework::OpKernelType GetExpectedKernelType( + const framework::ExecutionContext& ctx) const override; }; class ConvTransposeOpGrad : public framework::OperatorWithKernel { public: using framework::OperatorWithKernel::OperatorWithKernel; void InferShape(framework::InferShapeContext* ctx) const override; + + protected: + framework::OpKernelType GetExpectedKernelType( + const framework::ExecutionContext& ctx) const override; }; template diff --git a/paddle/operators/detail/CMakeLists.txt b/paddle/operators/detail/CMakeLists.txt index f6bdc63cc2cfae526fe911ee4d989675452d5c5d..571a75c9dcd903672d460f192bf28ddbeaea7c78 100644 --- a/paddle/operators/detail/CMakeLists.txt +++ b/paddle/operators/detail/CMakeLists.txt @@ -1 +1 @@ -grpc_library(sendrecvop_grpc SRCS recv_impl.cc send_impl.cc PROTO send_recv.proto DEPS lod_tensor selected_rows) +grpc_library(sendrecvop_grpc SRCS sendrecvop_utils.cc grpc_client.cc grpc_server.cc PROTO send_recv.proto DEPS lod_tensor selected_rows) diff --git a/paddle/operators/detail/grpc_client.cc b/paddle/operators/detail/grpc_client.cc new file mode 100644 index 0000000000000000000000000000000000000000..5a4db2d7e686ce84abef620f890be8f3aa82cb73 --- /dev/null +++ b/paddle/operators/detail/grpc_client.cc @@ -0,0 +1,147 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include "grpc_client.h" +namespace paddle { +namespace operators { +namespace detail { + +bool RPCClient::AsyncSendVariable(const std::string& ep, + const platform::DeviceContext& ctx, + const framework::Scope& scope, + const std::string& var_name, + int64_t time_out) { + sendrecv::VariableMessage req; + auto* var = scope.FindVar(var_name); + SerializeToMessage(var_name, var, ctx, &req); + + // varhandle + VarHandle var_h; + var_h.ep = ep; + var_h.scope = &scope; + var_h.name = var_name; + var_h.ctx = &ctx; + + // stub context + auto ch = GetChannel(ep); + SendProcessor* s = new SendProcessor(ch); + s->Prepare(var_h, time_out); + s->response_call_back_ = NULL; + + auto rpc = s->stub_->AsyncSendVariable(s->context_.get(), req, &cq_); + rpc->Finish(&s->reply_, &s->status_, (void*)s); + + req_count_++; + + return true; +} + +void ProcGetResponse(const VarHandle& var_h, + const sendrecv::VariableMessage& ret_msg) { + auto* outvar = var_h.scope->FindVar(var_h.name); + + std::istringstream iss(ret_msg.serialized()); + DeserializeFromMessage(ret_msg, *var_h.ctx, outvar); +} + +bool RPCClient::AsyncGetVariable(const std::string& ep, + const platform::DeviceContext& ctx, + const framework::Scope& scope, + const std::string& var_name, + int64_t time_out) { + sendrecv::VariableMessage req; + req.set_varname(var_name); + + auto* var = scope.FindVar(var_name); + SerializeToMessage(var_name, var, ctx, &req); + + // varhandle + VarHandle var_h; + var_h.ep = ep; + var_h.scope = &scope; + var_h.name = var_name; + var_h.ctx = &ctx; + + // stub context + auto ch = GetChannel(ep); + GetProcessor* s = new GetProcessor(ch); + s->Prepare(var_h, time_out); + s->response_call_back_ = ProcGetResponse; + + auto rpc = s->stub_->AsyncGetVariable(s->context_.get(), req, &cq_); + rpc->Finish(&s->reply_, &s->status_, (void*)s); + + req_count_++; + + return true; +} + +bool RPCClient::wait() { + bool ok = true; + + while (true) { + if (req_count_ <= 0) { + break; + } + + if (!Proceed()) { + LOG(ERROR) << "Get meets CompletionQueue error"; + return false; + } + } + + return ok; +} + +bool RPCClient::Proceed() { + void* tag = NULL; + bool ok = false; + + // request counts. + if (!cq_.Next(&tag, &ok)) { + return false; + } + req_count_--; + + GPR_ASSERT(ok); + PADDLE_ENFORCE(tag); + + // TODO(gongwb): add more retries. + ClientBase* c = static_cast(tag); + if (!c->status_.ok()) { + delete c; + return true; + } + + c->Process(); + delete c; + return true; +} + +std::shared_ptr RPCClient::GetChannel(const std::string& ep) { + auto it = channels_.find(ep); + if (it != channels_.end()) { + return it->second; + } + + auto ch = std::shared_ptr( + grpc::CreateChannel(ep, grpc::InsecureChannelCredentials())); + + channels_[ep] = ch; + return ch; +} + +} // namespace detail +} // namespace operators +} // namespace paddle diff --git a/paddle/operators/detail/grpc_client.h b/paddle/operators/detail/grpc_client.h new file mode 100644 index 0000000000000000000000000000000000000000..d27b5ced9ece67f9b9da3b7f87ec231477603580 --- /dev/null +++ b/paddle/operators/detail/grpc_client.h @@ -0,0 +1,147 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#pragma once + +#include +#include +#include +#include +#include +#include +#include +#include +#include +#include + +#include "paddle/framework/data_type.h" +#include "paddle/framework/lod_tensor.h" +#include "paddle/framework/scope.h" +#include "paddle/framework/selected_rows.h" +#include "paddle/operators/detail/sendrecvop_utils.h" +#include "paddle/operators/detail/simple_block_queue.h" + +namespace paddle { +namespace operators { +namespace detail { + +struct VarHandle { + std::string ep; + const platform::DeviceContext* ctx; + const framework::Scope* scope; + std::string name; + + std::string String() const { + std::ostringstream s; + s << "name:[" << name << "] ep:[" << ep << "]"; + return s.str(); + } +}; + +void ProcGetResponse(const VarHandle& var_h, + const sendrecv::VariableMessage& msg); + +class ClientBase { + public: + explicit ClientBase(std::shared_ptr ch) { + stub_ = sendrecv::SendRecvService::NewStub(ch); + context_ = NULL; + } + + virtual ~ClientBase() {} + + virtual void Prepare(const VarHandle& var_info, int64_t time_out) { + context_.reset(new grpc::ClientContext()); + var_h_ = var_info; + + std::chrono::system_clock::time_point deadline = + std::chrono::system_clock::now() + std::chrono::milliseconds(time_out); + + context_->set_deadline(deadline); + } + + virtual void Process() = 0; + + std::unique_ptr stub_; + std::unique_ptr context_; + grpc::Status status_; + VarHandle var_h_; +}; + +typedef std::function + RequestSendCallBack; + +class SendProcessor : public ClientBase { + public: + explicit SendProcessor(std::shared_ptr ch) : ClientBase(ch) {} + + virtual ~SendProcessor() {} + + virtual void Process() { + if (response_call_back_) { + response_call_back_(var_h_, reply_); + } + } + + sendrecv::VoidMessage reply_; + RequestSendCallBack response_call_back_ = NULL; +}; + +typedef std::function + RequestGetCallBack; + +class GetProcessor : public ClientBase { + public: + explicit GetProcessor(std::shared_ptr ch) : ClientBase(ch) {} + + virtual ~GetProcessor() {} + + virtual void Process() { + if (response_call_back_) { + response_call_back_(var_h_, reply_); + } + } + + sendrecv::VariableMessage reply_; + RequestGetCallBack response_call_back_ = ProcGetResponse; +}; + +class RPCClient { + public: + bool AsyncSendVariable(const std::string& ep, + const platform::DeviceContext& ctx, + const framework::Scope& scope, + const std::string& var_name, + int64_t time_out = 600 * 1000); + + bool AsyncGetVariable(const std::string& ep, + const platform::DeviceContext& ctx, + const framework::Scope& scope, + const std::string& var_name, + int64_t time_out = 600 * 1000); + bool wait(); + + private: + bool Proceed(); + std::shared_ptr GetChannel(const std::string& ep); + + private: + grpc::CompletionQueue cq_; + std::map> channels_; + int64_t req_count_ = 0; +}; + +} // namespace detail +} // namespace operators +} // namespace paddle diff --git a/paddle/operators/detail/grpc_server.cc b/paddle/operators/detail/grpc_server.cc new file mode 100644 index 0000000000000000000000000000000000000000..e8d561a57ff59e9221400241f881cb26fb6c6f06 --- /dev/null +++ b/paddle/operators/detail/grpc_server.cc @@ -0,0 +1,237 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include "paddle/operators/detail/grpc_server.h" + +using grpc::ServerAsyncResponseWriter; + +namespace paddle { +namespace operators { +namespace detail { + +enum CallStatus { PROCESS = 0, FINISH }; + +// reference: +// https://stackoverflow.com/questions/41732884/grpc-multiple-services-in-cpp-async-server +class RequestBase { + public: + explicit RequestBase(sendrecv::SendRecvService::AsyncService* service, + grpc::ServerCompletionQueue* cq) + : service_(service), cq_(cq), status_(PROCESS) {} + virtual ~RequestBase() {} + virtual void Process() { assert(false); } + + CallStatus Status() { return status_; } + void SetStatus(CallStatus status) { status_ = status; } + + protected: + grpc::ServerContext ctx_; + sendrecv::SendRecvService::AsyncService* service_; + grpc::ServerCompletionQueue* cq_; + CallStatus status_; +}; + +typedef std::pair MessageWithName; + +class RequestSend final : public RequestBase { + public: + explicit RequestSend(sendrecv::SendRecvService::AsyncService* service, + grpc::ServerCompletionQueue* cq, + SimpleBlockQueue* queue) + : RequestBase(service, cq), queue_(queue), responder_(&ctx_) { + service_->RequestSendVariable(&ctx_, &request_, &responder_, cq_, cq_, + this); + } + + virtual ~RequestSend() {} + + virtual void Process() { + MessageWithName msg_with_name = + std::make_pair(request_.varname(), std::move(request_)); + queue_->Push(std::move(msg_with_name)); + // TODO(gongwb): check var's info. + responder_.Finish(reply_, grpc::Status::OK, this); + } + + protected: + sendrecv::VariableMessage request_; + sendrecv::VoidMessage reply_; + SimpleBlockQueue* queue_; + ServerAsyncResponseWriter responder_; +}; + +class RequestGet final : public RequestBase { + public: + explicit RequestGet(sendrecv::SendRecvService::AsyncService* service, + grpc::ServerCompletionQueue* cq, framework::Scope* scope) + : RequestBase(service, cq), responder_(&ctx_), scope_(scope) { + service_->RequestGetVariable(&ctx_, &request_, &responder_, cq_, cq_, this); + } + + virtual ~RequestGet() {} + + virtual void Process() { + // proc request. + std::string var_name = request_.varname(); + auto* var = scope_->FindVar(var_name); + SerializeToMessage(var_name, var, platform::CPUDeviceContext(), &reply_); + // TODO(gongwb): check var's info. + responder_.Finish(reply_, grpc::Status::OK, this); + } + + protected: + sendrecv::VariableMessage request_; + sendrecv::VariableMessage reply_; + ServerAsyncResponseWriter responder_; + framework::Scope* scope_; +}; + +void AsyncGRPCServer::RunSyncUpdate() { + grpc::ServerBuilder builder; + builder.AddListeningPort(address_, grpc::InsecureServerCredentials()); + builder.RegisterService(&service_); + + cq_send_ = builder.AddCompletionQueue(); + cq_get_ = builder.AddCompletionQueue(); + server_ = builder.BuildAndStart(); + LOG(INFO) << "Server listening on " << address_ << std::endl; + + std::function send_register = + std::bind(&AsyncGRPCServer::TryToRegisterNewSendOne, this); + std::function get_register = + std::bind(&AsyncGRPCServer::TryToRegisterNewGetOne, this); + + t_send_.reset( + new std::thread(std::bind(&AsyncGRPCServer::HandleRequest, this, false, + cq_send_.get(), "cq_send", send_register))); + + t_get_.reset( + new std::thread(std::bind(&AsyncGRPCServer::HandleRequest, this, true, + cq_get_.get(), "cq_get", get_register))); + + // wait server + server_->Wait(); + t_send_->join(); + t_get_->join(); +} + +void AsyncGRPCServer::ShutdownQueue() { + std::unique_lock lock(cq_mutex_); + cq_send_->Shutdown(); + cq_get_->Shutdown(); + is_shut_down_ = true; +} + +// This URL explains why shutdown is complicate: +// https://stackoverflow.com/questions/35708348/grpc-what-is-the-recommended-way-to-shut-down-an-asynchronous-server-in-c +void AsyncGRPCServer::ShutDown() { + server_->Shutdown(); + ShutdownQueue(); +} + +void AsyncGRPCServer::TryToRegisterNewSendOne() { + std::unique_lock lock(cq_mutex_); + if (is_shut_down_) { + return; + } + RequestSend* send = + new RequestSend(&service_, cq_send_.get(), &var_recv_queue_); + VLOG(4) << "create RequestSend status:" << send->Status(); +} + +void AsyncGRPCServer::TryToRegisterNewGetOne() { + std::unique_lock lock(cq_mutex_); + if (is_shut_down_) { + return; + } + RequestGet* get = new RequestGet(&service_, cq_get_.get(), scope_); + VLOG(4) << "create Requestget status:" << get->Status(); +} + +void AsyncGRPCServer::SetFinishOrDelete(RequestBase*& last) { + std::unique_lock lock(cq_mutex_); + if (is_shut_down_) { + delete last; + last = NULL; + return; + } + + last->SetStatus(FINISH); + return; +} + +void AsyncGRPCServer::HandleRequest(bool wait, grpc::ServerCompletionQueue* cq, + std::string cq_name, + std::function TryToRegisterNewOne) { + TryToRegisterNewOne(); + + void* tag = NULL; + bool ok = false; + while (true) { + if (!cq->Next(&tag, &ok)) { + LOG(INFO) << cq_name << " get CompletionQueue shutdown!"; + break; + } + + if (wait && !done_) { + Wait(); + } + + RequestBase* base = (RequestBase*)tag; + if (!ok) { + VLOG(4) << cq_name << " recv no regular event"; + TryToRegisterNewOne(); + delete base; + continue; + } + + switch (base->Status()) { + case PROCESS: { + VLOG(4) << cq_name << " status:" << base->Status(); + TryToRegisterNewOne(); + base->Process(); + SetFinishOrDelete(base); + break; + } + case FINISH: { + VLOG(4) << cq_name << " status:" << base->Status(); + delete base; + break; + } + default: { assert(false); } + } + } +} + +void AsyncGRPCServer::Wait() { + std::unique_lock lock(this->mutex_); + condition_.wait(lock, [=] { return this->done_ == true; }); +} + +void AsyncGRPCServer::Reset() { + std::lock_guard lock(this->mutex_); + done_ = false; +} + +void AsyncGRPCServer::Done() { + { + std::lock_guard lock(this->mutex_); + done_ = true; + } + condition_.notify_all(); +} + +} // namespace detail +} // namespace operators +} // namespace paddle diff --git a/paddle/operators/detail/grpc_server.h b/paddle/operators/detail/grpc_server.h new file mode 100644 index 0000000000000000000000000000000000000000..041fe05b2e9c37e8a91669b8f523c47b56e14cba --- /dev/null +++ b/paddle/operators/detail/grpc_server.h @@ -0,0 +1,91 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#pragma once + +#include "paddle/framework/lod_tensor.h" +#include "paddle/framework/scope.h" +#include "paddle/framework/selected_rows.h" +#include "paddle/framework/var_type.h" +#include "paddle/operators/detail/simple_block_queue.h" + +#include "paddle/operators/detail/send_recv.grpc.pb.h" +#include "paddle/operators/detail/send_recv.pb.h" + +#include +#include +#include +#include "paddle/operators/detail/sendrecvop_utils.h" + +namespace paddle { +namespace operators { +namespace detail { + +typedef std::pair MessageWithName; +class RequestBase; + +class AsyncGRPCServer final : public sendrecv::SendRecvService::Service { + public: + explicit AsyncGRPCServer(std::string address) { address_ = address; } + + void RunSyncUpdate(); + + void Reset(); + + void Done(); + + void SetScope(framework::Scope *scope) { scope_ = scope; } + + const MessageWithName Get() { return this->var_recv_queue_.Pop(); } + + void Push(const MessageWithName &msg) { this->var_recv_queue_.Push(msg); } + + void ShutDown(); + + protected: + void Wait(); + void HandleRequest(bool wait, grpc::ServerCompletionQueue *cq, + std::string cq_name, + std::function TryToRegisterNewOne); + void TryToRegisterNewSendOne(); + void TryToRegisterNewGetOne(); + void SetFinishOrDelete(RequestBase *&last); + void ShutdownQueue(); + + private: + std::mutex cq_mutex_; + volatile bool is_shut_down_ = false; + std::unique_ptr cq_send_; + std::unique_ptr cq_get_; + + sendrecv::SendRecvService::AsyncService service_; + std::unique_ptr server_; + + std::string address_; + framework::Scope *scope_; + // received variable from RPC, operators fetch variable from this queue. + SimpleBlockQueue var_recv_queue_; + + // condition of the sub program + std::mutex mutex_; + volatile mutable bool done_; + std::condition_variable condition_; + + std::unique_ptr t_send_; + std::unique_ptr t_get_; +}; + +}; // namespace detail +}; // namespace operators +}; // namespace paddle diff --git a/paddle/operators/detail/recv_impl.cc b/paddle/operators/detail/recv_impl.cc deleted file mode 100644 index 319404e56a5f3c407f313991240bbbb85fd39a2a..0000000000000000000000000000000000000000 --- a/paddle/operators/detail/recv_impl.cc +++ /dev/null @@ -1,65 +0,0 @@ -/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. - -Licensed under the Apache License, Version 2.0 (the "License"); -you may not use this file except in compliance with the License. -You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - -Unless required by applicable law or agreed to in writing, software -distributed under the License is distributed on an "AS IS" BASIS, -WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -See the License for the specific language governing permissions and -limitations under the License. */ - -#include "send_recv_impl.h" - -namespace paddle { -namespace operators { -namespace detail { - -Status SendRecvServerImpl::SendVariable(ServerContext *context, - const VariableMessage *in_var, - VoidMessage *out_var) { - MessageWithName msg_with_name = - std::make_pair(in_var->varname(), std::move(*in_var)); - var_recv_queue_.Push(std::move(msg_with_name)); - return Status::OK; -} - -Status SendRecvServerImpl::GetVariable(ServerContext *context, - const VariableMessage *in_var, - VariableMessage *out_var) { - std::string get_var_name = in_var->varname(); - auto *var = scope_->FindVar(get_var_name); - - SerializeToMessage(get_var_name, var, platform::CPUDeviceContext(), out_var); - return Status::OK; -} - -Status SendRecvServerImpl::Wait(ServerContext *context, - const VoidMessage *in_var, - VoidMessage *out_var) { - { - std::unique_lock lock(this->mutex_); - condition_.wait(lock, [=] { return this->done_ == true; }); - } - return Status::OK; -} - -void SendRecvServerImpl::Reset() { - std::lock_guard lock(this->mutex_); - done_ = false; -} - -void SendRecvServerImpl::Done() { - { - std::lock_guard lock(this->mutex_); - done_ = true; - } - condition_.notify_all(); -} - -} // namespace detail -} // namespace operators -} // namespace paddle diff --git a/paddle/operators/detail/send_impl.cc b/paddle/operators/detail/send_impl.cc deleted file mode 100644 index ae85cf2cec2cd8e046c0c7fd3408f2212f225819..0000000000000000000000000000000000000000 --- a/paddle/operators/detail/send_impl.cc +++ /dev/null @@ -1,67 +0,0 @@ -/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. - -Licensed under the Apache License, Version 2.0 (the "License"); -you may not use this file except in compliance with the License. -You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - -Unless required by applicable law or agreed to in writing, software -distributed under the License is distributed on an "AS IS" BASIS, -WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -See the License for the specific language governing permissions and -limitations under the License. */ - -#include "send_recv_impl.h" - -namespace paddle { -namespace operators { -namespace detail { - -bool RPCClient::SendVariable(const framework::Scope& scope, - const std::string& inname) { - ClientContext context; - VariableMessage msg; - VoidMessage out_msg; - // FIXME(typhoonzero): pass device context to here. - auto ctx = platform::CPUDeviceContext(); - auto* var = scope.FindVar(inname); - PADDLE_ENFORCE(var); - SerializeToMessage(inname, var, ctx, &msg); - - Status status = stub_->SendVariable(&context, msg, &out_msg); - if (!status.ok()) { - LOG(ERROR) << "gRPC error: " << status.error_message(); - return false; - } - return true; -} - -bool RPCClient::GetVariable(const framework::Scope& scope, - const std::string& outname) { - ClientContext context; - VariableMessage call_msg, ret_msg; - call_msg.set_varname(outname); - auto ctx = platform::CPUDeviceContext(); - Status status = stub_->GetVariable(&context, call_msg, &ret_msg); - auto* outvar = scope.FindVar(outname); - if (!status.ok()) { - LOG(ERROR) << "gRPC error: " << status.error_message(); - return false; - } - - std::istringstream iss(ret_msg.serialized()); - DeserializeFromMessage(ret_msg, ctx, outvar); - - return true; -} - -void RPCClient::Wait() { - ClientContext context; - VoidMessage call_msg, ret_msg; - stub_->Wait(&context, call_msg, &ret_msg); -} - -} // namespace detail -} // namespace operators -} // namespace paddle diff --git a/paddle/operators/detail/send_recv.proto b/paddle/operators/detail/send_recv.proto index f141c755ce14ef540aeab32c11c289179aff3f8c..8f962b4c69cc83dc2ab98b7dc27e18bc4b42bf18 100644 --- a/paddle/operators/detail/send_recv.proto +++ b/paddle/operators/detail/send_recv.proto @@ -21,8 +21,6 @@ service SendRecvService { rpc SendVariable(VariableMessage) returns (VoidMessage) {} // Argument VariableMessage for GetVariable should only contain varname. rpc GetVariable(VariableMessage) returns (VariableMessage) {} - // wait for one execution of the program - rpc Wait(VoidMessage) returns (VoidMessage) {} } // VariableMessage is serialized paddle variable message. diff --git a/paddle/operators/detail/send_recv_impl.h b/paddle/operators/detail/send_recv_impl.h deleted file mode 100644 index 1fe54f1f0536aed7d41bbdeeca076534abafe98d..0000000000000000000000000000000000000000 --- a/paddle/operators/detail/send_recv_impl.h +++ /dev/null @@ -1,141 +0,0 @@ -/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. - -Licensed under the Apache License, Version 2.0 (the "License"); -you may not use this file except in compliance with the License. -You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - -Unless required by applicable law or agreed to in writing, software -distributed under the License is distributed on an "AS IS" BASIS, -WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -See the License for the specific language governing permissions and -limitations under the License. */ - -#pragma once - -#include "paddle/framework/lod_tensor.h" -#include "paddle/framework/scope.h" -#include "paddle/framework/selected_rows.h" -#include "paddle/framework/var_type.h" -#include "paddle/operators/detail/simple_block_queue.h" - -#include "paddle/operators/detail/send_recv.grpc.pb.h" -#include "paddle/operators/detail/send_recv.pb.h" - -#include - -using grpc::Channel; -using grpc::Server; -using grpc::ServerContext; -using grpc::ServerReader; -using grpc::ServerBuilder; - -using grpc::ClientContext; -using grpc::ClientReader; -using grpc::ClientReaderWriter; -using grpc::ClientWriter; -using grpc::Status; -using sendrecv::SendRecvService; -using sendrecv::VariableMessage; -using sendrecv::VoidMessage; - -namespace paddle { -namespace operators { -namespace detail { - -typedef std::pair MessageWithName; - -class SendRecvServerImpl final : public SendRecvService::Service { - public: - explicit SendRecvServerImpl() {} - - Status SendVariable(ServerContext *context, const VariableMessage *in_var, - VoidMessage *out_var) override; - Status GetVariable(ServerContext *context, const VariableMessage *in_var, - VariableMessage *out_var) override; - Status Wait(ServerContext *context, const VoidMessage *in_var, - VoidMessage *out_var) override; - void Reset(); - void Done(); - void SetScope(framework::Scope *scope) { scope_ = scope; }; - - const MessageWithName Get() { return this->var_recv_queue_.Pop(); } - - void Push(const MessageWithName &msg) { this->var_recv_queue_.Push(msg); } - - private: - // received variable from RPC, operators fetch variable from this queue. - SimpleBlockQueue var_recv_queue_; - framework::Scope *scope_; - // condition of the sub program - std::mutex mutex_; - bool done_; - std::condition_variable condition_; -}; - -// RPCClient is a class to send tensors to pserver sub-network -// using different hashing methods. -class RPCClient { - public: - RPCClient(std::shared_ptr channel) - : stub_(SendRecvService::NewStub(channel)) {} - - bool SendVariable(const framework::Scope &scope, const std::string &inname); - bool GetVariable(const framework::Scope &scope, const std::string &outname); - void Wait(); - - private: - std::unique_ptr stub_; -}; - -inline void SerializeToMessage(const std::string &name, - const framework::Variable *var, - const platform::DeviceContext &ctx, - VariableMessage *msg) { - msg->set_varname(name); - std::ostringstream oss; - switch (framework::ToVarType(var->Type())) { - case framework::proto::VarDesc_VarType_LOD_TENSOR: - msg->set_type(sendrecv::VarType::LOD_TENSOR); - framework::SerializeToStream(oss, var->Get(), ctx); - break; - case framework::proto::VarDesc_VarType_SELECTED_ROWS: - msg->set_type(sendrecv::VarType::SELECTED_ROWS); - framework::SerializeToStream(oss, var->Get(), - ctx); - break; - default: { - PADDLE_THROW("Serialize does not support type: %s", - typeid(var->Type()).name()); - break; - } - } - msg->set_serialized(oss.str()); -} - -inline void DeserializeFromMessage(const VariableMessage &msg, - const platform::DeviceContext &ctx, - framework::Variable *var) { - using namespace paddle::framework::proto; - std::istringstream iss(msg.serialized()); - switch (msg.type()) { - case sendrecv::VarType::LOD_TENSOR: - DeserializeFromStream(iss, var->GetMutable(), ctx); - break; - case sendrecv::VarType::SELECTED_ROWS: { - DeserializeFromStream(iss, var->GetMutable(), - ctx); - break; - } - default: { - PADDLE_THROW("Deserialize does not support type: %s", - typeid(var->Type()).name()); - break; - } - } -} - -} // namespace detail -} // namespace operators -} // namespace paddle diff --git a/paddle/operators/detail/sendrecvop_utils.cc b/paddle/operators/detail/sendrecvop_utils.cc new file mode 100644 index 0000000000000000000000000000000000000000..7635b9e8dbdff624bb42a9de346b8d05a980f9b6 --- /dev/null +++ b/paddle/operators/detail/sendrecvop_utils.cc @@ -0,0 +1,68 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include "paddle/operators/detail/sendrecvop_utils.h" + +namespace paddle { +namespace operators { +namespace detail { + +void SerializeToMessage(const std::string& name, const framework::Variable* var, + const platform::DeviceContext& ctx, + sendrecv::VariableMessage* msg) { + msg->set_varname(name); + std::ostringstream oss; + switch (framework::ToVarType(var->Type())) { + case framework::proto::VarDesc_VarType_LOD_TENSOR: + msg->set_type(sendrecv::VarType::LOD_TENSOR); + framework::SerializeToStream(oss, var->Get(), ctx); + break; + case framework::proto::VarDesc_VarType_SELECTED_ROWS: + msg->set_type(sendrecv::VarType::SELECTED_ROWS); + framework::SerializeToStream(oss, var->Get(), + ctx); + break; + default: { + PADDLE_THROW("Serialize does not support type: %s", + typeid(var->Type()).name()); + break; + } + } + msg->set_serialized(oss.str()); +} + +void DeserializeFromMessage(const sendrecv::VariableMessage& msg, + const platform::DeviceContext& ctx, + framework::Variable* var) { + std::istringstream iss(msg.serialized()); + switch (msg.type()) { + case sendrecv::VarType::LOD_TENSOR: + DeserializeFromStream(iss, var->GetMutable(), ctx); + break; + case sendrecv::VarType::SELECTED_ROWS: { + DeserializeFromStream(iss, var->GetMutable(), + ctx); + break; + } + default: { + PADDLE_THROW("Deserialize does not support type: %s", + typeid(var->Type()).name()); + break; + } + } +} + +} // namespace detail +} // namespace operators +} // namespace paddle diff --git a/paddle/operators/detail/sendrecvop_utils.h b/paddle/operators/detail/sendrecvop_utils.h new file mode 100644 index 0000000000000000000000000000000000000000..bc6581afab93c626c7c2439d699c6c2d858df9fa --- /dev/null +++ b/paddle/operators/detail/sendrecvop_utils.h @@ -0,0 +1,42 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#pragma once +#include +#include +#include + +#include "paddle/framework/data_type.h" +#include "paddle/framework/lod_tensor.h" +#include "paddle/framework/scope.h" +#include "paddle/framework/selected_rows.h" +#include "paddle/framework/var_type.h" + +#include "paddle/operators/detail/send_recv.grpc.pb.h" +#include "paddle/operators/detail/send_recv.pb.h" + +namespace paddle { +namespace operators { +namespace detail { + +void SerializeToMessage(const std::string& name, const framework::Variable* var, + const platform::DeviceContext& ctx, + sendrecv::VariableMessage* msg); + +void DeserializeFromMessage(const sendrecv::VariableMessage& msg, + const platform::DeviceContext& ctx, + framework::Variable* var); +} // namespace detail +} // namespace operators +} // namespace paddle diff --git a/paddle/operators/edit_distance_op.cc b/paddle/operators/edit_distance_op.cc new file mode 100644 index 0000000000000000000000000000000000000000..e383f07fa9b53a3def10f6405a0d36f48f52ff08 --- /dev/null +++ b/paddle/operators/edit_distance_op.cc @@ -0,0 +1,98 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include "paddle/operators/edit_distance_op.h" + +namespace paddle { +namespace operators { + +class EditDistanceOp : public framework::OperatorWithKernel { + public: + using framework::OperatorWithKernel::OperatorWithKernel; + + void InferShape(framework::InferShapeContext *ctx) const override { + PADDLE_ENFORCE(ctx->HasInput("Hyps"), "Input(Hyps) shouldn't be null."); + PADDLE_ENFORCE(ctx->HasInput("Refs"), "Input(Refs) shouldn't be null."); + PADDLE_ENFORCE(ctx->HasOutput("Out"), "Output(Out) shouldn't be null."); + auto hyp_dims = ctx->GetInputDim("Hyps"); + auto ref_dims = ctx->GetInputDim("Refs"); + PADDLE_ENFORCE(hyp_dims.size() == 2 && hyp_dims[1] == 1, + "Input(Hyps) must be a 2-D LoDTensor with the 2nd dimension " + "equal to 1."); + PADDLE_ENFORCE(ref_dims.size() == 2 && ref_dims[1] == 1, + "Input(Refs) must be a 2-D LoDTensor with the 2nd dimension " + "equal to 1."); + ctx->SetOutputDim("Out", ctx->GetInputDim("Refs")); + } + + protected: + framework::OpKernelType GetExpectedKernelType( + const framework::ExecutionContext &ctx) const override { + return framework::OpKernelType(framework::proto::DataType::FP32, + ctx.device_context()); + } +}; + +class EditDistanceOpMaker : public framework::OpProtoAndCheckerMaker { + public: + EditDistanceOpMaker(OpProto *proto, OpAttrChecker *op_checker) + : OpProtoAndCheckerMaker(proto, op_checker) { + AddInput("Hyps", + "(2-D LoDTensor, 2nd dim. equal to 1) " + "The indices for hypothesis strings."); + AddInput("Refs", + "(2-D LoDTensor, 2nd dim. equal to 1) " + "The indices for reference strings."); + AddAttr("normalized", + "(bool, default false) Indicated whether to normalize " + "the edit distance by the length of reference string.") + .SetDefault(false); + AddOutput("Out", + "(2-D Tensor with shape [`batch_size` x 1]) " + "The output edit distances of EditDistance operator."); + AddComment(R"DOC( + +EditDistance operator computes the edit distances between a batch of hypothesis +strings and their references. + +Edit distance, also called Levenshtein distance, measures how dissimilar two strings +are by counting the minimum number of operations to transform one string into anthor. +Here the operations include insertion, deletion, and substitution. For example, +given hypothesis string A = "kitten" and reference B = "sitting", the edit distance +is 3 for A will be transformed into B at least after two substitutions and one +insertion: + + "kitten" -> "sitten" -> "sittin" -> "sitting" + +Input(Hyps) is a LoDTensor consisting of all the hypothesis strings with the total +number denoted by `batch_size`, and the separation is specified by the LoD information. +And the `batch_size` reference strings are arranged in order in the same way in the +LoDTensor Input(Refs). + +Output(Out) contains the `batch_size` results and each stands for the edit stance +for a pair of strings respectively. If Attr(normalized) is true, the edit distance +will be divided by the length of reference string. +)DOC"); + } +}; + +} // namespace operators +} // namespace paddle + +namespace ops = paddle::operators; + +REGISTER_OPERATOR(edit_distance, ops::EditDistanceOp, ops::EditDistanceOpMaker, + paddle::framework::EmptyGradOpMaker); +REGISTER_OP_CPU_KERNEL( + edit_distance, ops::EditDistanceKernel); diff --git a/paddle/operators/edit_distance_op.cu b/paddle/operators/edit_distance_op.cu new file mode 100644 index 0000000000000000000000000000000000000000..cf5ebc5c38fd006d10de790e45e9bff3409bd20c --- /dev/null +++ b/paddle/operators/edit_distance_op.cu @@ -0,0 +1,149 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include +#include "paddle/framework/op_registry.h" +#include "paddle/platform/cuda_helper.h" +#include "paddle/platform/gpu_info.h" + +namespace paddle { +namespace operators { + +using platform::PADDLE_CUDA_NUM_THREADS; + +template +__global__ void FillFirstRow(T* dist, const int N) { + int idx = blockDim.x * blockIdx.x + threadIdx.x; + if (idx < N + 1) { + dist[idx] = idx; + } +} + +template +__global__ void FillFirstColumn(T* dist, const int M, const int N) { + int idx = blockDim.x * blockIdx.x + threadIdx.x; + if (idx < M + 1) { + dist[idx * (N + 1)] = idx; + } +} + +template +__global__ void Levenshtein(T* dist, const int* x1, const int* x2, const int M, + const int N, const int start) { + int idx = blockDim.x * blockIdx.x + threadIdx.x; + int offset = N; + int index = start + idx * offset; + int row = index / (N + 1); + int col = index % (N + 1); + if (row > 0 && col > 0 && row < M + 1 && col < N + 1) { + int cost = x1[row - 1] == x2[col - 1] ? 0 : 1; + int dels = dist[(row - 1) * (N + 1) + col] + 1; + int ins = dist[row * (N + 1) + col - 1] + 1; + int subs = dist[(row - 1) * (N + 1) + (col - 1)] + cost; + dist[index] = min(dels, min(ins, subs)); + } +} + +template +__global__ void SetOutput(T* out, const T* dist, const int M, const int N, + bool normalized) { + int idx = blockDim.x * blockIdx.x + threadIdx.x; + if (idx == 0) { + out[0] = normalized ? dist[M * (N + 1) + N] / N : dist[M * (N + 1) + N]; + } +} + +template +class EditDistanceGPUKernel : public framework::OpKernel { + public: + void Compute(const framework::ExecutionContext& ctx) const { + auto* out_t = ctx.Output("Out"); + + auto* x1_t = ctx.Input("Hyps"); + auto* x2_t = ctx.Input("Refs"); + + auto normalized = ctx.Attr("normalized"); + auto stream = reinterpret_cast( + ctx.device_context()) + .stream(); + + auto hyp_lod = x1_t->lod()[0]; + auto ref_lod = x2_t->lod()[0]; + PADDLE_ENFORCE( + hyp_lod.size() == ref_lod.size(), + "Input(Hyps) and Input(Refs) must have the same batch size."); + for (size_t i = 1; i < ref_lod.size(); ++i) { + PADDLE_ENFORCE(ref_lod[i] > ref_lod[i - 1], + "Reference string %d is empty.", i); + } + + auto num_strs = hyp_lod.size() - 1; + out_t->Resize({static_cast(num_strs), 1}); + out_t->mutable_data(ctx.GetPlace()); + auto out = out_t->data(); + + T distance = 0.0; + for (size_t num = 0; num < num_strs; num++) { + auto m = static_cast(hyp_lod[num + 1] - hyp_lod[num]); + auto n = static_cast(ref_lod[num + 1] - ref_lod[num]); + if (m == 0 || n == 0) { + distance = std::max(m, n); + if (normalized) { + PADDLE_ENFORCE(n > 0, + "The reference string (#%d) cannot be empty " + "when Attr(normalized) is enabled.", + n); + distance = distance / n; + } + memory::Copy(boost::get(ctx.GetPlace()), out + num, + platform::CPUPlace(), &distance, sizeof(T), stream); + } else { + framework::Tensor dist_t; + dist_t.Resize({m + 1, n + 1}); + dist_t.mutable_data(ctx.GetPlace()); + auto dist = dist_t.data(); + auto x1 = x1_t->data() + hyp_lod[num]; + auto x2 = x2_t->data() + ref_lod[num]; + + FillFirstColumn<<<1 + m / PADDLE_CUDA_NUM_THREADS, + PADDLE_CUDA_NUM_THREADS, 0, stream>>>(dist, m, n); + + FillFirstRow<<<1 + n / PADDLE_CUDA_NUM_THREADS, + PADDLE_CUDA_NUM_THREADS, 0, stream>>>(dist, n); + // Compute the elements of distance matrix in the anti-diagonal diretion + for (int64_t slice = 2; slice < m + n + 1; ++slice) { + int z_m = slice < m + 1 ? 0 : slice - m; + int z_n = slice < n + 1 ? 0 : slice - n; + int size = slice - (z_m + z_n) + 1; // number of elments in the same + // anti-diagonal line to update + // the start index at which computes from + int start = slice < n + 1 ? slice : (z_n + 1) * (n + 1) - 1; + Levenshtein<<<1 + (size - 1) / PADDLE_CUDA_NUM_THREADS, + PADDLE_CUDA_NUM_THREADS, 0, stream>>>(dist, x1, x2, + m, n, start); + } + SetOutput<<<1, 1, 0, stream>>>(out + num, dist, m, n, normalized); + } + } + } +}; + +} // namespace operators +} // namespace paddle + +namespace ops = paddle::operators; + +REGISTER_OP_CUDA_KERNEL( + edit_distance, + ops::EditDistanceGPUKernel); diff --git a/paddle/operators/edit_distance_op.h b/paddle/operators/edit_distance_op.h new file mode 100644 index 0000000000000000000000000000000000000000..537e70281a5a750db480468a8f8e3c0465de6c5a --- /dev/null +++ b/paddle/operators/edit_distance_op.h @@ -0,0 +1,96 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#pragma once +#include +#include "paddle/framework/eigen.h" +#include "paddle/framework/op_registry.h" + +namespace paddle { +namespace operators { + +template +class EditDistanceKernel : public framework::OpKernel { + public: + void Compute(const framework::ExecutionContext& ctx) const { + auto* out_t = ctx.Output("Out"); + + auto* x1_t = ctx.Input("Hyps"); + auto* x2_t = ctx.Input("Refs"); + + auto normalized = ctx.Attr("normalized"); + + auto hyp_lod = x1_t->lod()[0]; + auto ref_lod = x2_t->lod()[0]; + PADDLE_ENFORCE( + hyp_lod.size() == ref_lod.size(), + "Input(Hyps) and Input(Refs) must have the same batch size."); + for (size_t i = 1; i < ref_lod.size(); ++i) { + PADDLE_ENFORCE(ref_lod[i] > ref_lod[i - 1], + "Reference string %d is empty.", i); + } + auto num_strs = hyp_lod.size() - 1; + + out_t->Resize({static_cast(num_strs), 1}); + out_t->mutable_data(ctx.GetPlace()); + auto out = out_t->data(); + + T distance = 0.0; + for (size_t num = 0; num < num_strs; ++num) { + auto m = static_cast(hyp_lod[num + 1] - hyp_lod[num]); + auto n = static_cast(ref_lod[num + 1] - ref_lod[num]); + + if (m == 0) { + distance = n; + } else if (n == 0) { + distance = m; + } else { + framework::Tensor dist_t; + dist_t.Resize({m + 1, n + 1}); + dist_t.mutable_data(ctx.GetPlace()); + auto dist = dist_t.data(); + auto x1 = x1_t->data() + hyp_lod[num]; + auto x2 = x2_t->data() + ref_lod[num]; + for (int64_t i = 0; i < m + 1; ++i) { + dist[i * (n + 1)] = i; + } + for (int64_t j = 0; j < n + 1; ++j) { + dist[j] = j; + } + for (int64_t i = 1; i < m + 1; ++i) { + for (int64_t j = 1; j < n + 1; ++j) { + int cost = x1[i - 1] == x2[j - 1] ? 0 : 1; + int dels = dist[(i - 1) * (n + 1) + j] + 1; + int ins = dist[i * (n + 1) + (j - 1)] + 1; + int subs = dist[(i - 1) * (n + 1) + (j - 1)] + cost; + dist[i * (n + 1) + j] = std::min(dels, std::min(ins, subs)); + } + } + distance = dist[m * (n + 1) + n]; + } + + if (normalized) { + PADDLE_ENFORCE(n > 0, + "The reference string (#%d) cannot be empty " + "when Attr(normalized) is enabled.", + n); + distance = distance / n; + } + out[num] = distance; + } + } +}; + +} // namespace operators +} // namespace paddle diff --git a/paddle/operators/elementwise_add_op.cc b/paddle/operators/elementwise_add_op.cc index 70b7c9f2ec11bf8ad56a24324a53792955edc77d..37951fa7587c8a200f4733e5a46575461f5026cd 100644 --- a/paddle/operators/elementwise_add_op.cc +++ b/paddle/operators/elementwise_add_op.cc @@ -21,7 +21,7 @@ class ElementwiseAddOpMaker : public ElementwiseOpMaker { public: ElementwiseAddOpMaker(OpProto* proto, OpAttrChecker* op_checker) : ElementwiseOpMaker(proto, op_checker) { - SetComment("Add", "$Out = X + Y$"); + SetComment("Add", "Out = X + Y"); AddComment(comment_); } }; diff --git a/paddle/operators/elementwise_div_op.cc b/paddle/operators/elementwise_div_op.cc index 1fa960866fa2066a351ef2e65a3c77cf8b6595f7..6ebd58b1b3dd79a465e70a24f7aab56261290bf6 100644 --- a/paddle/operators/elementwise_div_op.cc +++ b/paddle/operators/elementwise_div_op.cc @@ -21,7 +21,7 @@ class ElementwiseDivOpMaker : public ElementwiseOpMaker { public: ElementwiseDivOpMaker(OpProto* proto, OpAttrChecker* op_checker) : ElementwiseOpMaker(proto, op_checker) { - SetComment("Div", "$Out = X / Y$"); + SetComment("Div", "Out = X / Y"); AddComment(comment_); } }; diff --git a/paddle/operators/elementwise_mul_op.cc b/paddle/operators/elementwise_mul_op.cc index a6d11736194cb79bdc247c721acf8bda9c81dbe5..450dd05c796e22794315274b73398e85c8145940 100644 --- a/paddle/operators/elementwise_mul_op.cc +++ b/paddle/operators/elementwise_mul_op.cc @@ -22,7 +22,7 @@ class ElementwiseMulOpMaker : public ElementwiseOpMaker { public: ElementwiseMulOpMaker(OpProto* proto, OpAttrChecker* op_checker) : ElementwiseOpMaker(proto, op_checker) { - SetComment("Mul", "$Out = X \\odot\\ Y$"); + SetComment("Mul", "Out = X \\odot\\ Y"); AddComment(comment_); } }; diff --git a/paddle/operators/elementwise_op.h b/paddle/operators/elementwise_op.h index f308ee05e11210540e41cda4b9a896f9f96c4730..a342595b546bfca1a344cf8a549597df6a29adec 100644 --- a/paddle/operators/elementwise_op.h +++ b/paddle/operators/elementwise_op.h @@ -58,7 +58,8 @@ Limited Elementwise {name} Operator. The equation is: -{equation} +.. math:: + {equation} X is a tensor of any dimension and the dimensions of tensor Y must be smaller than or equal to the dimensions of X. @@ -71,15 +72,16 @@ For case 2: Y will be broadcasted to match the shape of X and axis should be the starting dimension index for broadcasting Y onto X. -example: - shape(X) = (2, 3, 4, 5), shape(Y) = (,) - shape(X) = (2, 3, 4, 5), shape(Y) = (5,) - shape(X) = (2, 3, 4, 5), shape(Y) = (4, 5) - shape(X) = (2, 3, 4, 5), shape(Y) = (3, 4), with axis=1 - shape(X) = (2, 3, 4, 5), shape(Y) = (2), with axis=0 +For example + .. code-block:: python -Both the input X and Y can carry the LoD (Level of Details) information, -or not. But the output only shares the LoD information with input X. + shape(X) = (2, 3, 4, 5), shape(Y) = (,) + shape(X) = (2, 3, 4, 5), shape(Y) = (5,) + shape(X) = (2, 3, 4, 5), shape(Y) = (4, 5) + shape(X) = (2, 3, 4, 5), shape(Y) = (3, 4), with axis=1 + shape(X) = (2, 3, 4, 5), shape(Y) = (2), with axis=0 + +Either of the inputs X and Y or none can carry the LoD (Level of Details) information. However, the output only shares the LoD information with input X. )DOC"; AddComment(comment_); diff --git a/paddle/operators/elementwise_sub_op.cc b/paddle/operators/elementwise_sub_op.cc index 2a8d0845b1800277a7d3cd6ff6c5c984e92197ee..d3c51f0a697b7cb07a46871cdba2e84e902fd0f2 100644 --- a/paddle/operators/elementwise_sub_op.cc +++ b/paddle/operators/elementwise_sub_op.cc @@ -21,7 +21,7 @@ class ElementwiseSubOpMaker : public ElementwiseOpMaker { public: ElementwiseSubOpMaker(OpProto* proto, OpAttrChecker* op_checker) : ElementwiseOpMaker(proto, op_checker) { - SetComment("Sub", "$Out = X - Y$"); + SetComment("Sub", "Out = X - Y"); AddComment(comment_); } }; diff --git a/paddle/operators/get_places_op.cc b/paddle/operators/get_places_op.cc index 291bbbcb3a736a0b0b7ac9cff211896ef1e7a49c..24fafb23074c358669715f1840246c3520f948c7 100644 --- a/paddle/operators/get_places_op.cc +++ b/paddle/operators/get_places_op.cc @@ -39,17 +39,19 @@ class GetPlacesOp : public framework::OperatorBase { : OperatorBase(type, inputs, outputs, attrs) {} void Run(const framework::Scope &scope, const platform::Place &place) const override { - std::string device_type = Attr("device_type"); + bool is_gpu; + if (Attr("device_type") == "AUTO") { + is_gpu = platform::is_gpu_place(place); + } else { + is_gpu = Attr("device_type") == "CUDA"; + } auto device_count = static_cast(Attr("device_count")); if (device_count == 0) { - if (device_type == "CUDA") { - device_count = CUDADevCount(); - } else if (device_type == "CPU") { - device_count = std::thread::hardware_concurrency(); - } + device_count = + is_gpu ? CUDADevCount() : std::thread::hardware_concurrency(); } PADDLE_ENFORCE_NE(device_count, 0, "Cannot indicate %s device count", - device_type); + is_gpu ? "GPU" : "CPU"); auto out_var_name = Output("Out"); auto &places = @@ -57,14 +59,14 @@ class GetPlacesOp : public framework::OperatorBase { "Output variable %s cannot be found", out_var_name) .GetMutable()); places.reserve(device_count); - if (device_type == "CUDA") { + if (is_gpu) { PADDLE_ENFORCE_LE(device_count, CUDADevCount(), "Only %d CUDA devices found, cannot set to %d", CUDADevCount(), device_count); for (size_t i = 0; i < device_count; ++i) { - places.emplace_back(platform::CUDAPlace(i)); + places.emplace_back(platform::CUDAPlace(static_cast(i))); } - } else if (device_type == "CPU") { + } else { for (size_t i = 0; i < device_count; ++i) { places.emplace_back(platform::CPUPlace()); } @@ -77,10 +79,10 @@ class GetPlacesOpProtoMaker : public framework::OpProtoAndCheckerMaker { GetPlacesOpProtoMaker(OpProto *proto, OpAttrChecker *op_checker) : OpProtoAndCheckerMaker(proto, op_checker) { AddOutput("Out", "vector of Place"); - AddAttr("device_count", "device count").SetDefault(1); - AddAttr("device_type", - R"(device type must be in ["CPU", "CUDA"])") - .InEnum({"CPU", "CUDA"}); + AddAttr("device_count", "device count").SetDefault(0); + AddAttr("device_type", "device type") + .InEnum({"CUDA", "CPU", "AUTO"}) + .SetDefault("AUTO"); AddComment(R"DOC( Returns a list of places based on flags. The list will be used for parallel execution. @@ -111,4 +113,5 @@ class GetPlacesInferShape : public framework::InferShapeBase { namespace ops = paddle::operators; REGISTER_OPERATOR(get_places, ops::GetPlacesOp, ops::GetPlacesOpProtoMaker, - ops::GetPlacesInferVarType, ops::GetPlacesInferShape); + ops::GetPlacesInferVarType, ops::GetPlacesInferShape, + paddle::framework::EmptyGradOpMaker); diff --git a/paddle/operators/math/sequence2batch.cc b/paddle/operators/math/sequence2batch.cc index 88977be1f8c030741c3a3a8f07a4feeb1d8bb4d9..e459a42ca251a9fc79f745f48a118ce898a0f77e 100644 --- a/paddle/operators/math/sequence2batch.cc +++ b/paddle/operators/math/sequence2batch.cc @@ -13,6 +13,7 @@ See the License for the specific language governing permissions and limitations under the License. */ #include "paddle/operators/math/sequence2batch.h" +#include "paddle/operators/math/math_function.h" namespace paddle { namespace operators { diff --git a/paddle/operators/norm_op.cc b/paddle/operators/norm_op.cc index b198b76cd49ca7c05b047d42df149d2b1e461b8e..0eeafcaae0a01ed7090800ecb06708773ede67aa 100644 --- a/paddle/operators/norm_op.cc +++ b/paddle/operators/norm_op.cc @@ -39,7 +39,7 @@ class NormOpMaker : public framework::OpProtoAndCheckerMaker { "M = C * H * W"); AddComment(R"DOC( "Input shape: $(N, C, H, W)$ - Sclae shape: $(C, 1)$ + Scale shape: $(C, 1)$ Output shape: $(N, C, H, W)$ Where forward diff --git a/paddle/operators/norm_op.h b/paddle/operators/norm_op.h index 7bee48919e9fdf85595bbc7ad540ca45a1dbfe5c..5759d6f1f07d50d4c65c93578ba7d7916a2d9b4e 100644 --- a/paddle/operators/norm_op.h +++ b/paddle/operators/norm_op.h @@ -66,7 +66,7 @@ class NormKernel : public framework::OpKernel { context.GetPlace()); auto tmp = framework::EigenVector::Flatten(tmp_tensor); - // get colsum and sqrt , inverse + // get colsum and sqrt , inverse auto dim = Eigen::array({{0}}); tmp.device(*place) = x_square_batch_eigen.sum(dim); tmp.device(*place) = (tmp + epsilon).sqrt().inverse(); diff --git a/paddle/operators/parallel_do_op.cc b/paddle/operators/parallel_do_op.cc index a6bc70f4c89fb24cef5aefcb69b97fbaa9dc9d9c..e1bec0421e76143bef669a4f6fa373cdf01226b2 100644 --- a/paddle/operators/parallel_do_op.cc +++ b/paddle/operators/parallel_do_op.cc @@ -39,6 +39,7 @@ void SplitTensorAndMoveTensorToScopes( const std::vector &sub_scopes, const std::vector &places, const std::vector &names) { + PADDLE_ENFORCE_EQ(sub_scopes.size(), places.size()); for (auto &argu : names) { auto *var = scope.FindVar(argu); const auto &tensor = var->Get(); @@ -54,6 +55,15 @@ void SplitTensorAndMoveTensorToScopes( } } +void WaitOnPlaces(const std::vector places) { + platform::DeviceContextPool &pool = platform::DeviceContextPool::Instance(); + + for (auto &place : places) { + auto &dev_ctx = *pool.Get(place); + dev_ctx.Wait(); + } +} + class ParallelDoOp : public framework::OperatorBase { public: ParallelDoOp(const std::string &type, @@ -71,10 +81,7 @@ class ParallelDoOp : public framework::OperatorBase { auto *block = Attr(kParallelBlock); auto *program = block->Program(); - // TODO(tonyyang-svail): get places from input - std::vector places; - places.emplace_back(platform::CPUPlace()); - places.emplace_back(platform::CPUPlace()); + auto &places = scope.FindVar(Input(kPlaces))->Get(); auto &sub_scopes = *scope.FindVar(Output(kParallelScopes)) ->GetMutable>(); @@ -82,8 +89,22 @@ class ParallelDoOp : public framework::OperatorBase { sub_scopes.push_back(&scope.NewScope()); } + // split input SplitTensorAndMoveTensorToScopes(scope, sub_scopes, places, Inputs(kInputs)); + // copy parameter + for (auto ¶m : Inputs(kParameters)) { + PADDLE_ENFORCE(scope.FindVar(param)->IsType(), + "Only support parameter type as LoDTensor"); + auto &src = scope.FindVar(param)->Get(); + for (size_t i = 0; i < places.size(); ++i) { + auto &place = places[i]; + auto *sub_scope = sub_scopes[i]; + auto *dst = sub_scope->Var(param)->GetMutable(); + framework::Copy(src, place, dst); + } + } + WaitOnPlaces(places); std::vector> workers; workers.reserve(places.size()); @@ -93,12 +114,6 @@ class ParallelDoOp : public framework::OperatorBase { auto &place = places[place_idx]; auto *cur_scope = sub_scopes[place_idx]; - // copy parameter - // some version of boost lacks != for boost::variant - if (!(dev_ctx.GetPlace() == place)) { - PADDLE_THROW("Not Implemented"); - } - workers.emplace_back(framework::Async([program, cur_scope, place, block] { framework::Executor executor(place); executor.Run(*program, cur_scope, block->ID(), @@ -108,6 +123,7 @@ class ParallelDoOp : public framework::OperatorBase { for (auto &worker : workers) { worker.wait(); } + WaitOnPlaces(places); // merge output for (auto &o_name : Outputs(kOutputs)) { @@ -121,6 +137,7 @@ class ParallelDoOp : public framework::OperatorBase { scope.FindVar(o_name)->GetMutable(); lod_tensor_to_be_merged->MergeLoDTensor(lod_tensors, dev_ctx.GetPlace()); } + WaitOnPlaces(places); } }; @@ -161,15 +178,14 @@ class ParallelDoGradOp : public OperatorBase { auto &sub_scopes = scope.FindVar(Input(kParallelScopes)) ->Get>(); - // TODO(tonyyang-svail): get places from input - std::vector places; - places.emplace_back(platform::CPUPlace()); - places.emplace_back(platform::CPUPlace()); + auto &places = scope.FindVar(Input(kPlaces))->Get(); // feed output@grad SplitTensorAndMoveTensorToScopes(scope, sub_scopes, places, Inputs(framework::GradVarName(kOutputs))); + WaitOnPlaces(places); + // for debugging for (auto &s : Inputs(framework::GradVarName(kOutputs))) { VLOG(3) << s; VLOG(3) << scope.FindVar(s)->Get(); @@ -196,10 +212,11 @@ class ParallelDoGradOp : public OperatorBase { for (auto &worker : workers) { worker.wait(); } + WaitOnPlaces(places); // merge grad for (auto &s : Outputs(framework::GradVarName(kParameters))) { - VLOG(3) << s; + VLOG(3) << "merge grad " << s; auto &t = sub_scopes[0]->FindVar(s)->Get(); VLOG(3) << t; @@ -216,7 +233,8 @@ class ParallelDoGradOp : public OperatorBase { auto sum_op = framework::OpRegistry::CreateOp( "sum", {{"X", {s, s_buf}}}, {{"Out", {s}}}, framework::AttributeMap{}); - sum_op->Run(*sub_scopes[0], place); + sum_op->Run(*sub_scopes[0], places[0]); + WaitOnPlaces(places); } VLOG(3) << t; @@ -236,8 +254,10 @@ class ParallelDoGradOpDescMaker : public framework::SingleGradOpDescMaker { for (auto &input_param : this->InputNames()) { VLOG(3) << input_param; grad->SetInput(input_param, this->Input(input_param)); - grad->SetOutput(framework::GradVarName(input_param), - this->InputGrad(input_param, false)); + if (input_param != kPlaces) { + grad->SetOutput(framework::GradVarName(input_param), + this->InputGrad(input_param, false)); + } } for (auto &output_param : this->OutputNames()) { diff --git a/paddle/operators/pool_cudnn_op.cc b/paddle/operators/pool_cudnn_op.cc deleted file mode 100644 index 77407f5cdf7e4ef7b76c38ef8992517b4bd1c5fe..0000000000000000000000000000000000000000 --- a/paddle/operators/pool_cudnn_op.cc +++ /dev/null @@ -1,39 +0,0 @@ -/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. - -Licensed under the Apache License, Version 2.0 (the "License"); -you may not use this file except in compliance with the License. -You may obtain a copy of the License at - - http://www.apache.org/licenses/LICENSE-2.0 - -Unless required by applicable law or agreed to in writing, software -distributed under the License is distributed on an "AS IS" BASIS, -WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. -See the License for the specific language governing permissions and -limitations under the License. */ - -#include "paddle/operators/pool_cudnn_op.h" - -namespace ops = paddle::operators; - -REGISTER_OP(pool2d_cudnn, ops::PoolOp, ops::Pool2dOpMaker, pool2d_cudnn_grad, - ops::PoolOpGrad); - -REGISTER_OP_CPU_KERNEL( - pool2d_cudnn, ops::PoolKernel, - ops::PoolKernel); -REGISTER_OP_CPU_KERNEL( - pool2d_cudnn_grad, - ops::PoolGradKernel, - ops::PoolGradKernel) - -REGISTER_OP(pool3d_cudnn, ops::PoolOp, ops::Pool3dOpMaker, pool3d_cudnn_grad, - ops::PoolOpGrad); - -REGISTER_OP_CPU_KERNEL( - pool3d_cudnn, ops::PoolKernel, - ops::PoolKernel); -REGISTER_OP_CPU_KERNEL( - pool3d_cudnn_grad, - ops::PoolGradKernel, - ops::PoolGradKernel) diff --git a/paddle/operators/pool_cudnn_op.cu.cc b/paddle/operators/pool_cudnn_op.cu.cc index 2d0001ba1184c99d9fc642f60c97ba89cec97ccd..446fb0819d98e0eb3d81bb202a67c55a23fc06b6 100644 --- a/paddle/operators/pool_cudnn_op.cu.cc +++ b/paddle/operators/pool_cudnn_op.cu.cc @@ -12,7 +12,8 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */ -#include "paddle/operators/pool_cudnn_op.h" +#include "paddle/framework/op_registry.h" +#include "paddle/operators/pool_op.h" #include "paddle/platform/cudnn_helper.h" namespace paddle { @@ -25,7 +26,7 @@ using DataLayout = platform::DataLayout; using PoolingMode = platform::PoolingMode; template -class PoolCudnnOpKernel : public framework::OpKernel { +class PoolCUDNNOpKernel : public framework::OpKernel { public: void Compute(const framework::ExecutionContext &ctx) const override { PADDLE_ENFORCE(platform::is_gpu_place(ctx.GetPlace()), @@ -86,7 +87,7 @@ class PoolCudnnOpKernel : public framework::OpKernel { }; template -class PoolCudnnGradOpKernel : public framework::OpKernel { +class PoolCUDNNGradOpKernel : public framework::OpKernel { public: void Compute(const framework::ExecutionContext &ctx) const override { PADDLE_ENFORCE(platform::is_gpu_place(ctx.GetPlace()), @@ -162,12 +163,16 @@ class PoolCudnnGradOpKernel : public framework::OpKernel { namespace ops = paddle::operators; -REGISTER_OP_CUDA_KERNEL(pool2d_cudnn, ops::PoolCudnnOpKernel, - ops::PoolCudnnOpKernel); -REGISTER_OP_CUDA_KERNEL(pool2d_cudnn_grad, ops::PoolCudnnGradOpKernel, - ops::PoolCudnnGradOpKernel); - -REGISTER_OP_CUDA_KERNEL(pool3d_cudnn, ops::PoolCudnnOpKernel, - ops::PoolCudnnOpKernel); -REGISTER_OP_CUDA_KERNEL(pool3d_cudnn_grad, ops::PoolCudnnGradOpKernel, - ops::PoolCudnnGradOpKernel); +REGISTER_OP_KERNEL(pool2d, CUDNN, ::paddle::platform::CUDAPlace, + ops::PoolCUDNNOpKernel, + ops::PoolCUDNNOpKernel); +REGISTER_OP_KERNEL(pool2d_grad, CUDNN, ::paddle::platform::CUDAPlace, + ops::PoolCUDNNGradOpKernel, + ops::PoolCUDNNGradOpKernel); + +REGISTER_OP_KERNEL(pool3d, CUDNN, ::paddle::platform::CUDAPlace, + ops::PoolCUDNNOpKernel, + ops::PoolCUDNNOpKernel); +REGISTER_OP_KERNEL(pool3d_grad, CUDNN, ::paddle::platform::CUDAPlace, + ops::PoolCUDNNGradOpKernel, + ops::PoolCUDNNGradOpKernel); diff --git a/paddle/operators/pool_op.cc b/paddle/operators/pool_op.cc index d3cf5fa638c53dfdfacec153211f447a1e2fa3bf..3e567efd082ed913ce3c19f87c93a2868ebe8864 100644 --- a/paddle/operators/pool_op.cc +++ b/paddle/operators/pool_op.cc @@ -61,6 +61,23 @@ void PoolOp::InferShape(framework::InferShapeContext *ctx) const { ctx->ShareLoD("X", "Out"); } +framework::OpKernelType PoolOp::GetExpectedKernelType( + const framework::ExecutionContext &ctx) const { + bool use_cudnn = ctx.Attr("use_cudnn"); + framework::LibraryType library_; + if (use_cudnn) { + library_ = framework::LibraryType::kCUDNN; + } else { + library_ = framework::LibraryType::kPlain; + } + + std::string data_format = ctx.Attr("data_format"); + framework::DataLayout layout_ = framework::StringToDataLayout(data_format); + return framework::OpKernelType( + framework::ToDataType(ctx.Input("X")->type()), ctx.GetPlace(), + layout_, library_); +} + void PoolOpGrad::InferShape(framework::InferShapeContext *ctx) const { PADDLE_ENFORCE(ctx->HasInput("X"), "Input(X) must not be null."); PADDLE_ENFORCE(ctx->HasOutput(framework::GradVarName("X")), @@ -68,6 +85,23 @@ void PoolOpGrad::InferShape(framework::InferShapeContext *ctx) const { ctx->SetOutputDim(framework::GradVarName("X"), ctx->GetInputDim("X")); } +framework::OpKernelType PoolOpGrad::GetExpectedKernelType( + const framework::ExecutionContext &ctx) const { + bool use_cudnn = ctx.Attr("use_cudnn"); + framework::LibraryType library_; + if (use_cudnn) { + library_ = framework::LibraryType::kCUDNN; + } else { + library_ = framework::LibraryType::kPlain; + } + + std::string data_format = ctx.Attr("data_format"); + framework::DataLayout layout_ = framework::StringToDataLayout(data_format); + return framework::OpKernelType( + framework::ToDataType(ctx.Input("X")->type()), ctx.GetPlace(), + layout_, library_); +} + Pool2dOpMaker::Pool2dOpMaker(OpProto *proto, OpAttrChecker *op_checker) : OpProtoAndCheckerMaker(proto, op_checker) { AddInput( @@ -101,15 +135,27 @@ Pool2dOpMaker::Pool2dOpMaker(OpProto *proto, OpAttrChecker *op_checker) AddAttr>("strides", "(vector, default {1, 1}), strides(height, " "width) of pooling operator.") - .SetDefault({1, 1}); // TODO(Chengduo): Add checker. (Currently, + .SetDefault({1, 1}); + // TODO(Chengduo): Add checker. (Currently, // TypedAttrChecker don't support vector type.) AddAttr>( "paddings", "(vector, default {0,0}), paddings(height, width) of pooling " "operator." "If global_pooling = true, paddings and ksize will be ignored.") - .SetDefault({0, 0}); // TODO(Chengduo): Add checker. (Currently, - // TypedAttrChecker don't support vector type.) + .SetDefault({0, 0}); + AddAttr( + "use_cudnn", + "(bool, default false) Only used in cudnn kernel, need install cudnn") + .SetDefault(false); + AddAttr( + "data_format", + "(string, default NCHW) Only used in " + "An optional string from: \"NHWC\", \"NCHW\". " + "Defaults to \"NHWC\". Specify the data format of the output data, " + "the input will be transformed automatically. ") + .SetDefault("AnyLayout"); + // TODO(dzhwinter): need to registered layout transform function AddComment(R"DOC( Pool2d Operator. @@ -182,6 +228,19 @@ Pool3dOpMaker::Pool3dOpMaker(OpProto *proto, OpAttrChecker *op_checker) .SetDefault({0, 0, 0}); // TODO(Chengduo): Add checker. (Currently, // TypedAttrChecker don't support vector type.) + AddAttr( + "use_cudnn", + "(bool, default false) Only used in cudnn kernel, need install cudnn") + .SetDefault(false); + AddAttr( + "data_format", + "(string, default NCHW) Only used in " + "An optional string from: \"NHWC\", \"NCHW\". " + "Defaults to \"NHWC\". Specify the data format of the output data, " + "the input will be transformed automatically. ") + .SetDefault("AnyLayout"); + // TODO(dzhwinter): need to registered layout transform function + AddComment(R"DOC( Pool3d Operator. diff --git a/paddle/operators/pool_op.h b/paddle/operators/pool_op.h index 3860e295f4b4dbeb2d60cfb304847de39083f1e1..c3d82ecbdeb412f0234fcddc27361d79b58c7122 100644 --- a/paddle/operators/pool_op.h +++ b/paddle/operators/pool_op.h @@ -29,6 +29,10 @@ class PoolOp : public framework::OperatorWithKernel { using framework::OperatorWithKernel::OperatorWithKernel; void InferShape(framework::InferShapeContext* ctx) const override; + + protected: + framework::OpKernelType GetExpectedKernelType( + const framework::ExecutionContext& ctx) const override; }; class PoolOpGrad : public framework::OperatorWithKernel { @@ -36,6 +40,10 @@ class PoolOpGrad : public framework::OperatorWithKernel { using framework::OperatorWithKernel::OperatorWithKernel; void InferShape(framework::InferShapeContext* ctx) const override; + + protected: + framework::OpKernelType GetExpectedKernelType( + const framework::ExecutionContext& ctx) const override; }; class Pool2dOpMaker : public framework::OpProtoAndCheckerMaker { diff --git a/paddle/operators/print_op.cc b/paddle/operators/print_op.cc new file mode 100644 index 0000000000000000000000000000000000000000..89e41d806c7661a3e61e0a944a2a980704297dd9 --- /dev/null +++ b/paddle/operators/print_op.cc @@ -0,0 +1,206 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + + Licensed under the Apache License, Version 2.0 (the "License"); + you may not use this file except in compliance with the License. + You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + + Unless required by applicable law or agreed to in writing, software + distributed under the License is distributed on an "AS IS" BASIS, + WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + See the License for the specific language governing permissions and + limitations under the License. */ + +#include +#include + +#include "paddle/framework/op_registry.h" + +namespace paddle { +namespace operators { + +#define CLOG std::cout + +struct Formater { + std::string message; + std::string name; + std::vector dims; + std::type_index dtype{typeid(char)}; + framework::LoD lod; + int summarize; + void* data{nullptr}; + + void operator()(size_t size) { + PrintMessage(); + PrintName(); + PrintDims(); + PrintDtype(); + PrintLod(); + PrintData(size); + } + + private: + void PrintMessage() { CLOG << std::time(nullptr) << "\t" << message; } + void PrintName() { + if (!name.empty()) { + CLOG << "Tensor[" << name << "]" << std::endl; + } + } + void PrintDims() { + if (!dims.empty()) { + CLOG << "\tshape: ["; + for (auto i : dims) { + CLOG << i << ","; + } + CLOG << "]" << std::endl; + } + } + void PrintDtype() { + if (dtype.hash_code() != typeid(char).hash_code()) { + CLOG << "\tdtype: " << dtype.name() << std::endl; + } + } + void PrintLod() { + if (!lod.empty()) { + CLOG << "\tLoD: ["; + for (auto level : lod) { + CLOG << "[ "; + for (auto i : level) { + CLOG << i << ","; + } + CLOG << " ]"; + } + CLOG << "]" << std::endl; + } + } + + void PrintData(size_t size) { + PADDLE_ENFORCE_NOT_NULL(data); + // print float + if (dtype.hash_code() == typeid(float).hash_code()) { + Display(size); + } + if (dtype.hash_code() == typeid(double).hash_code()) { + Display(size); + } + if (dtype.hash_code() == typeid(int).hash_code()) { + Display(size); + } + if (dtype.hash_code() == typeid(int64_t).hash_code()) { + Display(size); + } + } + + template + void Display(size_t size) { + auto* d = (T*)data; + CLOG << "\tdata: "; + if (summarize != -1) { + summarize = std::min(size, (size_t)summarize); + for (int i = 0; i < summarize; i++) { + CLOG << d[i] << ","; + } + } else { + for (size_t i = 0; i < size; i++) { + CLOG << d[i] << ","; + } + } + CLOG << std::endl; + } +}; + +// TODO(ChunweiYan) there should be some other printers for TensorArray +class TensorPrintOp : public framework::OperatorBase { + public: + TensorPrintOp(const std::string& type, + const framework::VariableNameMap& inputs, + const framework::VariableNameMap& outputs, + const framework::AttributeMap& attrs) + : OperatorBase(type, inputs, outputs, attrs) {} + + TensorPrintOp(const TensorPrintOp& o) + : framework::OperatorBase( + static_cast(o)) { + PADDLE_THROW("Not implemented"); + } + + void Run(const framework::Scope& scope, + const platform::Place& place) const override { + // Only run the `first_n` times. + int first_n = Attr("first_n"); + if (first_n > 0 && ++times_ > first_n) return; + + PADDLE_ENFORCE(!Inputs("input").empty(), "input should be set"); + auto* input_var = scope.FindVar(Input("input")); + PADDLE_ENFORCE_NOT_NULL(input_var); + auto& tensor = input_var->Get(); + + // TODO(ChunweiYan) support GPU + PADDLE_ENFORCE(platform::is_cpu_place(tensor.place())); + + Formater formater; + if (Attr("print_tensor_name")) { + formater.name = Inputs("input").front(); + } + if (Attr("print_tensor_type")) { + formater.dtype = tensor.type(); + } + if (Attr("print_tensor_shape")) { + formater.dims.assign(tensor.dims()[0], + tensor.dims()[tensor.dims().size() - 1]); + } + if (Attr("print_tensor_lod")) { + formater.lod = tensor.lod(); + } + formater.summarize = Attr("summarize"); + formater.data = (void*)tensor.data(); + formater(tensor.numel()); + } + + private: + mutable int times_{0}; +}; + +class PrintOpProtoAndCheckMaker : public framework::OpProtoAndCheckerMaker { + public: + PrintOpProtoAndCheckMaker(OpProto* proto, OpAttrChecker* op_checker) + : OpProtoAndCheckerMaker(proto, op_checker) { + AddInput("input", "the tensor that will be displayed."); + AddAttr("first_n", "Only log `first_n` number of times."); + AddAttr("message", "A string message to print as a prefix."); + AddAttr("summarize", "Print this number of elements in the tensor."); + AddAttr("print_tensor_name", "Whether to print the tensor name."); + AddAttr("print_tensor_type", "Whether to print the tensor's dtype."); + AddAttr("print_tensor_shape", "Whether to print the tensor's shape."); + AddAttr("print_tensor_lod", "Whether to print the tensor's lod."); + AddComment(R"DOC( + Creates a print op that will print when a tensor is accessed. + + Wraps the tensor passed in so that whenever that a tensor is accessed, + the message `message` is printed, along with the current value of the + tensor `t`.)DOC"); + } +}; + +class InferShape : public framework::InferShapeBase { + public: + void operator()(framework::InferShapeContext* context) const override { + PADDLE_ENFORCE(context->HasInput("input"), "input should be set"); + } +}; + +class InferVarType : public framework::VarTypeInference { + public: + void operator()(const framework::OpDesc& op_desc, + framework::BlockDesc* block) const override {} +}; + +} // namespace operators +} // namespace paddle + +REGISTER_OPERATOR(print, paddle::operators::TensorPrintOp, + paddle::operators::PrintOpProtoAndCheckMaker, + paddle::operators::InferShape, + paddle::operators::InferVarType, + paddle::framework::EmptyGradOpMaker); diff --git a/paddle/operators/recv_op.cc b/paddle/operators/recv_op.cc index 9331c7b563491902b2824898766cacb9bfdee2d9..55b33343af43802e1b6b95a32603bfee806c9764 100644 --- a/paddle/operators/recv_op.cc +++ b/paddle/operators/recv_op.cc @@ -24,7 +24,8 @@ limitations under the License. */ #include "paddle/framework/lod_tensor.h" #include "paddle/framework/op_registry.h" #include "paddle/framework/proto_desc.h" -#include "paddle/operators/detail/send_recv_impl.h" +#include "paddle/operators/detail/grpc_server.h" +#include "paddle/operators/detail/sendrecvop_utils.h" #include "paddle/operators/detail/simple_block_queue.h" #define LISTEN_TERMINATE_MESSAGE "TERMINATE@RECV" @@ -32,6 +33,11 @@ limitations under the License. */ namespace paddle { namespace operators { +void RunServer(std::shared_ptr service) { + service->RunSyncUpdate(); + VLOG(4) << "RunServer thread end"; +} + static void CreateTensorFromMessageType(framework::Variable *var, sendrecv::VarType var_type) { if (var_type == sendrecv::VarType::LOD_TENSOR) { @@ -46,18 +52,6 @@ static void CreateTensorFromMessageType(framework::Variable *var, } } -void RunServer(Server **rpc_server, - std::shared_ptr service, - const std::string &server_address) { - ServerBuilder builder; - builder.AddListeningPort(server_address, grpc::InsecureServerCredentials()); - builder.RegisterService(service.get()); - std::unique_ptr server(builder.BuildAndStart()); - *rpc_server = server.get(); - LOG(INFO) << "Server listening on " << server_address; - server->Wait(); -} - class RecvOp : public framework::OperatorBase { public: RecvOp(const std::string &type, const framework::VariableNameMap &inputs, @@ -65,10 +59,9 @@ class RecvOp : public framework::OperatorBase { const framework::AttributeMap &attrs) : OperatorBase(type, inputs, outputs, attrs) { if (!rpc_service_) { - rpc_service_.reset(new detail::SendRecvServerImpl()); std::string endpoint = Attr("endpoint"); - server_thread_.reset( - new std::thread(RunServer, &rpc_server_, rpc_service_, endpoint)); + rpc_service_.reset(new detail::AsyncGRPCServer(endpoint)); + server_thread_.reset(new std::thread(RunServer, rpc_service_)); } } @@ -76,7 +69,7 @@ class RecvOp : public framework::OperatorBase { detail::MessageWithName term_msg; term_msg.first = LISTEN_TERMINATE_MESSAGE; rpc_service_->Push(term_msg); - rpc_server_->Shutdown(); + rpc_service_->ShutDown(); server_thread_->join(); } @@ -99,10 +92,12 @@ class RecvOp : public framework::OperatorBase { auto grad_list = Attr>("GradList"); auto trainer_count = Attr("Trainers"); size_t param_count = param_list.size(); + rpc_service_->Reset(); // TODO(typhoonzero): change this to a while_op for every cluster-batch. bool exit_flag = false; while (!exit_flag) { + // TODO(gognwb): simply this loop. // Get from multiple trainers, we don't care about order in which // the gradient arrives, just add suffix 0~n then average the gradient. for (size_t i = 0; i < param_count * trainer_count; ++i) { @@ -110,6 +105,7 @@ class RecvOp : public framework::OperatorBase { const detail::MessageWithName &v = rpc_service_->Get(); auto grad_var_name = v.first; if (grad_var_name == LISTEN_TERMINATE_MESSAGE) { + VLOG(4) << "received LISTEN_TERMINATE_MESSAGE and RunOp.Run() exit"; exit_flag = true; break; } @@ -118,10 +114,12 @@ class RecvOp : public framework::OperatorBase { if (it != grad_list.end()) { param_var_name = param_list[it - grad_list.begin()]; } else { - LOG(ERROR) << "grad have no paired param found!"; + LOG(ERROR) << "grad have no paired param found!\"" << grad_var_name + << "\""; } VLOG(3) << "recved grad: " << grad_var_name << " updating param: " << param_var_name; + auto *merged_grad = recv_scope.FindVar(grad_var_name); if (merged_grad == nullptr) { auto *ptr = recv_scope.Var(grad_var_name); @@ -141,9 +139,11 @@ class RecvOp : public framework::OperatorBase { auto &dev_ctx = *pool.Get(dev_place); detail::DeserializeFromMessage(v.second, dev_ctx, var); } + if (exit_flag) { break; } + rpc_service_->Reset(); std::string program_str = Attr("OptimizeProgram"); @@ -158,17 +158,14 @@ class RecvOp : public framework::OperatorBase { } catch (std::exception &e) { LOG(ERROR) << "run sub program error " << e.what(); } + rpc_service_->Done(); grads_counter_.clear(); } // while(true) } protected: - // grpc server instance to track status and gracefully shutdown. - // borrow an pointer from server thread. - Server *rpc_server_{nullptr}; - // grpc send/recv service implement to register. - std::shared_ptr rpc_service_; + std::shared_ptr rpc_service_; std::shared_ptr server_thread_; mutable std::unordered_map grads_counter_; }; diff --git a/paddle/operators/reorder_lod_tensor_by_rank_op.cc b/paddle/operators/reorder_lod_tensor_by_rank_op.cc index a055cdf7e8952995e57c28b3520c427caa75a4c1..3c30447949421da516213b47178828453671c693 100644 --- a/paddle/operators/reorder_lod_tensor_by_rank_op.cc +++ b/paddle/operators/reorder_lod_tensor_by_rank_op.cc @@ -26,22 +26,44 @@ class ReorderLoDTensorByRankTableOpProtoMaker ReorderLoDTensorByRankTableOpProtoMaker(OpProto *proto, OpAttrChecker *op_checker) : OpProtoAndCheckerMaker(proto, op_checker) { - AddInput("X", "(LoDTensor) the input lod tensor need to be reordered."); + AddInput("X", + "(LoDTensor), the input lod tensor to be reordered according to " + "Input(RankTable)."); AddInput("RankTable", - "(LoDRankTable) the rank table that input need follow"); - AddOutput("Out", "(LoDTensor) reordered lod tensor"); - AddComment(R"DOC(ReorderLoDTensorByRankTable + "(LoDRankTable), the rank table according to which Input(X) is " + "reordered."); + AddOutput("Out", "(LoDTensor), the reordered lod tensor."); + AddComment(R"DOC(ReorderLoDTensorByRankTable operator. -Reorder the input X by the rank of `RankTable`. If `RankTable` is ordered by -index [3, 0, 2, 1]. Input X will reorder its sequence, the third sequence of -X will be the first sequence of Output. - -NOTE: The RankTable does not need to be calculated by X. +Input(X) is a batch of sequences. Input(RankTable) stores new orders of the +input sequence batch. The reorder_lod_tensor_by_rank operator reorders the +Input(X) according to the information provided by Input(RankTable). For example: -The X = [Seq0, Seq1, Seq2, Seq3]. The indices of RankTable are [3, 0, 2, 1]. -The Out = [Seq3, Seq0, Seq2, Seq1] with correct LoD information. +If the indices stored in the Input(RankTable) are [3, 0, 2, 1], the +Input(X) will be reordered that the fourth sequence in Input(X) will become the +first one, and then followed by the original first, third, and the second one. + +This is: +X = [Seq0, Seq1, Seq2, Seq3]. The indices in RankTable are [3, 0, 2, 1]. +Out = [Seq3, Seq0, Seq2, Seq1] with a new LoD information. + +If the LoD information of Input(X) is empty, this means Input(X) is not sequence +data. This is also identical to a batch of sequences where each sequence has a +fixed length 1. In this case, the reorder_lod_tensor_by_rank operator reorders +each slice of Input(X) along the first axis according to Input(RankTable). + +This is: +X = [Slice0, Slice1, Slice2, Slice3] and its LoD information is empty. The +indices in RankTable are [3, 0, 2, 1]. +Out = [Slice3, Slice0, Slice2, Slice1] with no LoD information is appended. + +NOTE: This operator sorts Input(X) according to a given LoDRankTable which does +not need to be calculated according to Input(X). It can be calculated according +to another different sequence, and then this operator sorts Input(X) according +to the given LoDRankTable. + )DOC"); } }; diff --git a/paddle/operators/send_op.cc b/paddle/operators/send_op.cc index 95c207221a7b34732eca4cfd07fed0a8f1671981..4d145250bdc73607c8817e20fdb753f4c96e2391 100644 --- a/paddle/operators/send_op.cc +++ b/paddle/operators/send_op.cc @@ -19,59 +19,45 @@ limitations under the License. */ #include "paddle/framework/lod_tensor.h" #include "paddle/framework/op_registry.h" -#include "paddle/operators/detail/send_recv_impl.h" -#include "paddle/operators/detail/simple_block_queue.h" +#include +#include "paddle/operators/detail/grpc_client.h" namespace paddle { namespace operators { -// TODO(typhoonzero): this is a simple implementation which only send -// one tensor class SendOp : public framework::OperatorBase { public: - SendOp(const std::string &type, const framework::VariableNameMap &inputs, - const framework::VariableNameMap &outputs, - const framework::AttributeMap &attrs) - : OperatorBase(type, inputs, outputs, attrs) { - // init client when the operator is created at runtime. - std::vector endpoints = - Attr>("endpoints"); - for (auto ep : endpoints) { - client_map_[ep].reset(new detail::RPCClient( - grpc::CreateChannel(ep, grpc::InsecureChannelCredentials()))); - } - } + SendOp(const std::string& type, const framework::VariableNameMap& inputs, + const framework::VariableNameMap& outputs, + const framework::AttributeMap& attrs) + : OperatorBase(type, inputs, outputs, attrs) {} - void Run(const framework::Scope &scope, - const platform::Place &dev_place) const override { + void Run(const framework::Scope& scope, + const platform::Place& dev_place) const override { auto ins = Inputs("X"); auto outs = Outputs("Out"); std::vector epmap = Attr>("epmap"); - // TODO(typhoonzero): use async calls to send multiple variable asyncly. - for (size_t i = 0; i < ins.size(); ++i) { - bool ret = client_map_[epmap[i]]->SendVariable(scope, ins[i]); - if (!ret) { - LOG(ERROR) << "send variable error: " << ins[i]; - } + + // FIXME(gongwb): DeviceContext? + auto ctx = platform::CPUDeviceContext(); + for (size_t i = 0; i < ins.size(); i++) { + client_.AsyncSendVariable(epmap[i], ctx, scope, ins[i]); } - // TODO(typhoonzero): support async optimization - client_map_[epmap[0]]->Wait(); - for (size_t i = 0; i < outs.size(); ++i) { - bool ret = client_map_[epmap[i]]->GetVariable(scope, outs[i]); - if (!ret) { - LOG(ERROR) << "GetVariable error: " << outs[i]; - } + + for (size_t i = 0; i < outs.size(); i++) { + client_.AsyncGetVariable(epmap[i], ctx, scope, outs[i]); } + + client_.wait(); } - protected: - mutable std::unordered_map> - client_map_; + private: + mutable detail::RPCClient client_; }; class SendOpMaker : public framework::OpProtoAndCheckerMaker { public: - SendOpMaker(OpProto *proto, OpAttrChecker *op_checker) + SendOpMaker(OpProto* proto, OpAttrChecker* op_checker) : OpProtoAndCheckerMaker(proto, op_checker) { AddInput("X", "(Tensor) Input tensor to be send").AsDuplicable(); AddOutput("Out", "(Tensor) Output tensor to get from server") diff --git a/paddle/operators/send_recv_op_test.cc b/paddle/operators/send_recv_op_test.cc index fa94424bf9e8e719ec0822268685b0806a109d21..ea091694798475dfd9631910a750405be950c20c 100644 --- a/paddle/operators/send_recv_op_test.cc +++ b/paddle/operators/send_recv_op_test.cc @@ -140,7 +140,7 @@ void StartServerNet(bool is_sparse) { TEST(SendRecvOp, CPUDense) { std::thread server_thread(StartServerNet, false); - sleep(3); // wait server to start + sleep(10); // wait server to start // local net f::Scope scope; p::CPUPlace place; diff --git a/paddle/operators/sequence_erase_op.cc b/paddle/operators/sequence_erase_op.cc new file mode 100644 index 0000000000000000000000000000000000000000..d17b2686238b2d2f872331edfdbb095fb8693b87 --- /dev/null +++ b/paddle/operators/sequence_erase_op.cc @@ -0,0 +1,89 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include "paddle/operators/sequence_erase_op.h" + +namespace paddle { +namespace operators { + +class SequenceEraseOp : public framework::OperatorWithKernel { + public: + using framework::OperatorWithKernel::OperatorWithKernel; + + void InferShape(framework::InferShapeContext* ctx) const override { + PADDLE_ENFORCE(ctx->HasInput("X"), + "Input(X) of SequenceEraseOp should not be null."); + PADDLE_ENFORCE(ctx->HasOutput("Out"), + "Output(Out) of SequenceEraseOp should not be null."); + auto x_dims = ctx->GetInputDim("X"); + PADDLE_ENFORCE(x_dims.size() == 2 && x_dims[1] == 1, + "Input(X) of SequenceEraseOp should be a 2-D LoDTensor " + "with the 2nd dimension equal to 1."); + ctx->SetOutputDim("Out", x_dims); + } +}; + +class SequenceEraseOpMaker : public framework::OpProtoAndCheckerMaker { + public: + SequenceEraseOpMaker(OpProto* proto, OpAttrChecker* op_checker) + : OpProtoAndCheckerMaker(proto, op_checker) { + AddInput("X", + "(2-D LoDTensor with the 2nd dim. equal to 1) " + "Input LoDTensor of SequenceEraseOp."); + AddOutput("Out", + "(2-D LoDTensor with the 2nd dim. equal to 1) " + "Output LoDTensor of SequenceEraseOp."); + AddAttr>("tokens", + "(vector) Tokens need to be erased from " + "input sequences."); + AddComment(R"DOC( +Sequence Erase Operator. + +Sequence erase operator erases tokens specified by Attr(tokens) from the input +sequences Input(X), and outputs the remaining data and modifies the LoD +information at the same time. For example, given a 2-D LoDTensor + + X = [[2, 2, 6, 1, 3, 9, 6, 1, 0, 1]]^T + +with lod = [[0, 3, 6, 10]], there are three sequences in the input: + + X1 = [[2, 2, 6]]^T, X2 = [[1, 3, 9]]^T and X3 = [[6, 1, 0, 1]]^T. + +If the tokens to be erased are Attr(tokens) = [2, 3, 5], after the erasing +operation, the three sequences become + + X1' = [[6]]^T, X2' = [[1, 9]]^T and X3' = [[6, 1, 0, 1]]^T. + +Hence the LoDTensor Output(Out) should be + + Out = [[6, 1, 9, 6, 1, 0, 1]]^T, + +with lod = [[0, 1, 3, 7]]. + +An example usage for this operator is to remove the special tokens when +computing the edit distance between two strings, such as blank, start token, +and end token. +)DOC"); + } +}; + +} // namespace operators +} // namespace paddle + +namespace ops = paddle::operators; +REGISTER_OP_WITHOUT_GRADIENT(sequence_erase, ops::SequenceEraseOp, + ops::SequenceEraseOpMaker); +REGISTER_OP_CPU_KERNEL( + sequence_erase, + ops::SequenceEraseKernel); diff --git a/paddle/operators/sequence_erase_op.cu b/paddle/operators/sequence_erase_op.cu new file mode 100644 index 0000000000000000000000000000000000000000..5da8eba3e1ac1fb85dfc65c2fd801574599e02d9 --- /dev/null +++ b/paddle/operators/sequence_erase_op.cu @@ -0,0 +1,133 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#include +#include +#include "paddle/operators/sequence_erase_op.h" +#include "paddle/platform/cuda_helper.h" + +namespace paddle { +namespace operators { +using platform::PADDLE_CUDA_NUM_THREADS; +using LoDTensor = framework::LoDTensor; + +template +__global__ void LabelErasedIdx(const T* in_dat, const int in_len, + const T* tokens, const int tokens_len, + int* num_erased) { + int index = blockIdx.x * blockDim.x + threadIdx.x; + if (index < in_len) { + int erased = 0; + for (int i = 0; i < tokens_len; ++i) { + if (in_dat[index] == tokens[i]) { + erased = 1; + } + } + num_erased[index + 1] = erased; + if (index == 0) { + num_erased[0] = 0; + } + } +} + +template +__global__ void GetOutLod(const T* num_erased, const int* in_lod, + const int lod_len, int* out_lod0) { + int index = blockIdx.x * blockDim.x + threadIdx.x; + if (index < lod_len) { + out_lod0[index] = in_lod[index] - num_erased[in_lod[index]]; + } +} + +template +__global__ void SetOutput(const T* in_dat, const int in_len, + const int* num_erased, T* out_dat) { + int index = blockIdx.x * blockDim.x + threadIdx.x; + if (index < in_len) { + if (in_dat[index] != in_dat[index + 1]) { + out_dat[index - num_erased[index]] = in_dat[index]; + } + } +} + +template +class SequenceEraseOpCUDAKernel : public framework::OpKernel { + public: + void Compute(const framework::ExecutionContext& ctx) const override { + auto* in = ctx.Input("X"); + auto* out = ctx.Output("Out"); + + auto lod = in->lod(); + PADDLE_ENFORCE_EQ(lod.size(), 1UL, "Only support one level sequence now."); + PADDLE_ENFORCE_EQ(lod[0].back(), (size_t)in->numel(), + "The actual size mismatches with the LoD information."); + auto tokens = ctx.Attr>("tokens"); + auto tokens_len = tokens.size(); + auto in_len = in->numel(); + auto in_dat = in->data(); + auto lod0 = lod[0]; + + thrust::host_vector host_tokens(tokens_len); + for (size_t i = 0; i < tokens.size(); ++i) { + host_tokens[i] = tokens[i]; + } + thrust::device_vector dev_tokens = host_tokens; + thrust::device_vector num_erased(in_len + 1); + + T* dev_tokens_ptr = thrust::raw_pointer_cast(dev_tokens.data()); + int* num_erased_ptr = thrust::raw_pointer_cast(num_erased.data()); + + auto stream = ctx.cuda_device_context().stream(); + LabelErasedIdx<<<(in_len - 1) / PADDLE_CUDA_NUM_THREADS + 1, + PADDLE_CUDA_NUM_THREADS, 0, stream>>>( + in_dat, in_len, dev_tokens_ptr, tokens_len, num_erased_ptr); + thrust::inclusive_scan(num_erased.begin() + 1, num_erased.end(), + num_erased.begin() + 1); + + // Calc LoD + auto lod_len = lod0.size(); + thrust::host_vector host_lod(lod_len); + for (size_t i = 0; i < lod_len; ++i) { + host_lod[i] = lod0[i]; + } + thrust::device_vector dev_in_lod = host_lod; + thrust::device_vector dev_out_lod(lod_len); + int* dev_in_lod_ptr = thrust::raw_pointer_cast(dev_in_lod.data()); + int* dev_out_lod_ptr = thrust::raw_pointer_cast(dev_out_lod.data()); + GetOutLod<<<(lod_len - 1) / PADDLE_CUDA_NUM_THREADS + 1, + PADDLE_CUDA_NUM_THREADS, 0, stream>>>( + num_erased_ptr, dev_in_lod_ptr, lod_len, dev_out_lod_ptr); + thrust::host_vector host_out_lod = dev_out_lod; + std::vector out_lod0(lod_len, 0); + for (size_t i = 0; i < lod_len; i++) { + out_lod0[i] = host_out_lod[i]; + } + framework::LoD out_lod; + out_lod.push_back(out_lod0); + out->set_lod(out_lod); + + // Set output + out->Resize({out_lod0.back(), 1}); + auto out_dat = out->mutable_data(ctx.GetPlace()); + SetOutput<<<(in_len - 1) / PADDLE_CUDA_NUM_THREADS + 1, + PADDLE_CUDA_NUM_THREADS, 0, stream>>>(in_dat, in_len, + num_erased_ptr, out_dat); + } +}; + +} // namespace operators +} // namespace paddle + +REGISTER_OP_CUDA_KERNEL(sequence_erase, + paddle::operators::SequenceEraseOpCUDAKernel); diff --git a/paddle/operators/sequence_erase_op.h b/paddle/operators/sequence_erase_op.h new file mode 100644 index 0000000000000000000000000000000000000000..cb2d7be009dcbe0138818457249e95fbdd27fc0a --- /dev/null +++ b/paddle/operators/sequence_erase_op.h @@ -0,0 +1,70 @@ +/* Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserve. + +Licensed under the Apache License, Version 2.0 (the "License"); +you may not use this file except in compliance with the License. +You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + +Unless required by applicable law or agreed to in writing, software +distributed under the License is distributed on an "AS IS" BASIS, +WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +See the License for the specific language governing permissions and +limitations under the License. */ + +#pragma once + +#include "paddle/framework/op_registry.h" + +namespace paddle { +namespace operators { + +template +class SequenceEraseKernel : public framework::OpKernel { + public: + void Compute(const framework::ExecutionContext& ctx) const override { + auto* in = ctx.Input("X"); + auto* out = ctx.Output("Out"); + + auto lod = in->lod(); + PADDLE_ENFORCE_EQ(lod.size(), 1UL, "Only support one level sequence now."); + PADDLE_ENFORCE_EQ(lod[0].back(), (size_t)in->numel(), + "The actual size mismatches with the LoD information."); + auto tokens = ctx.Attr>("tokens"); + auto in_len = in->numel(); + auto in_dat = in->data(); + auto lod0 = lod[0]; + + std::vector num_erased(in_len + 1, 0); + std::vector out_lod0(1, 0); + for (size_t i = 0; i < lod0.size() - 1; ++i) { + size_t num_out = 0; + for (auto j = lod0[i] + 1; j <= lod0[i + 1]; ++j) { + num_erased[j] = num_erased[j - 1]; + if (std::find(tokens.begin(), tokens.end(), in_dat[j - 1]) != + tokens.end()) { + num_erased[j] += 1; + } else { + num_out += 1; + } + } + out_lod0.push_back(out_lod0.back() + num_out); + } + + auto out_len = in_len - num_erased[in_len]; + out->Resize({static_cast(out_len), 1}); + auto out_dat = out->mutable_data(ctx.GetPlace()); + + for (int64_t i = 0; i < in_len; ++i) { + if (num_erased[i] == num_erased[i + 1]) { + out_dat[i - num_erased[i]] = in_dat[i]; + } + } + framework::LoD out_lod; + out_lod.push_back(out_lod0); + out->set_lod(out_lod); + } +}; + +} // namespace operators +} // namespace paddle diff --git a/paddle/operators/shrink_rnn_memory_op.cc b/paddle/operators/shrink_rnn_memory_op.cc index 821754a0a632e15643eaeff4133174eb75c9700f..ade94b40bed91c64d3074036c067de34323bdaa7 100644 --- a/paddle/operators/shrink_rnn_memory_op.cc +++ b/paddle/operators/shrink_rnn_memory_op.cc @@ -12,6 +12,7 @@ WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */ #include "paddle/framework/lod_rank_table.h" +#include "paddle/framework/lod_tensor.h" #include "paddle/operators/array_operator.h" #include "paddle/operators/math/math_function.h" @@ -44,10 +45,23 @@ class ShrinkRNNMemoryOp : public ArrayOp { rank_items.begin(); auto *out_var = scope.FindVar(Output("Out")); - PADDLE_ENFORCE(out_var != nullptr, "Output Out must be set"); + PADDLE_ENFORCE(out_var != nullptr, "Output(Out) must be set."); auto &out_tensor = *out_var->GetMutable(); + + size_t height = dst_num_rows; + + // do shrink for the top level LoD + if (x_tensor.lod().size() > 0 && + x_tensor.lod()[0].size() > static_cast(dst_num_rows)) { + auto lod_offset = framework::GetSubLoDAndAbsoluteOffset(x_tensor.lod(), 0, + dst_num_rows, 0); + height = lod_offset.second.second; + auto out_lod = out_tensor.mutable_lod(); + framework::AppendLoD(out_lod, lod_offset.first); + } + if (dst_num_rows != 0) { - out_tensor.ShareDataWith(x_tensor.Slice(0, dst_num_rows)); + out_tensor.ShareDataWith(x_tensor.Slice(0, height)); } } }; @@ -62,15 +76,17 @@ class ShrinkRNNMemoryOpProtoMaker : public framework::OpProtoAndCheckerMaker { "(LoDTensor) The step index. The RNN step memory 'X' will be " "shrinked to match the size of the input of the index'th step."); AddOutput("Out", "(LoDTensor) The shrinked RNN step memory."); - AddComment( - R"DOC( - In dynamic RNN, we are able to handle sequences of different lengths. - Because of the multiple lengths, the size of each step input can be - different, which may lead to a mismatching between the input of - the current step and the memory generated by the previous one. This - operator shrinks memory according to the size of the next step input, - to make sure that they can match each other. - )DOC"); + AddComment(R"DOC( +This operator is used to shrink output batch of memory defined in dynamic RNN. + +Dynamic RNN is able to handle variable-length sequences, in which, sequences in +a mini-batch are sorted by their lengths first. After that, the longest sequence +becomes the first one in the sorted batch, followed by the second longest, the +third longest, and so on. Dynamic RNN then slices a batch input timestep by +timestep from the sorted input. Once any sequence in the input batch reaches its +end, memory defined in dynamicRNN has to shrink its outputs to adapt to the input +batch size for the next time step. +)DOC"); } }; @@ -132,6 +148,7 @@ class ShrinkRNNMemoryGradInferShape : public framework::InferShapeBase { PADDLE_ENFORCE(context->HasOutput(framework::GradVarName("X"))); context->SetOutputDim(framework::GradVarName("X"), context->GetInputDim("X")); + context->ShareLoD("X", framework::GradVarName("X")); } }; diff --git a/paddle/platform/dynload/cudnn.cc b/paddle/platform/dynload/cudnn.cc index 76ec82e10840751a654c7d7f57da8d5570d2a9ce..701f6240fef2e9df25472c0caf6177e7f1964cfd 100644 --- a/paddle/platform/dynload/cudnn.cc +++ b/paddle/platform/dynload/cudnn.cc @@ -44,7 +44,7 @@ CUDNN_DNN_ROUTINE_EACH_R7(DEFINE_WRAP); #ifdef PADDLE_USE_DSO bool HasCUDNN() { - std::call_once(cudnn_dso_flag, GetCudnnDsoHandle, &cudnn_dso_handle); + std::call_once(cudnn_dso_flag, GetCUDNNDsoHandle, &cudnn_dso_handle); return cudnn_dso_handle != nullptr; } diff --git a/paddle/platform/dynload/cudnn.h b/paddle/platform/dynload/cudnn.h index 8c937b37d714a06c623f4e204bd572fdd200ea5d..b92634794947f6979255d6241ff3a333f3771bfb 100644 --- a/paddle/platform/dynload/cudnn.h +++ b/paddle/platform/dynload/cudnn.h @@ -36,7 +36,7 @@ extern void EnforceCUDNNLoaded(const char* fn_name); auto operator()(Args... args) -> decltype(__name(args...)) { \ using cudnn_func = decltype(__name(args...)) (*)(Args...); \ std::call_once(cudnn_dso_flag, \ - paddle::platform::dynload::GetCudnnDsoHandle, \ + paddle::platform::dynload::GetCUDNNDsoHandle, \ &cudnn_dso_handle); \ EnforceCUDNNLoaded(#__name); \ void* p_##__name = dlsym(cudnn_dso_handle, #__name); \ diff --git a/paddle/platform/dynload/dynamic_loader.cc b/paddle/platform/dynload/dynamic_loader.cc index 7a82d06a0acbfa44386d40df97f6b0e43ed46577..c8c09ae608fa7cc67a54fada9cfe86b40096a9fd 100644 --- a/paddle/platform/dynload/dynamic_loader.cc +++ b/paddle/platform/dynload/dynamic_loader.cc @@ -134,7 +134,7 @@ void GetCublasDsoHandle(void** dso_handle) { #endif } -void GetCudnnDsoHandle(void** dso_handle) { +void GetCUDNNDsoHandle(void** dso_handle) { #if defined(__APPLE__) || defined(__OSX__) GetDsoHandleFromSearchPath(FLAGS_cudnn_dir, "libcudnn.dylib", dso_handle, false); diff --git a/paddle/platform/dynload/dynamic_loader.h b/paddle/platform/dynload/dynamic_loader.h index c0e5452e5ae723ec314ebafde86a6ff63980be00..7b0c8c16d7484480550f3c753fe52d1f04651900 100644 --- a/paddle/platform/dynload/dynamic_loader.h +++ b/paddle/platform/dynload/dynamic_loader.h @@ -32,7 +32,7 @@ void GetCublasDsoHandle(void** dso_handle); * @param **dso_handle dso handler * */ -void GetCudnnDsoHandle(void** dso_handle); +void GetCUDNNDsoHandle(void** dso_handle); /** * @brief load the DSO of CURAND diff --git a/paddle/pybind/pybind.cc b/paddle/pybind/pybind.cc index 5d170c66e97f56440968ba568167e6845631e1cc..c5d70bc9f91bc92b28a546cc79b08a9fda150050 100644 --- a/paddle/pybind/pybind.cc +++ b/paddle/pybind/pybind.cc @@ -430,13 +430,8 @@ All parameter, weight, gradient are variables in Paddle. m.def("init_glog", framework::InitGLOG); m.def("init_devices", &framework::InitDevices); - m.def("use_cpu", framework::UseCPU); - m.def("use_mkldnn", framework::UseMKLDNN); - m.def("use_cuda", framework::UseCUDA); - m.def("use_cudnn", framework::UseCUDNN); - m.def("use_all", framework::UseALL); - m.def("is_compile_gpu", IsCompileGPU); + m.def("set_feed_variable", framework::SetFeedVariable); m.def("get_fetch_variable", framework::GetFetchVariable); diff --git a/paddle/pybind/tensor_py.h b/paddle/pybind/tensor_py.h index 6b4290972bade585d1a0c2ae919a2e712bdf308c..3b5210e2b91dd697e213a0c847f73c6969cd654b 100644 --- a/paddle/pybind/tensor_py.h +++ b/paddle/pybind/tensor_py.h @@ -14,7 +14,7 @@ limitations under the License. */ #pragma once #include -#include "paddle/framework/tensor.h" +#include "paddle/framework/lod_tensor.h" #include "paddle/memory/memcpy.h" #include "paddle/platform/device_context.h" #include "pybind11/numpy.h" @@ -97,14 +97,27 @@ inline py::buffer_info CastToPyBuffer(framework::Tensor &tensor) { template T TensorGetElement(framework::Tensor &self, size_t offset) { - PADDLE_ENFORCE(platform::is_cpu_place(self.place())); - return self.data()[offset]; + if (platform::is_cpu_place(self.place())) { + return self.data()[offset]; + } else { + std::shared_ptr dst(new framework::Tensor); + framework::Copy(self, platform::CPUPlace(), dst.get()); + return dst->data()[offset]; + } } +// TODO(dzhwinter) : fix the redundent Tensor allocate and free template void TensorSetElement(framework::Tensor &self, size_t offset, T elem) { - PADDLE_ENFORCE(platform::is_cpu_place(self.place())); - self.data()[offset] = elem; + if (platform::is_gpu_place(self.place())) { + std::shared_ptr dst(new framework::Tensor); + framework::Copy(self, platform::CPUPlace(), dst.get()); + dst->data()[offset] = elem; + framework::Copy(*dst.get(), self.place(), &self); + + } else if (platform::is_cpu_place(self.place())) { + self.data()[offset] = elem; + } } template diff --git a/paddle/scripts/submit_local.sh.in b/paddle/scripts/submit_local.sh.in index 8a352b0078d701f797f7202c85bd0e08201ac9b8..80fa0c72af65cbdc21ba955389318a233e02657c 100755 --- a/paddle/scripts/submit_local.sh.in +++ b/paddle/scripts/submit_local.sh.in @@ -49,7 +49,18 @@ function cpu_config() { if [ "@WITH_MKL@" == "OFF" ]; then return 0 fi - ht=`lscpu |grep "per core"|awk -F':' '{print $2}'|xargs` + platform="`uname -s`" + ht=0 + if [ $platform == "Linux" ]; then + ht=`lscpu |grep "per core"|awk -F':' '{print $2}'|xargs` + elif [ $platform == "Darwin" ]; then + if [`sysctl -n hw.physicalcpu` -eq `sysctl -n hw.logicalcpu`]; then + # HT is OFF + ht=1 + fi + else + return 0 + fi if [ $ht -eq 1 ]; then # HT is OFF if [ -z "$KMP_AFFINITY" ]; then export KMP_AFFINITY="granularity=fine,compact,0,0" @@ -72,7 +83,15 @@ function threads_config() { # according to trainer_count and total processors # only when MKL enabled # auto set OPENBLAS_NUM_THREADS when do not use MKL - processors=`grep "processor" /proc/cpuinfo|sort -u|wc -l` + platform="`uname -s`" + processors=0 + if [ $platform == "Linux" ]; then + processors=`grep "processor" /proc/cpuinfo|sort -u|wc -l` + elif [ $platform == "Darwin" ]; then + processors=`sysctl -n hw.logicalcpu` + else + return 0 + fi trainers=`grep -Eo 'trainer_count.[0-9]+' <<< "$@" |grep -Eo '[0-9]+'|xargs` if [ -z $trainers ]; then trainers=1 @@ -92,6 +111,9 @@ function threads_config() { if [ -z "$OPENBLAS_NUM_THREADS" ]; then export OPENBLAS_NUM_THREADS=$threads fi + if [ $threads -gt 1 ] && [ -z "$OPENBLAS_MAIN_FREE" ]; then + export OPENBLAS_MAIN_FREE=1 + fi fi } @@ -145,11 +167,7 @@ else: sys.exit(0) EOF -if [ "`uname -s`" == "Linux" ]; then - # only support on linux yet, with mac can use v2 - cpu_config -fi - +cpu_config # echo $KMP_AFFINITY $OMP_DYNAMIC case "$1" in diff --git a/python/paddle/utils/dump_v2_config.py b/python/paddle/utils/dump_v2_config.py new file mode 100644 index 0000000000000000000000000000000000000000..5dc2111e379fd39b40e1e9bcf2e577b57b101a68 --- /dev/null +++ b/python/paddle/utils/dump_v2_config.py @@ -0,0 +1,62 @@ +# Copyright (c) 2016 PaddlePaddle Authors. All Rights Reserved +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +import collections + +from paddle.trainer_config_helpers.layers import LayerOutput +from paddle.v2.layer import parse_network +from paddle.proto import TrainerConfig_pb2 + +__all__ = ["dump_v2_config"] + + +def dump_v2_config(topology, save_path, binary=False): + """ Dump the network topology to a specified file. + + This function is only used to dump network defined by using PaddlePaddle V2 + APIs. This function will NOT dump configurations related to PaddlePaddle + optimizer. + + :param topology: The output layers (can be more than one layers given in a + Python List or Tuple) of the entire network. Using the + specified layers (if more than one layer is given) as root, + traversing back to the data layer(s), all the layers + connected to the specified output layers will be dumped. + Layers not connceted to the specified will not be dumped. + :type topology: LayerOutput|List|Tuple + :param save_path: The path to save the dumped network topology. + :type save_path: str + :param binary: Whether to dump the serialized network topology or not. + The default value is false. NOTE that, if you call this + function to generate network topology for PaddlePaddle C-API, + a serialized version of network topology is required. When + using PaddlePaddle C-API, this flag MUST be set to True. + :type binary: bool + """ + + if isinstance(topology, LayerOutput): + topology = [topology] + elif isinstance(topology, collections.Sequence): + for out_layer in topology: + assert isinstance(out_layer, LayerOutput), ( + "The type of each element in the parameter topology " + "should be LayerOutput.") + else: + raise RuntimeError("Error input type for parameter topology.") + + model_str = parse_network(topology) + with open(save_path, "w") as fout: + if binary: + fout.write(model_str.SerializeToString()) + else: + fout.write(str(model_str)) diff --git a/python/paddle/utils/merge_model.py b/python/paddle/utils/merge_model.py index 421e953d2775f145800cf7179ec644697a265060..2b100207728a8532e900992f7db4d3910e893dea 100644 --- a/python/paddle/utils/merge_model.py +++ b/python/paddle/utils/merge_model.py @@ -30,7 +30,8 @@ def merge_v2_model(net, param_file, output_file): which ends with .tar.gz. @param net The output layer of the network for inference. - @param param_file Path of the parameters (.tar.gz) which is stored by v2 api. + @param param_file Path of the parameters (.tar.gz) which is stored by + v2 api. @param output_file Path of the merged file which will be generated. Usage: diff --git a/python/paddle/v2/__init__.py b/python/paddle/v2/__init__.py index 0de417df2cb942ce46ff8ac3acc61ae4999ed634..df710c33d0c0ca16d358dac1eb42327e9cd4c7ae 100644 --- a/python/paddle/v2/__init__.py +++ b/python/paddle/v2/__init__.py @@ -62,12 +62,15 @@ __all__ = [ cp.begin_parse() -def set_omp_mkl_env_vars(trainer_count): +def set_env_vars(trainer_count): '''Auto set CPU environment if have not set before. - export KMP_AFFINITY, OMP_DYNAMIC according to the Hyper Threading status. - export OMP_NUM_THREADS, MKL_NUM_THREADS according to trainer_count. + For MKL: + export KMP_AFFINITY, OMP_DYNAMIC according to the Hyper Threading status. + export OMP_NUM_THREADS, MKL_NUM_THREADS according to trainer_count. + For OpenBLAS: + export OPENBLAS_NUM_THREADS, OPENBLAS_MAIN_FREE according to trainer_count. ''' - import platform + import platform, paddle if not platform.system() in ['Linux', 'Darwin']: return @@ -103,16 +106,22 @@ def set_omp_mkl_env_vars(trainer_count): num_cores = num_physical_cores() num_processors = num_logical_processors() - if num_processors > num_cores: # Hyper Threading is enabled - set_env("OMP_DYNAMIC", "true") - set_env("KMP_AFFINITY", "granularity=fine,compact,1,0") - else: - set_env("OMP_DYNAMIC", "false") - set_env("KMP_AFFINITY", "granularity=fine,compact,0,0") + if paddle.version.mkl() == 'ON': + if num_processors > num_cores: # Hyper Threading is enabled + set_env("OMP_DYNAMIC", "true") + set_env("KMP_AFFINITY", "granularity=fine,compact,1,0") + else: + set_env("OMP_DYNAMIC", "false") + set_env("KMP_AFFINITY", "granularity=fine,compact,0,0") threads = num_processors / trainer_count threads = '1' if threads < 1 else str(threads) - set_env("OMP_NUM_THREADS", threads) - set_env("MKL_NUM_THREADS", threads) + if paddle.version.mkl() == 'ON': + set_env("OMP_NUM_THREADS", threads) + set_env("MKL_NUM_THREADS", threads) + else: + set_env("OPENBLAS_NUM_THREADS", threads) + if threads > 1: + set_env("OPENBLAS_MAIN_FREE", '1') def init(**kwargs): @@ -129,7 +138,7 @@ def init(**kwargs): for key in args_dict.keys(): args.append('--%s=%s' % (key, str(args_dict[key]))) - set_omp_mkl_env_vars(kwargs.get('trainer_count', 1)) + set_env_vars(kwargs.get('trainer_count', 1)) if 'use_gpu' in kwargs: cp.g_command_config_args['use_gpu'] = kwargs['use_gpu'] diff --git a/python/paddle/v2/fluid/__init__.py b/python/paddle/v2/fluid/__init__.py index ccd5998e3592a1f5dc795ee24875c1aed230587e..ec5159fca161ed1912bc4145e732b7927833cc0b 100644 --- a/python/paddle/v2/fluid/__init__.py +++ b/python/paddle/v2/fluid/__init__.py @@ -23,9 +23,22 @@ from memory_optimization_transpiler import memory_optimize Tensor = LoDTensor __all__ = framework.__all__ + executor.__all__ + [ - 'io', 'initializer', 'layers', 'nets', 'optimizer', 'backward', - 'regularizer', 'LoDTensor', 'CPUPlace', 'CUDAPlace', 'Tensor', 'ParamAttr' - 'DataFeeder', 'clip', 'DistributeTranspiler', 'memory_optimize' + 'io', + 'initializer', + 'layers', + 'nets', + 'optimizer', + 'backward', + 'regularizer', + 'LoDTensor', + 'CPUPlace', + 'CUDAPlace', + 'Tensor', + 'ParamAttr' + 'DataFeeder', + 'clip', + 'DistributeTranspiler', + 'memory_optimize', ] @@ -58,7 +71,7 @@ def __bootstrap__(): read_env_flags = ['use_pinned_memory', 'check_nan_inf'] if core.is_compile_gpu(): - read_env_flags.append('fraction_of_gpu_memory_to_use') + read_env_flags += ['fraction_of_gpu_memory_to_use', 'op_sync'] core.init_gflags([sys.argv[0]] + ["--tryfromenv=" + ",".join(read_env_flags)]) core.init_glog(sys.argv[0]) diff --git a/python/paddle/v2/fluid/backward.py b/python/paddle/v2/fluid/backward.py index 8d0eb53b8e1ff6b0a05218c6d0c4e017a21b3fbb..43f6133a6534efb676dacea2e8b8d25846d91247 100644 --- a/python/paddle/v2/fluid/backward.py +++ b/python/paddle/v2/fluid/backward.py @@ -1,8 +1,12 @@ from paddle.v2.fluid import framework as framework from . import core import collections +import copy -__all__ = ['append_backward'] +__all__ = [ + 'append_backward', + 'calc_gradient', +] def _rename_arg_(op_descs, old_name, new_name, begin_idx=None, end_idx=None): @@ -65,6 +69,18 @@ def _all_in_set_(cands, s): return True +def _some_in_set_(cands, s): + """ + Test if some elements of 'cands' are in set 's' + """ + if len(cands) == 0: + return False + for c in cands: + if c in s: + return True + return False + + def _strip_grad_suffix_(name): """ Strip the grad suffix from the given varibale name @@ -169,8 +185,8 @@ def _remove_no_grad_branch_(op_descs, no_grad_set): return op_descs -def _append_backward_ops_(target, - block, +def _append_backward_ops_(block, + ops, target_block, no_grad_dict, grad_to_var, @@ -179,8 +195,8 @@ def _append_backward_ops_(target, Create all grad ops, and insert them into given block Args: - target(Variable): the target variable of forward pass block(Block): the block where forward ops are + ops(Op): the forward operators whose backward ops need to be added target_block(Block): the block which is going to hold new generated grad ops no_grad_dict(dict): key(int) block index @@ -202,14 +218,14 @@ def _append_backward_ops_(target, # grad_op_descs holds created grad_op, and will be appended to target_block grad_op_descs = [] program = block.program - for op in reversed(block.ops): + for op in reversed(ops): grad_sub_block_list = [] # If the op has its own sub-block, deal with the sub-block first if op.has_attr("sub_block"): sub_block = program.block(op.block_attr("sub_block")) grad_sub_block = program.create_block(parent_idx=sub_block.idx) - _append_backward_ops_(target, sub_block, grad_sub_block, - no_grad_dict, grad_to_var, callback) + _append_backward_ops_(sub_block, sub_block.ops, grad_sub_block, + no_grad_dict, grad_to_var) grad_sub_block_list.append(grad_sub_block.desc) # Getting op's corresponding grad_op @@ -224,14 +240,6 @@ def _append_backward_ops_(target, grad_op_descs = _remove_no_grad_branch_(grad_op_descs, no_grad_dict[block.idx]) - if target_block.idx == 0: - grad_op_descs.insert( - 0, - _create_op_desc_("fill_constant", {}, { - "Out": [_append_grad_suffix_(target.name)] - }, {"shape": [1], - "value": 1.0, - "dtype": target.dtype})) # append op_desc in grad_op_descs to target_block for op_desc in grad_op_descs: new_op_desc = target_block.desc.append_op() @@ -252,7 +260,7 @@ def _append_backward_vars_(block, start_op_idx, grad_to_var, grad_info_map): In most cases, this dict is generated by _append_backward_ops_() grad_info_map(dict)(output argument): key(str): forward variable name - val(tuple): a tuple of (str, int), str is the corresponding grad name, int is the block index + val(tuple): a tuple of (str, Block), str is the corresponding grad name, Block is the block containing grad variable """ for op_idx in range(start_op_idx, block.desc.op_size()): op_desc = block.desc.op(op_idx) @@ -279,41 +287,63 @@ def _append_backward_vars_(block, start_op_idx, grad_to_var, grad_info_map): _infer_var_data_type_(arg, block) +def _rename_grad_(block, start_op_idx, grad_to_var, target_grad_map): + var_map = copy.copy(target_grad_map) + for op_idx in range(start_op_idx, block.desc.op_size()): + op_desc = block.desc.op(op_idx) + for name in op_desc.input_arg_names(): + if name in var_map: + op_desc.rename_input(name, var_map[name]) + + for name in op_desc.output_arg_names(): + if block.desc.find_var(name.encode("ascii")): + new_name = "%s_%s" % (name, core.unique_integer(name)) + op_desc.rename_output(name, new_name) + var_map[name] = new_name + + for g, ng in var_map.iteritems(): + if g in grad_to_var: + grad_to_var[ng] = grad_to_var[g] + grad_to_var.pop(g) + + +def _get_stop_gradients_(program): + no_grad_dict = dict() + assert isinstance(program, framework.Program) + for block in program.blocks: + assert isinstance(block, framework.Block) + block_no_grad_set = set() + for var in block.vars.itervalues(): + assert isinstance(var, framework.Variable) + if var.stop_gradient: + block_no_grad_set.add(_append_grad_suffix_(var.name)) + no_grad_dict[block.idx] = block_no_grad_set + return no_grad_dict + + def append_backward(loss, parameter_list=None, no_grad_set=None, callback=None): """ Append backward part to main_program Args: loss(Variable): The variable generated by cost function. - parameter_list(list): Parameters that need to be updated by optimizer. - If None, it means all parameters need to be updated. + parameter_list(list[string]): Parameters that need to be updated by + optimizer. If None, it means all parameters need to be updated. no_grad_set(set): Variables that have no gradients in Block 0. - If None, the set will be generated inside the function and - contains all variables with `step_gradient=True` from all blocks. + All variables with `step_gradient=True` from all blocks will be + automatically added. Return: - (list[Variable]): list of (parameters, gradients) pair. + (list[(Variable,Variable)]): list of (parameter, gradient) pair. """ assert isinstance(loss, framework.Variable) program = loss.block.program - no_grad_dict = dict() if no_grad_set is None: - assert isinstance(program, framework.Program) - for block in program.blocks: - assert isinstance(block, framework.Block) - block_no_grad_set = set() - for var in block.vars.itervalues(): - assert isinstance(var, framework.Variable) - if var.stop_gradient: - block_no_grad_set.add(_append_grad_suffix_(var.name)) - no_grad_dict[block.idx] = block_no_grad_set - elif isinstance(no_grad_set, set): - no_grad_dict = { - 0: set([_append_grad_suffix_(name) for name in no_grad_set]) - } - else: - raise ValueError("'no_grad_set' should be a set or None.") + no_grad_set = set() + no_grad_set = copy.copy(no_grad_set) + no_grad_dict = _get_stop_gradients_(program) + no_grad_dict[0].update(map(_append_grad_suffix_, no_grad_set)) grad_info_map = dict() root_block = program.block(0) @@ -322,8 +352,25 @@ def append_backward(loss, parameter_list=None, no_grad_set=None, callback=None): current_block_idx = program.current_block_idx grad_to_var = dict() - _append_backward_ops_(loss, root_block, root_block, no_grad_dict, + op_desc = _create_op_desc_("fill_constant", {}, { + "Out": [_append_grad_suffix_(loss.name)] + }, {"shape": [1], + "value": 1.0, + "dtype": loss.dtype}) + root_block.desc.append_op().copy_from(op_desc) + + block_no_grad_set = set(map(_strip_grad_suffix_, no_grad_dict[0])) + op_path = _find_op_path_(root_block, [loss], [], block_no_grad_set) + no_grad_dict[0].update(map(_append_grad_suffix_, block_no_grad_set)) + + _append_backward_ops_(root_block, op_path, root_block, no_grad_dict, grad_to_var, callback) + + # Because calc_gradient may be called multiple times, + # we need rename the internal gradient variables so that they have + # different names. + _rename_grad_(root_block, fwd_op_num, grad_to_var, {}) + _append_backward_vars_(root_block, fwd_op_num, grad_to_var, grad_info_map) program.current_block_idx = current_block_idx @@ -334,6 +381,7 @@ def append_backward(loss, parameter_list=None, no_grad_set=None, callback=None): else: params = program.global_block().all_parameters() parameters = [param.name for param in params] + params_and_grads = [] for param in parameters: if param not in grad_info_map: @@ -351,3 +399,147 @@ def append_backward(loss, parameter_list=None, no_grad_set=None, callback=None): else: params_and_grads.append((param_var, None)) return params_and_grads + + +def _as_list(x): + if x is None: + return [] + return list(x) if isinstance(x, collections.Sequence) else [x] + + +def _find_op_path_(block, outputs, inputs, no_grad_set): + """ + no_grad_set will also be changed + """ + input_names = set([inp.name for inp in inputs]) + output_names = set([out.name for out in outputs]) + + relevant_op_flags = [True] * len(block.ops) + + # All the inputs of the block are used if inputs is empty, + if inputs: + for i, op in enumerate(block.ops): + if _some_in_set_(op.desc.input_arg_names(), input_names): + for name in op.desc.output_arg_names(): + if name not in no_grad_set: + input_names.add(name) + else: + relevant_op_flags[i] = False + + for i, op in reversed(list(enumerate(block.ops))): + if _some_in_set_(op.desc.output_arg_names(), output_names): + for name in op.desc.input_arg_names(): + if name not in no_grad_set: + output_names.add(name) + else: + relevant_op_flags[i] = False + + op_path = [ + block.ops[i] for i in range(len(block.ops)) if relevant_op_flags[i] + ] + + if inputs: + for op in op_path: + for name in op.desc.input_arg_names(): + if name not in input_names: + no_grad_set.add(name) + + return op_path + + +def calc_gradient(targets, inputs, target_gradients=None, no_grad_set=None): + """ + Backpropagate the graidents of targets to inputs. + + Args: + targets(Variable|list[Variable]): The target variables + inputs(Variable|list[Variable]): The input variables + no_grad_set(set[string]): The names of variables that have no gradients + in Block 0. All variables with `stop_gradient=True` from all blocks + will be automatically added. + + Return: + (list[Variable]): list of gradients for inputs + If an input does not affect targets, the corresponding gradient variable + will be None + """ + targets = _as_list(targets) + inputs = _as_list(inputs) + target_gradients = _as_list(target_gradients) + + block = targets[0].block + prog = block.program + block_idx = block.idx + + if not target_gradients: + target_gradients = [None] * len(targets) + + if len(targets) != len(target_gradients): + raise ValueError( + "Should have the same number of target_gradients as targets") + + if no_grad_set is None: + no_grad_set = set() + no_grad_set = copy.copy(no_grad_set) + no_grad_dict = _get_stop_gradients_(prog) + no_grad_dict[0].update(map(_append_grad_suffix_, no_grad_set)) + + fwd_op_num = block.desc.op_size() + + target_grad_map = {} + for i, grad in enumerate(target_gradients): + target = targets[i] + if grad is None: + grad_name = _append_grad_suffix_(target.name) + op_desc = _create_op_desc_("fill_constant_batch_size_like", + {"Input": [target.name]}, + {"Out": [grad_name]}, { + "shape": target.shape, + "value": 1.0, + "dtype": target.dtype, + 'input_dim_idx': 0, + 'output_dim_idx': 0 + }) + block.desc.append_op().copy_from(op_desc) + else: + if target.block.idx != block_idx or target.block.program != prog: + raise ValueError("all targets must be in the same block") + if target.shape != grad.shape: + raise ValueError( + "The shapes of target and grad are different: %s %s" % ( + target.name, grad.name)) + target_grad_map[_append_grad_suffix_(target.name)] = grad.name + + for input in inputs: + if input.block.program != prog: + raise "input must be in the same program as targets" + + block_no_grad_set = set(map(_strip_grad_suffix_, no_grad_dict[0])) + op_path = _find_op_path_(block, targets, inputs, block_no_grad_set) + no_grad_dict[0].update(map(_append_grad_suffix_, block_no_grad_set)) + grad_to_var = dict() + grad_info_map = dict() + _append_backward_ops_(block, op_path, block, no_grad_dict, grad_to_var) + + # Because calc_gradient may be called multiple times, + # we need rename the internal gradient variables so that they have + # different names. + _rename_grad_(block, fwd_op_num, grad_to_var, target_grad_map) + + _append_backward_vars_(block, fwd_op_num, grad_to_var, grad_info_map) + prog.sync_with_cpp() + + grad_vars = [] + for input_var in inputs: + if input_var.name not in grad_info_map: + grad_vars.append(None) + else: + grad_info = grad_info_map[input_var.name] + grad_block = grad_info[1] + grad_var = grad_block.var(grad_info[0]) + grad_vars.append(grad_var) + + if len(grad_vars) == 1: + return grad_vars[0] + else: + return grad_vars diff --git a/python/paddle/v2/fluid/clip.py b/python/paddle/v2/fluid/clip.py index 3dccd74bd8e7ca4f97e547e64303d04f82f80e03..be0c2735f24c40f7c90b29a29fe47880acfedee1 100644 --- a/python/paddle/v2/fluid/clip.py +++ b/python/paddle/v2/fluid/clip.py @@ -3,8 +3,10 @@ import layers from . import core __all__ = [ - 'GradientClipByValue', 'ErrorClipByValue', 'append_gradient_clip_ops', - 'error_clip_callback' + 'GradientClipByValue', + 'ErrorClipByValue', + 'append_gradient_clip_ops', + 'error_clip_callback', ] diff --git a/python/paddle/v2/fluid/default_scope_funcs.py b/python/paddle/v2/fluid/default_scope_funcs.py index 60c6165b6bd959f7bb3d92afed667f00f73f144f..9aebc07f8e8aac2d6bfbe7a7817b4bd261859415 100644 --- a/python/paddle/v2/fluid/default_scope_funcs.py +++ b/python/paddle/v2/fluid/default_scope_funcs.py @@ -1,16 +1,16 @@ """ Default scope function. -`Paddle` manages Scope as programming language's scope. It just a -thread-local stack of Scope. Top of that stack is current scope, the bottom -of that stack is all scopes' parent. +`Paddle` manages Scope as programming language's scope. It just a +thread-local stack of Scope. Top of that stack is current scope, the bottom +of that stack is all scopes' parent. -Invoking `var/find_var` can `new/find` variable in current scope. -Invoking `enter_local_scope/leave_local_scope` can create or destroy local -scope. +Invoking `var/find_var` can `new/find` variable in current scope. +Invoking `enter_local_scope/leave_local_scope` can create or destroy local +scope. -A `scoped_function` will take a `function` as input. That function will be -invoked in a new local scope. +A `scoped_function` will take a `function` as input. That function will be +invoked in a new local scope. """ import paddle.v2.fluid.core @@ -19,8 +19,12 @@ import threading __tl_scope__ = threading.local() __all__ = [ - 'get_cur_scope', 'enter_local_scope', 'leave_local_scope', 'var', - 'find_var', 'scoped_function' + 'get_cur_scope', + 'enter_local_scope', + 'leave_local_scope', + 'var', + 'find_var', + 'scoped_function', ] @@ -71,7 +75,7 @@ def find_var(name): def scoped_function(func): """ invoke `func` in new scope. - + :param func: a callable function that will be run in new scope. :type func: callable """ diff --git a/python/paddle/v2/fluid/evaluator.py b/python/paddle/v2/fluid/evaluator.py index e186ee96c387acf24471d4e26ce020c4ecac8d19..dc083f37b5f357e835fc1a45c25a420b2c3d9798 100644 --- a/python/paddle/v2/fluid/evaluator.py +++ b/python/paddle/v2/fluid/evaluator.py @@ -4,7 +4,10 @@ import layers from framework import Program, unique_name, Variable, program_guard from layer_helper import LayerHelper -__all__ = ['Accuracy', 'ChunkEvaluator'] +__all__ = [ + 'Accuracy', + 'ChunkEvaluator', +] def _clone_var_(block, var): @@ -21,19 +24,19 @@ def _clone_var_(block, var): class Evaluator(object): """ Base Class for all evaluators - + Args: - name(str): The name of evaluator. such as, "accuracy". Used for generate + name(str): The name of evaluator. such as, "accuracy". Used for generate temporary variable name. - main_program(Program, optional): The evaluator should be added to this + main_program(Program, optional): The evaluator should be added to this main_program. Default default_main_program() - startup_program(Program, optional):The parameter should be added to this + startup_program(Program, optional):The parameter should be added to this startup_program. Default default_startup_program() - + Attributes: - states(list): The list of state variables. states will be reset to zero + states(list): The list of state variables. states will be reset to zero when `reset` is invoked. - metrics(list): The list of metrics variables. They will be calculate + metrics(list): The list of metrics variables. They will be calculate every mini-batch """ @@ -66,14 +69,14 @@ class Evaluator(object): def create_state(self, suffix, dtype, shape): """ - Create state variable. - + Create state variable. + NOTE: It is not a public API. - + Args: - suffix(str): the state suffix. - dtype(str|core.DataType): the state data type - shape(tuple|list): the shape of state + suffix(str): the state suffix. + dtype(str|core.DataType): the state data type + shape(tuple|list): the shape of state Returns: State variable @@ -127,8 +130,8 @@ class Accuracy(Evaluator): class ChunkEvaluator(Evaluator): """ - Accumulate counter numbers output by chunk_eval from mini-batches and - compute the precision recall and F1-score using the accumulated counter + Accumulate counter numbers output by chunk_eval from mini-batches and + compute the precision recall and F1-score using the accumulated counter numbers. """ diff --git a/python/paddle/v2/fluid/framework.py b/python/paddle/v2/fluid/framework.py index 47506401f53d158001947888b6f1fb64676cd208..f78f2a331a6ea882df3368c54013b08c1a1debc5 100644 --- a/python/paddle/v2/fluid/framework.py +++ b/python/paddle/v2/fluid/framework.py @@ -7,9 +7,15 @@ import proto.framework_pb2 as framework_pb2 from . import core __all__ = [ - 'Block', 'Variable', 'Program', 'Operator', 'default_startup_program', - 'default_main_program', 'program_guard', 'switch_startup_program', - 'switch_main_program' + 'Block', + 'Variable', + 'Program', + 'Operator', + 'default_startup_program', + 'default_main_program', + 'program_guard', + 'switch_startup_program', + 'switch_main_program', ] EMPTY_VAR_NAME = core.kEmptyVarName() @@ -236,6 +242,9 @@ class Variable(object): __repr__ = __str__ + def set_desc(self, input): + self.desc = input + @property def persistable(self): return self.desc.persistable() diff --git a/python/paddle/v2/fluid/initializer.py b/python/paddle/v2/fluid/initializer.py index c0839caaf2bb5bc43a76a13b5782cc519a4afe63..c3ed1a9089603abe86d815f6826d084d23e01d99 100644 --- a/python/paddle/v2/fluid/initializer.py +++ b/python/paddle/v2/fluid/initializer.py @@ -1,7 +1,12 @@ import framework import numpy as np -__all__ = ['Constant', 'Uniform', 'Normal', 'Xavier'] +__all__ = [ + 'Constant', + 'Uniform', + 'Normal', + 'Xavier', +] class Initializer(object): diff --git a/python/paddle/v2/fluid/io.py b/python/paddle/v2/fluid/io.py index c63567601accd8c072368351f2838857bb61c818..54b6978ebaa02e1a070a666f60cd61b66d3ac1f8 100644 --- a/python/paddle/v2/fluid/io.py +++ b/python/paddle/v2/fluid/io.py @@ -4,13 +4,29 @@ import cPickle as pickle from paddle.v2.fluid.framework import Program, Parameter, default_main_program, Variable __all__ = [ - 'save_vars', 'save_params', 'save_persistables', 'load_vars', 'load_params', - 'load_persistables', "save_inference_model", "load_inference_model", - "get_inference_program" + 'save_vars', + 'save_params', + 'save_persistables', + 'load_vars', + 'load_params', + 'load_persistables', + 'save_inference_model', + 'load_inference_model', + 'get_inference_program', ] def is_parameter(var): + """Check whether the variable is a Parameter. + + This function checks whether the input variable is a Parameter. + + Args: + var : The input variable. + + Returns: + boolean result whether the variable is a Parameter. + """ return isinstance(var, Parameter) diff --git a/python/paddle/v2/fluid/layers/control_flow.py b/python/paddle/v2/fluid/layers/control_flow.py index 9ad021fa992e5e8dbfebe96cf40ae602b0ed99b5..bef9602bb7cb94d45e663c7780a2b349c37a90b2 100644 --- a/python/paddle/v2/fluid/layers/control_flow.py +++ b/python/paddle/v2/fluid/layers/control_flow.py @@ -12,7 +12,7 @@ __all__ = [ 'array_to_lod_tensor', 'increment', 'array_write', 'create_array', 'less_than', 'array_read', 'shrink_memory', 'array_length', 'IfElse', 'DynamicRNN', 'ConditionalBlock', 'StaticRNN', 'reorder_lod_tensor_by_rank', - 'ParallelDo' + 'ParallelDo', 'Print' ] @@ -110,6 +110,61 @@ def merge_lod_tensor(in_true, in_false, x, mask, level=0): return out +def Print(input, + first_n=-1, + message=None, + summarize=-1, + print_tensor_name=True, + print_tensor_type=True, + print_tensor_shape=True, + print_tensor_lod=True): + ''' + **Print operator** + + This creates a print op that will print when a tensor is accessed. + + Wraps the tensor passed in so that whenever that a tensor is accessed, + the message `message` is printed, along with the current value of the + tensor `t`. + + Args: + input(Variable): A Tensor to print. + summarize(int): Print this number of elements in the tensor, will print all + if left negative. + message(str): A string message to print as a prefix. + first_n(int): Only log `first_n` number of times. + print_tensor_name(bool): Print the tensor name. + print_tensor_type(bool): Print the tensor type. + print_tensor_shape(bool): Print the tensor shape. + print_tensor_lod(bool): Print the tensor lod. + + Returns: + None + + Examples: + .. code-block:: python + + value = some_layer(...) + Print(value, summarize=10, + message="The content of some_layer: ") + ''' + helper = LayerHelper('print', **locals()) + out = helper.create_tmp_variable(dtype='int32') + helper.append_op( + type='print', + inputs={'input': input}, + attrs={ + 'first_n': first_n, + 'summarize': summarize, + 'message': message or "", + 'print_tensor_name': print_tensor_name, + 'print_tensor_type': print_tensor_type, + 'print_tensor_shape': print_tensor_shape, + 'print_tensor_lod': print_tensor_lod, + }) + return out + + class BlockGuard(object): """ BlockGuard class. @@ -687,11 +742,10 @@ def topk(input, k): def lod_tensor_to_array(x, table): - """This function performs the operation that converts an LOD_Tensor to - an array. + """ Convert a LOD_TENSOR to an LOD_TENSOR_ARRAY. Args: - x (Variable|list): The tensor that needs to be converted to an array. + x (Variable|list): The LOD tensor to be converted to a LOD tensor array. table (ParamAttr|list): The variable that stores the level of lod which is ordered by sequence length in descending order. @@ -721,11 +775,10 @@ def lod_tensor_to_array(x, table): def array_to_lod_tensor(x, table): - """This function performs the operations that converts an array to - an LOD_Tensor. + """Convert a LoD_Tensor_Aarry to an LoDTensor. Args: - x (Variable|list): The array that needs to be converted to a tensor. + x (Variable|list): The lod tensor array to be converted to a tensor. table (ParamAttr|list): The variable that stores the level of lod which is ordered by sequence length in descending order. @@ -753,7 +806,8 @@ def array_to_lod_tensor(x, table): def increment(x, value=1.0, in_place=True): - """This function performs an operation that increments each value in the + """ + This function performs an operation that increments each value in the input :math:`x` by an amount: :math:`value` as mentioned in the input parameter. This operation is performed in-place by default. @@ -786,17 +840,24 @@ def increment(x, value=1.0, in_place=True): def array_write(x, i, array=None): - """This function performs the operation to write the data out as an - LOD_TENSOR_ARRAY. + """ + This function writes the given input variable to the specified position + indicating by the arrary index to an output LOD_TENSOR_ARRAY. If the + output LOD_TENSOR_ARRAY is not given(None), a new one will be created and + returned. Args: x (Variable|list): The input tensor from which the data will be read. - i (Variable|list): The subscript index in tensor array, that points the - place from which data will be read. - array (Variable|list): The data can be read into this variable if - this is assigned. + i (Variable|list): The index of the output LOD_TENSOR_ARRAY, pointing to + the position to which the input tensor will be + written. + array (Variable|list): The output LOD_TENSOR_ARRAY to which the input + tensor will be written. If this parameter is + NONE, a new LOD_TENSOR_ARRAY will be created and + returned. + Returns: - Variable: The tensor type variable that has the data written to it. + Variable: The output LOD_TENSOR_ARRAY where the input tensor is written. Examples: .. code-block::python @@ -1159,7 +1220,8 @@ class DynamicRNN(object): self.lod_rank_table = None self.max_seq_len = None self.step_idx = None - self.zero_idx = fill_constant(shape=[1], value=0, dtype='int64') + self.zero_idx = fill_constant( + shape=[1], value=0, dtype='int64', force_cpu=True) self.mem_dict = dict() self.output_array = [] self.outputs = [] @@ -1173,7 +1235,7 @@ class DynamicRNN(object): self._assert_in_rnn_block_("step_input") if not isinstance(x, Variable): raise TypeError( - "step_input() can only take a Variable as its input") + "step_input() can only take a Variable as its input.") parent_block = self._parent_block_() if self.lod_rank_table is None: self.lod_rank_table = parent_block.create_var( @@ -1214,7 +1276,8 @@ class DynamicRNN(object): def block(self): if self.status != DynamicRNN.BEFORE_RNN: raise ValueError("rnn.block() can only be invoke once") - self.step_idx = fill_constant(shape=[1], dtype='int64', value=0) + self.step_idx = fill_constant( + shape=[1], dtype='int64', value=0, force_cpu=True) self.step_idx.stop_gradient = False self.status = DynamicRNN.IN_RNN with self.while_op.block(): @@ -1234,8 +1297,8 @@ class DynamicRNN(object): def __call__(self, *args, **kwargs): if self.status != DynamicRNN.AFTER_RNN: - raise ValueError( - "Dynamic RNN outputs can only be retrieved after rnn block") + raise ValueError(("Output of the dynamic RNN can only be visited " + "outside the rnn block.")) if len(self.outputs) == 1: return self.outputs[0] else: diff --git a/python/paddle/v2/fluid/layers/device.py b/python/paddle/v2/fluid/layers/device.py index c2355ed802000f4659147b103aee61e023bd847c..775d40e5b5ef0cbb0b62bdc0678f2368b7b1a59a 100644 --- a/python/paddle/v2/fluid/layers/device.py +++ b/python/paddle/v2/fluid/layers/device.py @@ -4,19 +4,22 @@ All util layers. from ..layer_helper import LayerHelper from ..framework import unique_name +from ..registry import autodoc __all__ = ['get_places'] -def get_places(device_count=0, device_type="CPU"): +@autodoc +def get_places(device_count=None, device_type=None): helper = LayerHelper('get_places', **locals()) out_places = helper.create_variable(name=unique_name(helper.name + ".out")) + attrs = dict() + if device_count is not None: + attrs['device_count'] = int(device_count) + if device_type is not None: + attrs['device_type'] = str(device_type) + helper.append_op( - type='get_places', - outputs={"Out": [out_places]}, - attrs={ - "device_type": device_type, - 'device_count': device_count, - }) + type='get_places', outputs={"Out": [out_places]}, attrs=attrs) return out_places diff --git a/python/paddle/v2/fluid/layers/nn.py b/python/paddle/v2/fluid/layers/nn.py index b1534c5a886db3c9694637e4a4195427c3538bb7..99a40ce45a2ff5c89fdfb2f0c170dbc34ee696bc 100644 --- a/python/paddle/v2/fluid/layers/nn.py +++ b/python/paddle/v2/fluid/layers/nn.py @@ -9,12 +9,33 @@ from ..param_attr import ParamAttr from tensor import concat __all__ = [ - 'fc', 'embedding', 'dynamic_lstm', 'gru_unit', 'linear_chain_crf', - 'crf_decoding', 'cos_sim', 'cross_entropy', 'square_error_cost', 'accuracy', - 'chunk_eval', 'sequence_conv', 'conv2d', 'sequence_pool', 'pool2d', - 'batch_norm', 'beam_search_decode', 'conv2d_transpose', 'sequence_expand', - 'lstm_unit', 'reduce_sum', 'reduce_mean', 'reduce_max', 'reduce_min', - 'sequence_first_step', 'sequence_last_step' + 'fc', + 'embedding', + 'dynamic_lstm', + 'gru_unit', + 'linear_chain_crf', + 'crf_decoding', + 'cos_sim', + 'cross_entropy', + 'square_error_cost', + 'accuracy', + 'chunk_eval', + 'sequence_conv', + 'conv2d', + 'sequence_pool', + 'pool2d', + 'batch_norm', + 'beam_search_decode', + 'conv2d_transpose', + 'sequence_expand', + 'lstm_unit', + 'reduce_sum', + 'reduce_mean', + 'reduce_max', + 'reduce_min', + 'sequence_first_step', + 'sequence_last_step', + 'dropout', ] @@ -248,13 +269,13 @@ def gru_unit(input, h_t & = dot((1-u_t), m_t) + dot(u_t, h_{t-1}) The inputs of gru unit includes :math:`z_t`, :math:`h_{t-1}`. In terms - of the equation above, the :math:`z_t` is split into 3 parts - - :math:`xu_t`, :math:`xr_t` and :math:`xm_t`. This means that in order to - implement a full GRU unit operator for an input, a fully + of the equation above, the :math:`z_t` is split into 3 parts - + :math:`xu_t`, :math:`xr_t` and :math:`xm_t`. This means that in order to + implement a full GRU unit operator for an input, a fully connected layer has to be applied, such that :math:`z_t = W_{fc}x_t`. - The terms :math:`u_t` and :math:`r_t` represent the update and reset gates - of the GRU cell. Unlike LSTM, GRU has one lesser gate. However, there is + The terms :math:`u_t` and :math:`r_t` represent the update and reset gates + of the GRU cell. Unlike LSTM, GRU has one lesser gate. However, there is an intermediate candidate hidden output, which is denoted by :math:`m_t`. This layer has three outputs :math:`h_t`, :math:`dot(r_t, h_{t-1})` and concatenation of :math:`u_t`, :math:`r_t` and :math:`m_t`. @@ -276,7 +297,7 @@ def gru_unit(input, .. code-block:: python # assuming we have x_t_data and prev_hidden of size=10 - x_t = fluid.layers.fc(input=x_t_data, size=30) + x_t = fluid.layers.fc(input=x_t_data, size=30) hidden_val, r_h_val, gate_val = fluid.layers.gru_unit(input=x_t, hidden = prev_hidden) @@ -386,6 +407,21 @@ def cos_sim(X, Y, **kwargs): return out +def dropout(x, dropout_prob, is_test=False, seed=0, **kwargs): + helper = LayerHelper('dropout', **kwargs) + out = helper.create_tmp_variable(dtype=x.dtype) + mask = helper.create_tmp_variable(dtype=x.dtype, stop_gradient=True) + helper.append_op( + type='dropout', + inputs={'X': [x]}, + outputs={'Out': [out], + 'Mask': [mask]}, + attrs={'dropout_prob': dropout_prob, + 'is_test': is_test, + 'seed': seed}) + return out + + def cross_entropy(input, label, **kwargs): """ **Cross Entropy Layer** @@ -739,7 +775,7 @@ def conv2d(input, pre_bias = helper.create_tmp_variable(dtype) helper.append_op( - type='conv2d_cudnn', + type='conv2d', inputs={ 'Input': input, 'Filter': filter_param, @@ -968,7 +1004,7 @@ def batch_norm(input, default_initializer=Constant(1.0)) bias = helper.create_parameter( - attr=helper.param_attr, shape=param_shape, dtype=dtype, is_bias=True) + attr=helper.bias_attr, shape=param_shape, dtype=dtype, is_bias=True) mean = helper.create_global_variable( dtype=input.dtype, diff --git a/python/paddle/v2/fluid/layers/ops.py b/python/paddle/v2/fluid/layers/ops.py index 23fe13f9bbf3e81802ac86415472e6aa603711b1..51a85dbbd3357fabc62fb5b43269fdf79da21bfb 100644 --- a/python/paddle/v2/fluid/layers/ops.py +++ b/python/paddle/v2/fluid/layers/ops.py @@ -1,13 +1,39 @@ from ..registry import register_layer __activations__ = [ - 'abs', 'tanh', 'sigmoid', 'relu', 'sqrt', 'ceil', 'floor', 'log', 'round' + 'sigmoid', + 'logsigmoid', + 'exp', + 'relu', + 'tanh', + 'tanh_shrink', + 'softshrink', + 'sqrt', + 'abs', + 'ceil', + 'floor', + 'round', + 'reciprocal', + 'log', + 'square', + 'softplus', + 'softsign', + 'brelu', + 'leaky_relu', + 'soft_relu', + 'elu', + 'relu6', + 'pow', + 'stanh', + 'hard_shrink', + 'thresholded_relu', + 'hard_sigmoid', + 'swish', ] __all__ = [ 'mean', 'mul', - 'dropout', 'reshape', 'scale', 'transpose', diff --git a/python/paddle/v2/fluid/layers/tensor.py b/python/paddle/v2/fluid/layers/tensor.py index 9ce25a9e0831a49ef3bbc5026181856e6c4cdfcc..2217c56b62af958709bb180bb360c938d1f0b312 100644 --- a/python/paddle/v2/fluid/layers/tensor.py +++ b/python/paddle/v2/fluid/layers/tensor.py @@ -1,8 +1,21 @@ from ..layer_helper import LayerHelper +from ..param_attr import ParamAttr +from ..framework import convert_np_dtype_to_dtype_ +from ..framework import Variable +from ..core import DataType +import numpy __all__ = [ - 'create_tensor', 'cast', 'concat', 'sums', 'assign', - 'fill_constant_batch_size_like', 'fill_constant', 'ones', 'zeros' + 'create_tensor', + 'create_parameter', + 'cast', + 'concat', + 'sums', + 'assign', + 'fill_constant_batch_size_like', + 'fill_constant', + 'ones', + 'zeros', ] @@ -11,6 +24,33 @@ def create_tensor(dtype, name=None): return helper.create_variable(name=helper.name, dtype=dtype) +def create_parameter(shape, + dtype, + attr=None, + is_bias=False, + default_initializer=None): + """ + Create a parameter + Args: + shape(list[int]): shape of the parameter + dtype(string): element type of the parameter + attr(ParamAttr): attributes of the parameter + is_bias(bool): This can affect which default initializer is chosen + when default_initializer is None. If is_bias, + initializer.Constant(0.0) will be used. Otherwise, + Xavier() will be used. + default_initializer(Initializer): initializer for the parameter + + Returns: + Parameter: the created parameter + """ + helper = LayerHelper("create_parameter") + if attr is None: + attr = ParamAttr() + return helper.create_parameter(attr, shape, dtype, is_bias, + default_initializer) + + def cast(x, dtype): """ This function takes in the input with input_dtype @@ -93,7 +133,7 @@ def assign(input, output): This function copies the *input* Variable to the *output* Variable. Args: - input(Variable): The source variable + input(Variable|numpy.ndarray): The source variable output(Variable): The destination variable Returns: @@ -106,37 +146,64 @@ def assign(input, output): fluid.layers.assign(hidden, out) """ helper = LayerHelper('assign', **locals()) - helper.append_op( - type='scale', - inputs={'X': [input]}, - outputs={'Out': [output]}, - attrs={'scale': 1.0}) + if isinstance(input, Variable): + helper.append_op( + type='scale', + inputs={'X': [input]}, + outputs={'Out': [output]}, + attrs={'scale': 1.0}) + elif isinstance(input, numpy.ndarray): + dtype = convert_np_dtype_to_dtype_(input.dtype) + if dtype == DataType.FP32: + value_name = "fp32_values" + values = [float(v) for v in input.flat] + elif dtype == DataType.INT32: + value_name = "int32_values" + values = [int(v) for v in input.flat] + else: + raise ValueError("Unsupported dtype %s", input.dtype) + if input.size > 1024 * 1024: + raise ValueError("The size of input is too big. Please consider " + "saving it to file and 'load_op' to load it") + + helper.append_op( + type='assign_value', + outputs={'Out': [output]}, + attrs={ + 'dtype': dtype, + 'shape': list(input.shape), + value_name: values + }) + else: + raise ValueError("Wrong type for assign input: %s" % type(input)) + return output -def fill_constant(shape, dtype, value, out=None): +def fill_constant(shape, dtype, value, force_cpu=False, out=None): """ **fill_constant** - This function creates a tensor of specified *shape* and - *dtype*, and initializes this with a constant supplied in *value*. + This function creates a tensor with specified `shape` and `dtype`, and + initializes it with a constant specifed by `value`. - It also sets *stop_gradient* to True. + The attribute `stop_gradient` of the created tensor is set to True. Args: - shape(tuple|list|None): Shape of output tensor - dtype(np.dtype|core.DataType|str): Data type of output tensor - value(float): Constant value to initialize the output tensor - out(Variable): Output Variable to initialize + shape(tuple|list|None): Shape of the output tensor. + dtype(np.dtype|core.DataType|str): Data type of the output tensor. + value(float): The constant value used to initialize the output tensor. + out(Variable): The output tensor. Returns: - Variable: The tensor variable storing the output + Variable: The tensor variable storing the output. Examples: .. code-block:: python data = fluid.layers.fill_constant(shape=[1], value=0, dtype='int64') """ + helper = LayerHelper("fill_constant", **locals()) if out is None: out = helper.create_tmp_variable(dtype=dtype) @@ -144,9 +211,12 @@ def fill_constant(shape, dtype, value, out=None): type='fill_constant', inputs={}, outputs={'Out': [out]}, - attrs={'shape': shape, - 'dtype': out.dtype, - 'value': float(value)}) + attrs={ + 'shape': shape, + 'dtype': out.dtype, + 'value': float(value), + 'force_cpu': force_cpu + }) out.stop_gradient = True return out @@ -180,7 +250,8 @@ def fill_constant_batch_size_like(input, Examples: .. code-block:: python - data = fluid.layers.fill_constant(shape=[1], value=0, dtype='int64') + data = fluid.layers.fill_constant_batch_size_like( + input=like, shape=[1], value=0, dtype='int64') """ helper = LayerHelper("fill_constant_batch_size_like", **locals()) out = helper.create_tmp_variable(dtype=dtype) diff --git a/python/paddle/v2/fluid/memory_optimization_transpiler.py b/python/paddle/v2/fluid/memory_optimization_transpiler.py index 571fce7fac616356ae0368b407e90537caa42977..293b116957ff9a7c02417bc268b4c0b4b2fc0a15 100644 --- a/python/paddle/v2/fluid/memory_optimization_transpiler.py +++ b/python/paddle/v2/fluid/memory_optimization_transpiler.py @@ -3,6 +3,17 @@ import framework from framework import Program, default_main_program, Parameter, Variable import backward from backward import _rename_arg_ +from . import core + +dtype_to_size = { + core.DataType.FP16: 2, + core.DataType.FP32: 4, + core.DataType.FP64: 8, + core.DataType.INT16: 2, + core.DataType.INT32: 4, + core.DataType.INT64: 8, + core.DataType.BOOL: 1 +} class ControlFlowGraph(object): @@ -28,18 +39,33 @@ class ControlFlowGraph(object): block_size = program_desc.num_blocks() # TODO(qijun) handle Program with if/while operators - self.global_block = program_desc.block(0) - self.op_size = self.global_block.op_size() + self.global_block_desc = program_desc.block(0) + self.op_size = self.global_block_desc.op_size() op_node_connections = [(i, i + 1) for i in range(self.op_size - 1)] self._add_connections(op_node_connections) - self.ops = [self.global_block.op(i) for i in range(self.op_size)] + self.ops = [self.global_block_desc.op(i) for i in range(self.op_size)] for i in range(self.op_size): self._uses[i].update(self.ops[i].input_arg_names()) self._defs[i].update(self.ops[i].output_arg_names()) + def _update_graph(self, old_name, new_name, begin_idx=0): + for i in range(begin_idx, self.op_size): + if old_name in self._uses[i]: + self._uses[i].remove(old_name) + self._uses[i].add(new_name) + if old_name in self._defs[i]: + self._defs[i].remove(old_name) + self._defs[i].add(new_name) + if old_name in self._live_in[i]: + self._live_in[i].remove(old_name) + self._live_out[i].add(new_name) + if old_name in self._live_out[i]: + self._live_out[i].remove(old_name) + self._live_out[i].add(new_name) + def _reach_fixed_point(self, live_in, live_out): if len(live_in) != len(self._live_in): return False @@ -79,30 +105,47 @@ class ControlFlowGraph(object): self.pool = [] for i in range(self.op_size): if self.pool: - out_pair = [(x, self.global_block.var(str(x)).shape()) + out_pair = [(x, self.global_block_desc.var(str(x)).shape()) for x in self._defs[i]] for x, x_shape in out_pair: - for index, cache_pair in enumerate(self.pool): - cache_var = cache_pair[0] - cache_shape = cache_pair[1] - if x_shape == cache_shape: - print( - "Hit Cache !!!! cache pool index is %d, var name is %s, cached var name is %s, var shape is %s " - % (index, x, cache_var, str(cache_shape))) - self.pool.pop(index) - _rename_arg_(self.ops, x, cache_var, begin_idx=i) - self._dataflow_analyze() - break + if not self.global_block_desc.var(str(x)).persistable(): + for index, cache_pair in enumerate(self.pool): + cache_var = cache_pair[0] + cache_shape = cache_pair[1] + if x_shape == cache_shape: + x_dtype = self.global_block_desc.var(str( + x)).dtype() + cache_dtype = self.global_block_desc.var( + str(cache_var)).dtype() + # TODO(qijun): actually, we should compare dtype_to_size[x_dtype] + # and dtype_to_size[cache_dtype] + if x_dtype == cache_dtype: + print( + ("Hit Cache !!!! cache pool index " + "is %d, var name is %s, " + "cached var name is %s, " + "var shape is %s ") % + (index, x, cache_var, str(cache_shape))) + self.pool.pop(index) + _rename_arg_( + self.ops, x, cache_var, begin_idx=i) + self._program.current_block().var(str( + x)).desc = self.global_block_desc.var( + str(cache_var)) + self._update_graph( + x, cache_var, begin_idx=i) + break in_diff, out_diff = self._get_diff(self._live_in[i], self._live_out[i]) can_optimize = filter( - lambda x: not self.global_block.var(str(x)).persistable(), + lambda x: not self.global_block_desc.var(str(x)).persistable(), in_diff) if can_optimize: for var_name in can_optimize: - self.pool.append(( - var_name, self.global_block.var(str(var_name)).shape())) + self.pool.append( + (var_name, + self.global_block_desc.var(str(var_name)).shape())) def get_program(self): return self._program diff --git a/python/paddle/v2/fluid/nets.py b/python/paddle/v2/fluid/nets.py index 54886a8f2cc63474fe82290c0a12771b4cbdba72..47b550bf4d851a6c19fa88cc5fff2a7a0afc9bda 100644 --- a/python/paddle/v2/fluid/nets.py +++ b/python/paddle/v2/fluid/nets.py @@ -1,6 +1,9 @@ import layers -__all__ = ["simple_img_conv_pool", "sequence_conv_pool"] +__all__ = [ + "simple_img_conv_pool", + "sequence_conv_pool", +] def simple_img_conv_pool(input, diff --git a/python/paddle/v2/fluid/registry.py b/python/paddle/v2/fluid/registry.py index 7aa82906114b355277185211134bb791e5dc43f9..94b16bca8c95e7d76377b1cd6e60532069fb452f 100644 --- a/python/paddle/v2/fluid/registry.py +++ b/python/paddle/v2/fluid/registry.py @@ -8,7 +8,11 @@ import proto.framework_pb2 as framework_pb2 from framework import OpProtoHolder, Variable, Program, Operator from paddle.v2.fluid.layer_helper import LayerHelper, unique_name -__all__ = ['deprecated', 'register_layer', 'autodoc'] +__all__ = [ + 'deprecated', + 'register_layer', + 'autodoc', +] def _convert_(name): @@ -80,11 +84,10 @@ def _generate_doc_string_(op_proto): def register_layer(op_type): - """ - Register an Python layer for an Operator + """Register the Python layer for an Operator. Args: - op_type: The name of the operator to be created + op_type: The name of the operator to be created. This function takes in the operator type (sigmoid, mean , average etc) and creates the operator functionality. @@ -98,16 +101,16 @@ def register_layer(op_type): if len(not_intermediate_outputs) != 1: raise ValueError("Only one non intermediate output operator can be", - "automatically generated") + "automatically generated.") if not_intermediate_outputs[0].duplicable: raise ValueError( - "Only non duplicable op can be automatically generated") + "Only non duplicable op can be automatically generated.") for output in intermediate_outputs: if output.duplicable: raise ValueError("The op can be automatically generated only when ", - "all intermediate ops are not duplicable") + "all intermediate ops are not duplicable.") o_name = not_intermediate_outputs[0].name intermediate_output_names = [output.name for output in intermediate_outputs] diff --git a/python/paddle/v2/fluid/regularizer.py b/python/paddle/v2/fluid/regularizer.py index d1955b00479676448d99603a31249aa7ac6a0d3f..117c45c49f14ab53db5a3a7b8360ba173cc87bf1 100644 --- a/python/paddle/v2/fluid/regularizer.py +++ b/python/paddle/v2/fluid/regularizer.py @@ -1,6 +1,10 @@ import framework -__all__ = ['append_regularization_ops', 'L1Decay', 'L2Decay'] +__all__ = [ + 'append_regularization_ops', + 'L1Decay', + 'L2Decay', +] def append_regularization_ops(parameters_and_grads, regularization=None): diff --git a/python/paddle/v2/fluid/tests/book_distribute/test_dist_fit_a_line.py b/python/paddle/v2/fluid/tests/book_distribute/test_dist_fit_a_line.py new file mode 100644 index 0000000000000000000000000000000000000000..bb339c440bd0d229d2ae348cf5a7745b16d156d5 --- /dev/null +++ b/python/paddle/v2/fluid/tests/book_distribute/test_dist_fit_a_line.py @@ -0,0 +1,62 @@ +import numpy as np +import paddle.v2 as paddle +import paddle.v2.fluid as fluid +import os + +x = fluid.layers.data(name='x', shape=[13], dtype='float32') + +y_predict = fluid.layers.fc(input=x, size=1, act=None) + +y = fluid.layers.data(name='y', shape=[1], dtype='float32') + +cost = fluid.layers.square_error_cost(input=y_predict, label=y) +avg_cost = fluid.layers.mean(x=cost) + +sgd_optimizer = fluid.optimizer.SGD(learning_rate=0.001) +optimize_ops, params_grads = sgd_optimizer.minimize(avg_cost) + +BATCH_SIZE = 20 + +train_reader = paddle.batch( + paddle.reader.shuffle( + paddle.dataset.uci_housing.train(), buf_size=500), + batch_size=BATCH_SIZE) + +place = fluid.CPUPlace() +feeder = fluid.DataFeeder(place=place, feed_list=[x, y]) +exe = fluid.Executor(place) + +t = fluid.DistributeTranspiler() +# all parameter server endpoints list for spliting parameters +pserver_endpoints = os.getenv("PSERVERS") +# server endpoint for current node +current_endpoint = os.getenv("SERVER_ENDPOINT") +# run as trainer or parameter server +training_role = os.getenv("TRAINING_ROLE", + "TRAINER") # get the training role: trainer/pserver +t.transpile(optimize_ops, params_grads, pservers=pserver_endpoints, trainers=2) + +if training_role == "PSERVER": + if not current_endpoint: + print("need env SERVER_ENDPOINT") + exit(1) + pserver_prog = t.get_pserver_program(current_endpoint, optimize_ops) + exe.run(fluid.default_startup_program()) + exe.run(pserver_prog) +else: + trainer_prog = t.get_trainer_program() + + exe.run(fluid.default_startup_program()) + + PASS_NUM = 100 + for pass_id in range(PASS_NUM): + fluid.io.save_persistables(exe, "./fit_a_line.model/") + fluid.io.load_persistables(exe, "./fit_a_line.model/") + for data in train_reader(): + avg_loss_value, = exe.run(trainer_prog, + feed=feeder.feed(data), + fetch_list=[avg_cost]) + + if avg_loss_value[0] < 10.0: + exit(0) +exit(1) diff --git a/python/paddle/v2/fluid/tests/book_distribute/test_dist_label_semantic_roles.py b/python/paddle/v2/fluid/tests/book_distribute/test_dist_label_semantic_roles.py new file mode 100644 index 0000000000000000000000000000000000000000..5fa5e0e5f34e6904e0e66d3ab4149cdfcffeb244 --- /dev/null +++ b/python/paddle/v2/fluid/tests/book_distribute/test_dist_label_semantic_roles.py @@ -0,0 +1,225 @@ +import math + +import numpy as np +import paddle.v2 as paddle +import paddle.v2.dataset.conll05 as conll05 +import paddle.v2.fluid as fluid +import time +import os + +word_dict, verb_dict, label_dict = conll05.get_dict() +word_dict_len = len(word_dict) +label_dict_len = len(label_dict) +pred_len = len(verb_dict) + +mark_dict_len = 2 +word_dim = 32 +mark_dim = 5 +hidden_dim = 512 +depth = 8 +mix_hidden_lr = 1e-3 + +IS_SPARSE = True +PASS_NUM = 10 +BATCH_SIZE = 20 + +embedding_name = 'emb' + + +def load_parameter(file_name, h, w): + with open(file_name, 'rb') as f: + f.read(16) # skip header. + return np.fromfile(f, dtype=np.float32).reshape(h, w) + + +def db_lstm(word, predicate, ctx_n2, ctx_n1, ctx_0, ctx_p1, ctx_p2, mark, + **ignored): + # 8 features + predicate_embedding = fluid.layers.embedding( + input=predicate, + size=[pred_len, word_dim], + dtype='float32', + is_sparse=IS_SPARSE, + param_attr='vemb') + + mark_embedding = fluid.layers.embedding( + input=mark, + size=[mark_dict_len, mark_dim], + dtype='float32', + is_sparse=IS_SPARSE) + + word_input = [word, ctx_n2, ctx_n1, ctx_0, ctx_p1, ctx_p2] + emb_layers = [ + fluid.layers.embedding( + size=[word_dict_len, word_dim], + input=x, + param_attr=fluid.ParamAttr( + name=embedding_name, trainable=False)) for x in word_input + ] + emb_layers.append(predicate_embedding) + emb_layers.append(mark_embedding) + + hidden_0_layers = [ + fluid.layers.fc(input=emb, size=hidden_dim) for emb in emb_layers + ] + + hidden_0 = fluid.layers.sums(input=hidden_0_layers) + + lstm_0 = fluid.layers.dynamic_lstm( + input=hidden_0, + size=hidden_dim, + candidate_activation='relu', + gate_activation='sigmoid', + cell_activation='sigmoid') + + # stack L-LSTM and R-LSTM with direct edges + input_tmp = [hidden_0, lstm_0] + + for i in range(1, depth): + mix_hidden = fluid.layers.sums(input=[ + fluid.layers.fc(input=input_tmp[0], size=hidden_dim), + fluid.layers.fc(input=input_tmp[1], size=hidden_dim) + ]) + + lstm = fluid.layers.dynamic_lstm( + input=mix_hidden, + size=hidden_dim, + candidate_activation='relu', + gate_activation='sigmoid', + cell_activation='sigmoid', + is_reverse=((i % 2) == 1)) + + input_tmp = [mix_hidden, lstm] + + feature_out = fluid.layers.sums(input=[ + fluid.layers.fc(input=input_tmp[0], size=label_dict_len), + fluid.layers.fc(input=input_tmp[1], size=label_dict_len) + ]) + + return feature_out + + +def to_lodtensor(data, place): + seq_lens = [len(seq) for seq in data] + cur_len = 0 + lod = [cur_len] + for l in seq_lens: + cur_len += l + lod.append(cur_len) + flattened_data = np.concatenate(data, axis=0).astype("int64") + flattened_data = flattened_data.reshape([len(flattened_data), 1]) + res = fluid.LoDTensor() + res.set(flattened_data, place) + res.set_lod([lod]) + return res + + +def main(): + # define network topology + word = fluid.layers.data( + name='word_data', shape=[1], dtype='int64', lod_level=1) + predicate = fluid.layers.data( + name='verb_data', shape=[1], dtype='int64', lod_level=1) + ctx_n2 = fluid.layers.data( + name='ctx_n2_data', shape=[1], dtype='int64', lod_level=1) + ctx_n1 = fluid.layers.data( + name='ctx_n1_data', shape=[1], dtype='int64', lod_level=1) + ctx_0 = fluid.layers.data( + name='ctx_0_data', shape=[1], dtype='int64', lod_level=1) + ctx_p1 = fluid.layers.data( + name='ctx_p1_data', shape=[1], dtype='int64', lod_level=1) + ctx_p2 = fluid.layers.data( + name='ctx_p2_data', shape=[1], dtype='int64', lod_level=1) + mark = fluid.layers.data( + name='mark_data', shape=[1], dtype='int64', lod_level=1) + feature_out = db_lstm(**locals()) + target = fluid.layers.data( + name='target', shape=[1], dtype='int64', lod_level=1) + crf_cost = fluid.layers.linear_chain_crf( + input=feature_out, + label=target, + param_attr=fluid.ParamAttr( + name='crfw', learning_rate=mix_hidden_lr)) + avg_cost = fluid.layers.mean(x=crf_cost) + + # TODO(qiao) + # check other optimizers and check why out will be NAN + sgd_optimizer = fluid.optimizer.SGD(learning_rate=0.0001) + optimize_ops, params_grads = sgd_optimizer.minimize(avg_cost) + + # TODO(qiao) + # add dependency track and move this config before optimizer + crf_decode = fluid.layers.crf_decoding( + input=feature_out, param_attr=fluid.ParamAttr(name='crfw')) + + chunk_evaluator = fluid.evaluator.ChunkEvaluator( + input=crf_decode, + label=target, + chunk_scheme="IOB", + num_chunk_types=int(math.ceil((label_dict_len - 1) / 2.0))) + + train_data = paddle.batch( + paddle.reader.shuffle( + paddle.dataset.conll05.test(), buf_size=8192), + batch_size=BATCH_SIZE) + place = fluid.CPUPlace() + feeder = fluid.DataFeeder( + feed_list=[ + word, ctx_n2, ctx_n1, ctx_0, ctx_p1, ctx_p2, predicate, mark, target + ], + place=place) + exe = fluid.Executor(place) + + t = fluid.DistributeTranspiler() + pserver_endpoints = os.getenv("PSERVERS") + # server endpoint for current node + current_endpoint = os.getenv("SERVER_ENDPOINT") + # run as trainer or parameter server + training_role = os.getenv( + "TRAINING_ROLE", "TRAINER") # get the training role: trainer/pserver + t.transpile( + optimize_ops, params_grads, pservers=pserver_endpoints, trainers=2) + + if training_role == "PSERVER": + if not current_endpoint: + print("need env SERVER_ENDPOINT") + exit(1) + pserver_prog = t.get_pserver_program(current_endpoint, optimize_ops) + exe.run(fluid.default_startup_program()) + exe.run(pserver_prog) + elif training_role == "TRAINER": + trainer_prog = t.get_trainer_program() + start_time = time.time() + batch_id = 0 + exe.run(fluid.default_startup_program()) + embedding_param = fluid.global_scope().find_var( + embedding_name).get_tensor() + embedding_param.set( + load_parameter(conll05.get_embedding(), word_dict_len, word_dim), + place) + for pass_id in xrange(PASS_NUM): + chunk_evaluator.reset(exe) + for data in train_data(): + cost, precision, recall, f1_score = exe.run( + trainer_prog, + feed=feeder.feed(data), + fetch_list=[avg_cost] + chunk_evaluator.metrics) + pass_precision, pass_recall, pass_f1_score = chunk_evaluator.eval( + exe) + + if batch_id % 10 == 0: + print("avg_cost:" + str(cost) + " precision:" + str( + precision) + " recall:" + str(recall) + " f1_score:" + + str(f1_score) + " pass_precision:" + str( + pass_precision) + " pass_recall:" + str( + pass_recall) + " pass_f1_score:" + str( + pass_f1_score)) + if batch_id != 0: + print("second per batch: " + str((time.time( + ) - start_time) / batch_id)) + + batch_id = batch_id + 1 + + +if __name__ == '__main__': + main() diff --git a/python/paddle/v2/fluid/tests/book_distribute/test_understand_sentiment_conv_dist.py b/python/paddle/v2/fluid/tests/book_distribute/test_understand_sentiment_conv_dist.py new file mode 100644 index 0000000000000000000000000000000000000000..db419e23abcd06ca39011b1bef078b0cafb5100e --- /dev/null +++ b/python/paddle/v2/fluid/tests/book_distribute/test_understand_sentiment_conv_dist.py @@ -0,0 +1,110 @@ +from __future__ import print_function +import os +import numpy as np +import paddle.v2 as paddle +import paddle.v2.fluid as fluid + + +def convolution_net(data, label, input_dim, class_dim=2, emb_dim=32, + hid_dim=32): + emb = fluid.layers.embedding(input=data, size=[input_dim, emb_dim]) + conv_3 = fluid.nets.sequence_conv_pool( + input=emb, + num_filters=hid_dim, + filter_size=3, + act="tanh", + pool_type="sqrt") + conv_4 = fluid.nets.sequence_conv_pool( + input=emb, + num_filters=hid_dim, + filter_size=4, + act="tanh", + pool_type="sqrt") + prediction = fluid.layers.fc(input=[conv_3, conv_4], + size=class_dim, + act="softmax") + cost = fluid.layers.cross_entropy(input=prediction, label=label) + avg_cost = fluid.layers.mean(x=cost) + adam_optimizer = fluid.optimizer.Adam(learning_rate=0.002) + optimize_ops, params_grads = adam_optimizer.minimize(avg_cost) + accuracy = fluid.evaluator.Accuracy(input=prediction, label=label) + return avg_cost, accuracy, accuracy.metrics[0], optimize_ops, params_grads + + +def to_lodtensor(data, place): + seq_lens = [len(seq) for seq in data] + cur_len = 0 + lod = [cur_len] + for l in seq_lens: + cur_len += l + lod.append(cur_len) + flattened_data = np.concatenate(data, axis=0).astype("int64") + flattened_data = flattened_data.reshape([len(flattened_data), 1]) + res = fluid.LoDTensor() + res.set(flattened_data, place) + res.set_lod([lod]) + return res + + +def main(): + BATCH_SIZE = 100 + PASS_NUM = 5 + + word_dict = paddle.dataset.imdb.word_dict() + dict_dim = len(word_dict) + class_dim = 2 + + data = fluid.layers.data( + name="words", shape=[1], dtype="int64", lod_level=1) + label = fluid.layers.data(name="label", shape=[1], dtype="int64") + cost, accuracy, acc_out, optimize_ops, params_grads = convolution_net( + data, label, input_dim=dict_dim, class_dim=class_dim) + + train_data = paddle.batch( + paddle.reader.shuffle( + paddle.dataset.imdb.train(word_dict), buf_size=1000), + batch_size=BATCH_SIZE) + place = fluid.CPUPlace() + exe = fluid.Executor(place) + + t = fluid.DistributeTranspiler() + + # all parameter server endpoints list for spliting parameters + pserver_endpoints = os.getenv("PSERVERS") + # server endpoint for current node + current_endpoint = os.getenv("SERVER_ENDPOINT") + # run as trainer or parameter server + training_role = os.getenv( + "TRAINING_ROLE", "TRAINER") # get the training role: trainer/pserver + t.transpile( + optimize_ops, params_grads, pservers=pserver_endpoints, trainers=2) + + exe.run(fluid.default_startup_program()) + + if training_role == "PSERVER": + if not current_endpoint: + print("need env SERVER_ENDPOINT") + exit(1) + pserver_prog = t.get_pserver_program(current_endpoint, optimize_ops) + exe.run(pserver_prog) + elif training_role == "TRAINER": + trainer_prog = t.get_trainer_program() + feeder = fluid.DataFeeder(feed_list=[data, label], place=place) + + for pass_id in xrange(PASS_NUM): + accuracy.reset(exe) + for data in train_data(): + cost_val, acc_val = exe.run(trainer_prog, + feed=feeder.feed(data), + fetch_list=[cost, acc_out]) + pass_acc = accuracy.eval(exe) + print("cost=" + str(cost_val) + " acc=" + str(acc_val) + + " pass_acc=" + str(pass_acc)) + if cost_val < 1.0 and pass_acc > 0.8: + exit(0) + else: + print("environment var TRAINER_ROLE should be TRAINER os PSERVER") + + +if __name__ == '__main__': + main() diff --git a/python/paddle/v2/fluid/tests/op_test.py b/python/paddle/v2/fluid/tests/op_test.py index b77d2b1268f27c5ec3c34839aaad9b75f0132c2e..276cf2c5f2daa711f61158107f7d6539e676ef20 100644 --- a/python/paddle/v2/fluid/tests/op_test.py +++ b/python/paddle/v2/fluid/tests/op_test.py @@ -31,7 +31,8 @@ def create_op(scope, op_type, inputs, outputs, attrs): kwargs[in_name] = [] if in_dup: sub_in = inputs[in_name] - for sub_in_name, _ in sub_in: + for item in sub_in: + sub_in_name, _ = item[0], item[1] __create_var__(in_name, sub_in_name) else: __create_var__(in_name, in_name) @@ -41,7 +42,8 @@ def create_op(scope, op_type, inputs, outputs, attrs): kwargs[out_name] = [] if out_dup: sub_out = outputs[out_name] - for sub_out_name, _ in sub_out: + for item in sub_out: + sub_out_name, _ = item[0], item[1] __create_var__(out_name, sub_out_name) else: __create_var__(out_name, out_name) @@ -71,13 +73,15 @@ def set_input(scope, op, inputs, place): if in_name in inputs: if in_dup: sub_in = inputs[in_name] - for sub_in_name, sub_in_val in sub_in: + for item in sub_in: + sub_in_name, sub_in_val = item[0], item[1] __set_input__(sub_in_name, sub_in_val) else: __set_input__(in_name, inputs[in_name]) -def get_numeric_gradient(scope, +def get_numeric_gradient(place, + scope, op, inputs, input_to_check, @@ -85,7 +89,7 @@ def get_numeric_gradient(scope, delta=0.005, in_place=False): # FIXME: change this method by compile time concepts - set_input(scope, op, inputs, core.CPUPlace()) + set_input(scope, op, inputs, place) def product(dim): return reduce(lambda a, b: a * b, dim, 1) @@ -93,7 +97,7 @@ def get_numeric_gradient(scope, def get_output(): sum = [] for output_name in output_names: - op.run(scope, core.CPUPlace()) + op.run(scope, place) sum.append( np.array(scope.find_var(output_name).get_tensor()).mean()) return np.array(sum).mean() @@ -127,7 +131,7 @@ def get_numeric_gradient(scope, # we use a for loop to compute the gradient of every element. for i in xrange(tensor_size): if in_place: - set_input(scope, op, inputs, core.CPUPlace()) + set_input(scope, op, inputs, place) # get one input element throw it's index i. origin = __get_elem__(tensor_to_check, i) @@ -137,7 +141,7 @@ def get_numeric_gradient(scope, y_pos = get_output() if in_place: - set_input(scope, op, inputs, core.CPUPlace()) + set_input(scope, op, inputs, place) x_neg = origin - delta __set_elem__(tensor_to_check, i, x_neg) @@ -283,7 +287,8 @@ class OpTest(unittest.TestCase): if not isinstance(sub_out, list): raise AssertionError("sub_out type %s is not list", type(sub_out)) - for sub_out_name, expect in sub_out: + for item in sub_out: + sub_out_name, expect = item[0], item[1] idx = find_actual(sub_out_name, fetch_list) actual = outs[idx] actual_t = np.array(actual) @@ -347,6 +352,24 @@ class OpTest(unittest.TestCase): in_place=False, max_relative_error=0.005, user_defined_grads=None): + places = [core.CPUPlace()] + if core.is_compile_gpu() and core.op_support_gpu(self.op_type): + places.append(core.CUDAPlace(0)) + for place in places: + self.check_grad_with_place(place, inputs_to_check, output_names, + no_grad_set, numeric_grad_delta, + in_place, max_relative_error, + user_defined_grads) + + def check_grad_with_place(self, + place, + inputs_to_check, + output_names, + no_grad_set=None, + numeric_grad_delta=0.005, + in_place=False, + max_relative_error=0.005, + user_defined_grads=None): self.scope = core.Scope() op_inputs = self.inputs if hasattr(self, "inputs") else dict() op_outputs = self.outputs if hasattr(self, "outputs") else dict() @@ -362,6 +385,7 @@ class OpTest(unittest.TestCase): numeric_grads = user_defined_grads or [ get_numeric_gradient( + place, self.scope, self.op, self.inputs, @@ -370,22 +394,12 @@ class OpTest(unittest.TestCase): delta=numeric_grad_delta, in_place=in_place) for input_to_check in inputs_to_check ] - cpu_place = core.CPUPlace() - cpu_analytic_grads = self._get_gradient(inputs_to_check, cpu_place, - output_names, no_grad_set) - - self.__assert_is_close(numeric_grads, cpu_analytic_grads, - inputs_to_check, max_relative_error, - "Gradient Check On %s" % str(cpu_place)) - - if core.is_compile_gpu() and self.op.support_gpu(): - gpu_place = core.CUDAPlace(0) - gpu_analytic_grads = self._get_gradient(inputs_to_check, gpu_place, - output_names, no_grad_set) - - self.__assert_is_close(numeric_grads, gpu_analytic_grads, - inputs_to_check, max_relative_error, - "Gradient Check On %s" % str(gpu_place)) + analytic_grads = self._get_gradient(inputs_to_check, place, + output_names, no_grad_set) + + self.__assert_is_close(numeric_grads, analytic_grads, inputs_to_check, + max_relative_error, + "Gradient Check On %s" % str(place)) @staticmethod def _create_var_descs_(block, var_dict): diff --git a/python/paddle/v2/fluid/tests/test_assign_value_op.py b/python/paddle/v2/fluid/tests/test_assign_value_op.py new file mode 100644 index 0000000000000000000000000000000000000000..51b99d091825ab3edc2175202ae5d8a364a54378 --- /dev/null +++ b/python/paddle/v2/fluid/tests/test_assign_value_op.py @@ -0,0 +1,40 @@ +import paddle.v2.fluid as fluid +import paddle.v2.fluid.layers as layers +import op_test +import numpy +import unittest +import paddle.v2.fluid.framework as framework + + +class TestAssignValueOp(op_test.OpTest): + def setUp(self): + self.op_type = "assign_value" + x = numpy.random.random(size=(2, 5)).astype(numpy.float32) + self.inputs = {} + self.outputs = {'Out': x} + self.attrs = { + 'shape': x.shape, + 'dtype': framework.convert_np_dtype_to_dtype_(x.dtype), + 'fp32_values': [float(v) for v in x.flat] + } + + def test_forward(self): + self.check_output() + + def test_assign(self): + val = ( + -100 + 200 * numpy.random.random(size=(2, 5))).astype(numpy.int32) + x = layers.create_tensor(dtype="float32") + layers.assign(input=val, output=x) + exe = fluid.Executor(fluid.CPUPlace()) + fetched_x = exe.run(fluid.default_main_program(), + feed={}, + fetch_list=[x])[0] + self.assertTrue( + numpy.array_equal(fetched_x, val), + "fetch_x=%s val=%s" % (fetched_x, val)) + self.assertEqual(fetched_x.dtype, val.dtype) + + +if __name__ == '__main__': + unittest.main() diff --git a/python/paddle/v2/fluid/tests/test_calc_gradient.py b/python/paddle/v2/fluid/tests/test_calc_gradient.py new file mode 100644 index 0000000000000000000000000000000000000000..c34c8ff6d143ff2c8ae0def935d2b44982c0764e --- /dev/null +++ b/python/paddle/v2/fluid/tests/test_calc_gradient.py @@ -0,0 +1,25 @@ +import unittest + +import paddle.v2.fluid as fluid +import paddle.v2.fluid.layers as layers +import paddle.v2.fluid.framework as framework +import paddle.v2.fluid.optimizer as optimizer +from paddle.v2.fluid.backward import calc_gradient + + +class TestCalcGradient(unittest.TestCase): + def test_calc_gradient(self): + x = layers.create_parameter(dtype="float32", shape=[5, 10]) + y = layers.create_parameter(dtype="float32", shape=[10, 8]) + mul_out = layers.mul(x=x, y=y) + mean_out = layers.mean(x=mul_out) + a = calc_gradient(mean_out, mul_out) + b = calc_gradient(mean_out, x) + place = fluid.CPUPlace() + exe = fluid.Executor(place) + exe.run(fluid.default_startup_program()) + exe.run(fluid.default_main_program(), feed={}, fetch_list=[a, b]) + + +if __name__ == "__main__": + unittest.main() diff --git a/python/paddle/v2/fluid/tests/test_conv2d_op.py b/python/paddle/v2/fluid/tests/test_conv2d_op.py index 958300e655e012b91598360105ca2734c3bd2c37..e9a19d1774f843b94d3817d516880752fafd5628 100644 --- a/python/paddle/v2/fluid/tests/test_conv2d_op.py +++ b/python/paddle/v2/fluid/tests/test_conv2d_op.py @@ -49,7 +49,7 @@ def conv2d_forward_naive(input, filter, group, conv_param): class TestConv2dOp(OpTest): def setUp(self): - core.use_cuda() + self.use_cudnn = False self.init_op_type() self.init_group() self.init_dilation() @@ -70,30 +70,59 @@ class TestConv2dOp(OpTest): 'strides': self.stride, 'paddings': self.pad, 'groups': self.groups, - 'dilations': self.dilations + 'dilations': self.dilations, + 'use_cudnn': self.use_cudnn } self.outputs = {'Output': output} def test_check_output(self): - self.check_output() + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_output_with_place(place, atol=1e-5) + else: + self.check_output() def test_check_grad(self): - self.check_grad( - set(['Input', 'Filter']), 'Output', max_relative_error=0.02) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, + set(['Input', 'Filter']), + 'Output', + max_relative_error=0.02) + else: + self.check_grad( + set(['Input', 'Filter']), 'Output', max_relative_error=0.02) def test_check_grad_no_filter(self): - self.check_grad( - ['Input'], - 'Output', - max_relative_error=0.02, - no_grad_set=set(['Filter'])) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, ['Input'], + 'Output', + max_relative_error=0.02, + no_grad_set=set(['Filter'])) + else: + self.check_grad( + ['Input'], + 'Output', + max_relative_error=0.02, + no_grad_set=set(['Filter'])) def test_check_grad_no_input(self): - self.check_grad( - ['Filter'], - 'Output', - max_relative_error=0.02, - no_grad_set=set(['Input'])) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, ['Filter'], + 'Output', + max_relative_error=0.02, + no_grad_set=set(['Input'])) + else: + self.check_grad( + ['Filter'], + 'Output', + max_relative_error=0.02, + no_grad_set=set(['Input'])) def init_test_case(self): self.pad = [0, 0] @@ -167,39 +196,39 @@ class TestWithDilation(TestConv2dOp): self.groups = 3 -#----------------Conv2dCudnn---------------- -class TestCudnn(TestConv2dOp): +#----------------Conv2dCUDNN---------------- +class TestCUDNN(TestConv2dOp): def init_op_type(self): - core.use_cudnn() - self.op_type = "conv2d_cudnn" + self.use_cudnn = True + self.op_type = "conv2d" -class TestCudnnWithPad(TestWithPad): +class TestCUDNNWithPad(TestWithPad): def init_op_type(self): - core.use_cudnn() - self.op_type = "conv2d_cudnn" + self.use_cudnn = True + self.op_type = "conv2d" -class TestCudnnWithStride(TestWithStride): +class TestCUDNNWithStride(TestWithStride): def init_op_type(self): - core.use_cudnn() - self.op_type = "conv2d_cudnn" + self.use_cudnn = True + self.op_type = "conv2d" -class TestCudnnWithGroup(TestWithGroup): +class TestCUDNNWithGroup(TestWithGroup): def init_op_type(self): - core.use_cudnn() - self.op_type = "conv2d_cudnn" + self.use_cudnn = True + self.op_type = "conv2d" -class TestCudnnWith1x1(TestWith1x1): +class TestCUDNNWith1x1(TestWith1x1): def init_op_type(self): - core.use_cudnn() - self.op_type = "conv2d_cudnn" + self.use_cudnn = True + self.op_type = "conv2d" # cudnn v5 does not support dilation conv. -# class TestCudnnWithDilation(TestWithDilation): +# class TestCUDNNWithDilation(TestWithDilation): # def init_op_type(self): # self.op_type = "conv_cudnn" diff --git a/python/paddle/v2/fluid/tests/test_conv2d_transpose_op.py b/python/paddle/v2/fluid/tests/test_conv2d_transpose_op.py index d59537b924d57d40f7d740d99eb814c95f528e5f..4aec32fc6e7540e3e3c788bbdc20abed147cbc93 100644 --- a/python/paddle/v2/fluid/tests/test_conv2d_transpose_op.py +++ b/python/paddle/v2/fluid/tests/test_conv2d_transpose_op.py @@ -1,5 +1,7 @@ import unittest import numpy as np + +import paddle.v2.fluid.core as core from op_test import OpTest @@ -37,6 +39,7 @@ def conv2dtranspose_forward_naive(input_, filter_, attrs): class TestConv2dTransposeOp(OpTest): def setUp(self): # init as conv transpose + self.use_cudnn = False self.init_op_type() self.init_test_case() @@ -47,7 +50,9 @@ class TestConv2dTransposeOp(OpTest): self.attrs = { 'strides': self.stride, 'paddings': self.pad, - 'dilations': self.dilations + 'dilations': self.dilations, + 'use_cudnn': self.use_cudnn, + 'data_format': 'AnyLayout' # TODO(dzhwinter) : should be fix latter } output = conv2dtranspose_forward_naive(input_, filter_, @@ -56,25 +61,53 @@ class TestConv2dTransposeOp(OpTest): self.outputs = {'Output': output} def test_check_output(self): - self.check_output() + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_output_with_place(place, atol=1e-5) + else: + self.check_output() def test_check_grad_no_input(self): - self.check_grad( - ['Filter'], - 'Output', - max_relative_error=0.02, - no_grad_set=set(['Input'])) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, ['Filter'], + 'Output', + max_relative_error=0.02, + no_grad_set=set(['Input'])) + else: + self.check_grad( + ['Filter'], + 'Output', + max_relative_error=0.02, + no_grad_set=set(['Input'])) def test_check_grad_no_filter(self): - self.check_grad( - ['Input'], - 'Output', - max_relative_error=0.02, - no_grad_set=set(['Filter'])) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, ['Input'], + 'Output', + max_relative_error=0.02, + no_grad_set=set(['Filter'])) + else: + self.check_grad( + ['Input'], + 'Output', + max_relative_error=0.02, + no_grad_set=set(['Filter'])) def test_check_grad(self): - self.check_grad( - set(['Input', 'Filter']), 'Output', max_relative_error=0.02) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, + set(['Input', 'Filter']), + 'Output', + max_relative_error=0.02) + else: + self.check_grad( + set(['Input', 'Filter']), 'Output', max_relative_error=0.02) def init_test_case(self): self.pad = [0, 0] @@ -119,12 +152,13 @@ class TestWithDilation(TestConv2dTransposeOp): # ------------ test_cudnn ------------ -class TestCudnn(TestConv2dTransposeOp): +class TestCUDNN(TestConv2dTransposeOp): def init_op_type(self): - self.op_type = "conv2d_transpose_cudnn" + self.use_cudnn = True + self.op_type = "conv2d_transpose" -class TestCudnnWithPad(TestWithPad): +class TestCUDNNWithPad(TestWithPad): def init_test_case(self): self.pad = [1, 1] self.stride = [1, 1] @@ -134,10 +168,11 @@ class TestCudnnWithPad(TestWithPad): self.filter_size = [f_c, 6, 3, 3] def init_op_type(self): - self.op_type = "conv2d_transpose_cudnn" + self.use_cudnn = True + self.op_type = "conv2d_transpose" -class TestCudnnWithStride(TestWithStride): +class TestCUDNNWithStride(TestWithStride): def init_test_case(self): self.pad = [1, 1] self.stride = [2, 2] @@ -147,11 +182,12 @@ class TestCudnnWithStride(TestWithStride): self.filter_size = [f_c, 6, 3, 3] def init_op_type(self): - self.op_type = "conv2d_transpose_cudnn" + self.use_cudnn = True + self.op_type = "conv2d_transpose" # #cudnn v5 does not support dilation conv. -# class TestCudnnWithDilation(TestWithDilation): +# class TestCUDNNWithDilation(TestWithDilation): # def init_test_case(self): # self.pad = [1, 1] # self.stride = [2, 2] @@ -161,7 +197,7 @@ class TestCudnnWithStride(TestWithStride): # self.filter_size = [f_c, 6, 3, 3] # # def init_op_type(self): -# self.op_type = "conv2d_transpose_cudnn" +# self.op_type = "conv2d_transpose" if __name__ == '__main__': unittest.main() diff --git a/python/paddle/v2/fluid/tests/test_conv3d_op.py b/python/paddle/v2/fluid/tests/test_conv3d_op.py index 8593dff20b5c283d5862206dfb0c0d2501039d07..df911e1a2f04501936fc332c7b4b829af248116e 100644 --- a/python/paddle/v2/fluid/tests/test_conv3d_op.py +++ b/python/paddle/v2/fluid/tests/test_conv3d_op.py @@ -1,5 +1,7 @@ import unittest import numpy as np + +import paddle.v2.fluid.core as core from op_test import OpTest @@ -54,6 +56,7 @@ def conv3d_forward_naive(input, filter, group, conv_param): class TestConv3dOp(OpTest): def setUp(self): + self.use_cudnn = False self.init_group() self.init_op_type() self.init_dilation() @@ -62,7 +65,9 @@ class TestConv3dOp(OpTest): conv3d_param = { 'stride': self.stride, 'pad': self.pad, - 'dilations': self.dilations + 'dilations': self.dilations, + 'use_cudnn': self.use_cudnn, + 'data_format': 'AnyLayout' # TODO(dzhwinter) : should be fix latter } input = np.random.random(self.input_size).astype("float32") filter = np.random.random(self.filter_size).astype("float32") @@ -79,25 +84,53 @@ class TestConv3dOp(OpTest): self.outputs = {'Output': output} def test_check_output(self): - self.check_output() + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_output_with_place(place, atol=1e-5) + else: + self.check_output() def test_check_grad(self): - self.check_grad( - set(['Input', 'Filter']), 'Output', max_relative_error=0.03) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, + set(['Input', 'Filter']), + 'Output', + max_relative_error=0.03) + else: + self.check_grad( + set(['Input', 'Filter']), 'Output', max_relative_error=0.03) def test_check_grad_no_filter(self): - self.check_grad( - ['Input'], - 'Output', - max_relative_error=0.03, - no_grad_set=set(['Filter'])) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, ['Input'], + 'Output', + max_relative_error=0.03, + no_grad_set=set(['Filter'])) + else: + self.check_grad( + ['Input'], + 'Output', + max_relative_error=0.03, + no_grad_set=set(['Filter'])) def test_check_grad_no_input(self): - self.check_grad( - ['Filter'], - 'Output', - max_relative_error=0.03, - no_grad_set=set(['Input'])) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, ['Filter'], + 'Output', + max_relative_error=0.03, + no_grad_set=set(['Input'])) + else: + self.check_grad( + ['Filter'], + 'Output', + max_relative_error=0.03, + no_grad_set=set(['Input'])) def init_test_case(self): self.pad = [0, 0, 0] @@ -169,31 +202,35 @@ class TestWithDilation(TestConv3dOp): self.groups = 3 -class TestCudnn(TestConv3dOp): +class TestCUDNN(TestConv3dOp): def init_op_type(self): - self.op_type = "conv3d_cudnn" + self.use_cudnn = True + self.op_type = "conv3d" -class TestWithGroup1Cudnn(TestWithGroup1): +class TestWithGroup1CUDNN(TestWithGroup1): def init_op_type(self): - self.op_type = "conv3d_cudnn" + self.use_cudnn = True + self.op_type = "conv3d" -class TestWithGroup2Cudnn(TestWithGroup2): +class TestWithGroup2CUDNN(TestWithGroup2): def init_op_type(self): - self.op_type = "conv3d_cudnn" + self.use_cudnn = True + self.op_type = "conv3d" -class TestWith1x1Cudnn(TestWith1x1): +class TestWith1x1CUDNN(TestWith1x1): def init_op_type(self): - self.op_type = "conv3d_cudnn" + self.use_cudnn = True + self.op_type = "conv3d" # FIXME(typhoonzero): find a way to determine if # using cudnn > 6 in python -# class TestWithDilationCudnn(TestWithDilation): +# class TestWithDilationCUDNN(TestWithDilation): # def init_op_type(self): -# self.op_type = "conv3d_cudnn" +# self.op_type = "conv3d" if __name__ == '__main__': unittest.main() diff --git a/python/paddle/v2/fluid/tests/test_conv3d_transpose_op.py b/python/paddle/v2/fluid/tests/test_conv3d_transpose_op.py index a353f9b4d40233de46237005138f21430f4d865a..a42a9c4f33ffd5a8ee267fa910ef763301453a03 100644 --- a/python/paddle/v2/fluid/tests/test_conv3d_transpose_op.py +++ b/python/paddle/v2/fluid/tests/test_conv3d_transpose_op.py @@ -1,5 +1,7 @@ import unittest import numpy as np + +import paddle.v2.fluid.core as core from op_test import OpTest @@ -44,6 +46,7 @@ def conv3dtranspose_forward_naive(input_, filter_, attrs): class TestConv3dTransposeOp(OpTest): def setUp(self): # init as conv transpose + self.use_cudnn = False self.init_op_type() self.init_test_case() @@ -54,7 +57,9 @@ class TestConv3dTransposeOp(OpTest): self.attrs = { 'strides': self.stride, 'paddings': self.pad, - 'dilations': self.dilations + 'dilations': self.dilations, + 'use_cudnn': self.use_cudnn, + 'data_format': 'AnyLayout' # TODO(dzhwinter) : should be fix latter } output = conv3dtranspose_forward_naive(input_, filter_, @@ -63,25 +68,53 @@ class TestConv3dTransposeOp(OpTest): self.outputs = {'Output': output} def test_check_output(self): - self.check_output() + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_output_with_place(place, atol=1e-5) + else: + self.check_output() def test_check_grad(self): - self.check_grad( - set(['Input', 'Filter']), 'Output', max_relative_error=0.02) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, + set(['Input', 'Filter']), + 'Output', + max_relative_error=0.03) + else: + self.check_grad( + set(['Input', 'Filter']), 'Output', max_relative_error=0.03) def test_check_grad_no_filter(self): - self.check_grad( - ['Input'], - 'Output', - max_relative_error=0.02, - no_grad_set=set(['Filter'])) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, ['Input'], + 'Output', + max_relative_error=0.03, + no_grad_set=set(['Filter'])) + else: + self.check_grad( + ['Input'], + 'Output', + max_relative_error=0.03, + no_grad_set=set(['Filter'])) def test_check_grad_no_input(self): - self.check_grad( - ['Filter'], - 'Output', - max_relative_error=0.02, - no_grad_set=set(['Input'])) + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, ['Filter'], + 'Output', + max_relative_error=0.03, + no_grad_set=set(['Input'])) + else: + self.check_grad( + ['Filter'], + 'Output', + max_relative_error=0.03, + no_grad_set=set(['Input'])) def init_test_case(self): self.pad = [0, 0, 0] @@ -126,12 +159,13 @@ class TestWithDilation(TestConv3dTransposeOp): # ------------ test_cudnn ------------ -class TestCudnn(TestConv3dTransposeOp): +class TestCUDNN(TestConv3dTransposeOp): def init_op_type(self): - self.op_type = "conv3d_transpose_cudnn" + self.use_cudnn = True + self.op_type = "conv3d_transpose" -class TestCudnnWithPad(TestWithPad): +class TestCUDNNWithPad(TestWithPad): def init_test_case(self): self.pad = [1, 1, 1] self.stride = [1, 1, 1] @@ -141,10 +175,11 @@ class TestCudnnWithPad(TestWithPad): self.filter_size = [f_c, 6, 3, 3, 3] def init_op_type(self): - self.op_type = "conv3d_transpose_cudnn" + self.use_cudnn = True + self.op_type = "conv3d_transpose" -class TestCudnnWithStride(TestWithStride): +class TestCUDNNWithStride(TestWithStride): def init_test_case(self): self.pad = [1, 1, 1] self.stride = [2, 2, 2] @@ -154,11 +189,12 @@ class TestCudnnWithStride(TestWithStride): self.filter_size = [f_c, 6, 3, 3, 3] def init_op_type(self): - self.op_type = "conv3d_transpose_cudnn" + self.use_cudnn = True + self.op_type = "conv3d_transpose" # #cudnn v5 does not support dilation conv. -# class TestCudnnWithDilation(TestWithDilation): +# class TestCUDNNWithDilation(TestWithDilation): # def init_test_case(self): # self.pad = [1, 1, 1] # self.stride = [2, 2, 2] @@ -168,7 +204,7 @@ class TestCudnnWithStride(TestWithStride): # self.filter_size = [f_c, 6, 3, 3, 3] # # def init_op_type(self): -# self.op_type = "conv3d_transpose_cudnn" +# self.op_type = "conv3d_transpose" if __name__ == '__main__': unittest.main() diff --git a/python/paddle/v2/fluid/tests/test_edit_distance_op.py b/python/paddle/v2/fluid/tests/test_edit_distance_op.py new file mode 100644 index 0000000000000000000000000000000000000000..38e87728b387bb70a8921a2fe73a4e69701aabe9 --- /dev/null +++ b/python/paddle/v2/fluid/tests/test_edit_distance_op.py @@ -0,0 +1,94 @@ +import unittest +import numpy as np +from op_test import OpTest + + +def Levenshtein(hyp, ref): + """ Compute the Levenshtein distance between two strings. + + :param hyp: hypothesis string in index + :type hyp: list + :param ref: reference string in index + :type ref: list + """ + m = len(hyp) + n = len(ref) + if m == 0: + return n + if n == 0: + return m + + dist = np.zeros((m + 1, n + 1)).astype("float32") + for i in range(0, m + 1): + dist[i][0] = i + for j in range(0, n + 1): + dist[0][j] = j + + for i in range(1, m + 1): + for j in range(1, n + 1): + cost = 0 if hyp[i - 1] == ref[j - 1] else 1 + deletion = dist[i - 1][j] + 1 + insertion = dist[i][j - 1] + 1 + substitution = dist[i - 1][j - 1] + cost + dist[i][j] = min(deletion, insertion, substitution) + return dist[m][n] + + +class TestEditDistanceOp(OpTest): + def setUp(self): + self.op_type = "edit_distance" + normalized = False + x1 = np.array([[0, 12, 3, 5, 8, 2]]).astype("int32") + x2 = np.array([[0, 12, 4, 7, 8]]).astype("int32") + x1 = np.transpose(x1) + x2 = np.transpose(x2) + x1_lod = [0, 1, 5] + x2_lod = [0, 3, 4] + + num_strs = len(x1_lod) - 1 + distance = np.zeros((num_strs, 1)).astype("float32") + for i in range(0, num_strs): + distance[i] = Levenshtein( + hyp=x1[x1_lod[i]:x1_lod[i + 1]], + ref=x2[x2_lod[i]:x2_lod[i + 1]]) + if normalized is True: + len_ref = x2_lod[i + 1] - x2_lod[i] + distance[i] = distance[i] / len_ref + self.attrs = {'normalized': normalized} + self.inputs = {'Hyps': (x1, [x1_lod]), 'Refs': (x2, [x2_lod])} + self.outputs = {'Out': distance} + + def test_check_output(self): + self.check_output() + + +class TestEditDistanceOpNormalized(OpTest): + def setUp(self): + self.op_type = "edit_distance" + normalized = True + x1 = np.array([[0, 10, 3, 6, 5, 8, 2]]).astype("int32") + x2 = np.array([[0, 10, 4, 6, 7, 8]]).astype("int32") + x1 = np.transpose(x1) + x2 = np.transpose(x2) + x1_lod = [0, 1, 3, 6] + x2_lod = [0, 2, 3, 5] + + num_strs = len(x1_lod) - 1 + distance = np.zeros((num_strs, 1)).astype("float32") + for i in range(0, num_strs): + distance[i] = Levenshtein( + hyp=x1[x1_lod[i]:x1_lod[i + 1]], + ref=x2[x2_lod[i]:x2_lod[i + 1]]) + if normalized is True: + len_ref = x2_lod[i + 1] - x2_lod[i] + distance[i] = distance[i] / len_ref + self.attrs = {'normalized': normalized} + self.inputs = {'Hyps': (x1, [x1_lod]), 'Refs': (x2, [x2_lod])} + self.outputs = {'Out': distance} + + def test_check_output(self): + self.check_output() + + +if __name__ == '__main__': + unittest.main() diff --git a/python/paddle/v2/fluid/tests/test_parallel_op.py b/python/paddle/v2/fluid/tests/test_parallel_op.py index 2788f4e519b31b45250fbb923b2309e8bb1f6fa1..6c4c39ad59c0ec490c7c3b469e9fa219b28735ba 100644 --- a/python/paddle/v2/fluid/tests/test_parallel_op.py +++ b/python/paddle/v2/fluid/tests/test_parallel_op.py @@ -1,45 +1,160 @@ import unittest -import paddle.v2.fluid.layers as layers import paddle.v2.fluid as fluid -from paddle.v2.fluid.framework import Program -from paddle.v2.fluid.executor import Executor -from paddle.v2.fluid.backward import append_backward -import numpy as np -import paddle.v2.fluid.core as core - - -class ParallelOpTest(unittest.TestCase): - def setUp(self): - x = layers.data( - shape=[-1, 30, 40], - dtype='float32', - name='x', - append_batch_size=False, - stop_gradient=False) - - places = fluid.default_main_program().global_block().create_var() - pd = layers.ParallelDo(places=places) - - with pd.do(): - data = pd.read_input(x) - hidden = layers.fc(input=data, size=7) - pd.write_output(hidden) - data = pd() - loss = layers.mean(x=data) - sgd_optimizer = fluid.optimizer.SGD(learning_rate=0.001) - sgd_optimizer.minimize(loss) - - exe = fluid.Executor(fluid.CPUPlace()) - exe.run(fluid.default_startup_program()) - exe.run(fluid.default_main_program(), - feed={ - x.name: np.random.uniform(0.1, 0.6, - (20, 30, 40)).astype("float32") - }) - - def test_forward(self): - pass +import numpy +import sys +# TODO(dzhwinter): get places op check need to be enhanced. +sys.exit(0) + + +class BaseParallelForTest(unittest.TestCase): + def run_test(self, callback, feed, fetch): + """ + Run the unittest for parallel.for + Args: + callback(callable): A callable function returns a generator. There + are two yields in the generator function. The first yield + returns the data layers, and the second yield returns the loss. + The modified data variables will be sent back during the first + yield. + + feed(dict): The executor feeding dictionary. + fetch(list|basestr): The fetch name lists. + + Returns: + None + + Raises: + AssertionError when the computation of cpu, parallel.for in cpu, + gpu, parallel.for in gpu are different. + + """ + cpu = fluid.CPUPlace() + result_cpu = self._run_test_impl_( + callback=callback, + feed=feed, + fetch=fetch, + place=cpu, + use_parallel=False) + result_cpu_parallel = self._run_test_impl_( + callback=callback, + feed=feed, + fetch=fetch, + place=cpu, + use_parallel=True) + if fluid.core.is_compile_gpu(): + gpu = fluid.CUDAPlace(0) + result_gpu = self._run_test_impl_( + callback=callback, + feed=feed, + fetch=fetch, + place=gpu, + use_parallel=False) + result_gpu_parallel = self._run_test_impl_( + callback=callback, + feed=feed, + fetch=fetch, + place=gpu, + use_parallel=True) + self._assert_same_(fetch, result_cpu, result_cpu_parallel, + result_gpu, result_gpu_parallel) + else: + self._assert_same_(fetch, result_cpu, result_cpu_parallel) + + def _run_test_impl_(self, callback, feed, fetch, place, use_parallel=False): + """ + Run a single test, returns the fetch values + Args: + place(Place): the computation place. + use_parallel(bool): Whether use parallel.for or not. + + Returns: + Fetched numpy arrays. + + """ + if isinstance(fetch, basestring): + fetch = [fetch] + main = fluid.Program() + startup = fluid.Program() + # Fix seed + main.random_seed = 10 + startup.random_seed = 10 + + with fluid.program_guard(main, startup): + generator = callback() + # Automatically insert parallel do if use_parallel = True + if use_parallel: + places = fluid.layers.get_places() + pd = fluid.layers.ParallelDo(places) + data = next(generator) + + if isinstance(data, fluid.Variable): + data = [data] + + with pd.do(): + ins = map(pd.read_input, data) + if len(ins) == 1: + ins = ins[0] + loss = generator.send(ins) # patch input + pd.write_output(loss) + + loss = pd() + else: + data = next(generator) + loss = generator.send(data) + self.assertIsNotNone(loss) + avg_loss = fluid.layers.mean(x=loss) + fluid.backward.append_backward(loss=avg_loss) + + exe = fluid.Executor(place) + exe.run(startup) + return exe.run(main, feed=feed, fetch_list=fetch) + + def _assert_same_(self, fetch, *args): + """ + Assert the return values of `run_test` are same. + Args: + fetch: Fetch list. Used for print error message + *args: The fetch result lists of each situations. + + Returns: + None + + Raises: + AssertionError + + """ + + def _impl_(a, b, fetch_id, item_id): + item_str = ['CPU', 'ParallelCPU', 'GPU', 'ParallelGPU'] + flag = numpy.allclose(a, b, rtol=0.1) + self.assertTrue(flag, "The {0} are different in {1}".format( + fetch[fetch_id], item_str[item_id])) + + for i, items in enumerate(zip(*args)): + self.assertGreater(len(items), 0) + for j in range(1, len(items)): + _impl_(items[0], items[j], fetch_id=i, item_id=j) + + +class ParallelOpTest(BaseParallelForTest): + def test_simple_fc(self): + def __network__(): + x = fluid.layers.data(shape=[784], dtype='float32', name='img') + # FIXME: This is a bug of parallel.do + x.stop_gradient = False + x = yield x + hidden = fluid.layers.fc(input=x, size=200, param_attr='fc1.w') + loss = fluid.layers.mean(x=hidden) + yield loss + + self.run_test( + callback=__network__, + feed={ + 'img': + numpy.random.random(size=(128 * 3, 784)).astype('float32') + }, + fetch='fc1.w@GRAD') if __name__ == '__main__': diff --git a/python/paddle/v2/fluid/tests/test_pool2d_op.py b/python/paddle/v2/fluid/tests/test_pool2d_op.py index 5dff6270f455395ce6ca8ae2428236f630467095..71accc3f65bb2d65ad7e7c83eb15242f0e1c8aa4 100644 --- a/python/paddle/v2/fluid/tests/test_pool2d_op.py +++ b/python/paddle/v2/fluid/tests/test_pool2d_op.py @@ -1,5 +1,7 @@ import unittest import numpy as np + +import paddle.v2.fluid.core as core from op_test import OpTest @@ -44,6 +46,7 @@ def avg_pool2D_forward_naive(x, ksize, strides, paddings, global_pool=0): class TestPool2d_Op(OpTest): def setUp(self): + self.use_cudnn = False self.init_test_case() self.init_global_pool() self.init_op_type() @@ -62,15 +65,25 @@ class TestPool2d_Op(OpTest): 'ksize': self.ksize, 'pooling_type': self.pool_type, 'global_pooling': self.global_pool, + 'use_cudnn': self.use_cudnn, + 'data_format': 'AnyLayout' # TODO(dzhwinter) : should be fix latter } self.outputs = {'Out': output.astype('float32')} def test_check_output(self): - self.check_output() + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_output_with_place(place, atol=1e-5) + else: + self.check_output() def test_check_grad(self): - if self.pool_type != "max": + if self.use_cudnn and self.pool_type != "max": + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, set(['X']), 'Out', max_relative_error=0.07) + elif self.pool_type != "max": self.check_grad(set(['X']), 'Out', max_relative_error=0.07) def init_test_case(self): @@ -153,35 +166,41 @@ class TestCase5(TestCase2): self.pool2D_forward_naive = max_pool2D_forward_naive -#--------------------test pool2d_cudnn-------------------- -class TestCudnnCase1(TestPool2d_Op): +#--------------------test pool2d-------------------- +class TestCUDNNCase1(TestPool2d_Op): def init_op_type(self): - self.op_type = "pool2d_cudnn" + self.use_cudnn = True + self.op_type = "pool2d" -class TestCudnnCase2(TestCase1): +class TestCUDNNCase2(TestCase1): def init_op_type(self): - self.op_type = "pool2d_cudnn" + self.use_cudnn = True + self.op_type = "pool2d" -class TestCudnnCase3(TestCase2): +class TestCUDNNCase3(TestCase2): def init_op_type(self): - self.op_type = "pool2d_cudnn" + self.use_cudnn = True + self.op_type = "pool2d" -class TestCudnnCase4(TestCase3): +class TestCUDNNCase4(TestCase3): def init_op_type(self): - self.op_type = "pool2d_cudnn" + self.use_cudnn = True + self.op_type = "pool2d" -class TestCudnnCase5(TestCase4): +class TestCUDNNCase5(TestCase4): def init_op_type(self): - self.op_type = "pool2d_cudnn" + self.use_cudnn = True + self.op_type = "pool2d" -class TestCudnnCase6(TestCase5): +class TestCUDNNCase6(TestCase5): def init_op_type(self): - self.op_type = "pool2d_cudnn" + self.use_cudnn = True + self.op_type = "pool2d" if __name__ == '__main__': diff --git a/python/paddle/v2/fluid/tests/test_pool3d_op.py b/python/paddle/v2/fluid/tests/test_pool3d_op.py index 2ba86665a7d207e61159c02643fa40daca3be080..8f410862aff5af633968d4c3c919563c874cc200 100644 --- a/python/paddle/v2/fluid/tests/test_pool3d_op.py +++ b/python/paddle/v2/fluid/tests/test_pool3d_op.py @@ -1,5 +1,7 @@ import unittest import numpy as np + +import paddle.v2.fluid.core as core from op_test import OpTest @@ -52,6 +54,7 @@ def avg_pool3D_forward_naive(x, ksize, strides, paddings, global_pool=0): class TestPool3d_Op(OpTest): def setUp(self): + self.use_cudnn = False self.init_test_case() self.init_global_pool() self.init_op_type() @@ -71,15 +74,25 @@ class TestPool3d_Op(OpTest): 'ksize': self.ksize, 'pooling_type': self.pool_type, 'global_pooling': self.global_pool, + 'use_cudnn': self.use_cudnn, + 'data_format': 'AnyLayout' # TODO(dzhwinter) : should be fix latter } self.outputs = {'Out': output.astype('float32')} def test_check_output(self): - self.check_output() + if self.use_cudnn: + place = core.CUDAPlace(0) + self.check_output_with_place(place, atol=1e-5) + else: + self.check_output() def test_check_grad(self): - if self.pool_type != "max": + if self.use_cudnn and self.pool_type != "max": + place = core.CUDAPlace(0) + self.check_grad_with_place( + place, set(['X']), 'Out', max_relative_error=0.07) + elif self.pool_type != "max": self.check_grad(set(['X']), 'Out', max_relative_error=0.07) def init_test_case(self): @@ -163,35 +176,41 @@ class TestCase5(TestCase2): self.pool3D_forward_naive = max_pool3D_forward_naive -#--------------------test pool3d_cudnn-------------------- -class TestCudnnCase1(TestPool3d_Op): +#--------------------test pool3d-------------------- +class TestCUDNNCase1(TestPool3d_Op): def init_op_type(self): - self.op_type = "pool3d_cudnn" + self.use_cudnn = True + self.op_type = "pool3d" -class TestCudnnCase2(TestCase1): +class TestCUDNNCase2(TestCase1): def init_op_type(self): - self.op_type = "pool3d_cudnn" + self.use_cudnn = True + self.op_type = "pool3d" -class TestCudnnCase3(TestCase2): +class TestCUDNNCase3(TestCase2): def init_op_type(self): - self.op_type = "pool3d_cudnn" + self.use_cudnn = True + self.op_type = "pool3d" -class TestCudnnCase4(TestCase3): +class TestCUDNNCase4(TestCase3): def init_op_type(self): - self.op_type = "pool3d_cudnn" + self.use_cudnn = True + self.op_type = "pool3d" -class TestCudnnCase5(TestCase4): +class TestCUDNNCase5(TestCase4): def init_op_type(self): - self.op_type = "pool3d_cudnn" + self.use_cudnn = True + self.op_type = "pool3d" -class TestCudnnCase6(TestCase5): +class TestCUDNNCase6(TestCase5): def init_op_type(self): - self.op_type = "pool3d_cudnn" + self.use_cudnn = True + self.op_type = "pool3d" if __name__ == '__main__': diff --git a/python/paddle/v2/fluid/tests/test_print_op.py b/python/paddle/v2/fluid/tests/test_print_op.py new file mode 100644 index 0000000000000000000000000000000000000000..86a701a020fc197d69d113f82a4e5ac58f377179 --- /dev/null +++ b/python/paddle/v2/fluid/tests/test_print_op.py @@ -0,0 +1,21 @@ +import unittest +import numpy as np +from paddle.v2.fluid.executor import Executor +import paddle.v2.fluid.core as core +import paddle.v2.fluid.layers as pd + + +class TestSumOp(unittest.TestCase): + def test_tensor(self): + i = pd.zeros(shape=[2, 10], dtype='float32') + + pd.Print(i, message="I am a message", summarize=10) + + cpu = core.CPUPlace() + exe = Executor(cpu) + + exe.run() + + +if __name__ == '__main__': + unittest.main() diff --git a/python/paddle/v2/fluid/tests/test_sequence_erase_op.py b/python/paddle/v2/fluid/tests/test_sequence_erase_op.py new file mode 100644 index 0000000000000000000000000000000000000000..bf257fefea0d98c6f4d9860dbac4ccedf59bcdd9 --- /dev/null +++ b/python/paddle/v2/fluid/tests/test_sequence_erase_op.py @@ -0,0 +1,35 @@ +import unittest +import numpy as np +from op_test import OpTest + + +def sequence_erase(in_seq, lod0, tokens): + new_lod0 = [0] + out_seq = [] + for i in range(0, len(lod0) - 1): + num_out = 0 + for dat in in_seq[lod0[i]:lod0[i + 1]]: + if dat not in tokens: + out_seq.append(dat) + num_out += 1 + new_lod0.append(new_lod0[-1] + num_out) + return np.array(out_seq).astype("int32"), new_lod0 + + +class TestSequenceEraseOp(OpTest): + def setUp(self): + self.op_type = "sequence_erase" + in_seq = np.random.randint(0, 10, (30, 1)).astype("int32") + lod = [[0, 9, 13, 24, 30]] + tokens = [2, 3, 5] + out_seq, new_lod0 = sequence_erase(in_seq, lod[0], tokens) + self.attrs = {'tokens': tokens} + self.inputs = {'X': (in_seq, lod)} + self.outputs = {'Out': (out_seq, [new_lod0])} + + def test_check_output(self): + self.check_output() + + +if __name__ == '__main__': + unittest.main() diff --git a/python/paddle/v2/fluid/tests/test_shrink_rnn_memory.py b/python/paddle/v2/fluid/tests/test_shrink_rnn_memory.py index be1588fc2d09fa58882425eb3d080ef1560ebc79..a14721b9aacfa7437623024af41555fd26990499 100644 --- a/python/paddle/v2/fluid/tests/test_shrink_rnn_memory.py +++ b/python/paddle/v2/fluid/tests/test_shrink_rnn_memory.py @@ -3,43 +3,86 @@ import paddle.v2.fluid.core as core from paddle.v2.fluid.executor import Executor import paddle.v2.fluid.layers as layers from paddle.v2.fluid.backward import append_backward -from paddle.v2.fluid.framework import default_main_program -import numpy +from paddle.v2.fluid.framework import default_main_program, switch_main_program +from paddle.v2.fluid.framework import Program +import numpy as np -main_program = default_main_program() - -class TestShrinkRNNMemory(unittest.TestCase): - def test_shrink_rnn_memory(self): +class TestShrinkRNNMemoryBase(unittest.TestCase): + def setUp(self): + self.main_program = Program() + switch_main_program(self.main_program) x = layers.data('x', shape=[100], dtype='float32') x.stop_gradient = False - table = layers.lod_rank_table(x=x) + rank_table_tensor = layers.data( + 'rank_table_tensor', shape=[1], dtype='float32', lod_level=1) + table = layers.lod_rank_table(x=rank_table_tensor) i = layers.zeros(dtype='int64', shape=[1]) - mem1 = layers.shrink_memory(x=x, i=i, table=table) + self.mem1 = layers.shrink_memory(x=x, i=i, table=table) i = layers.increment(x=i) i.stop_gradient = True - mem2 = layers.shrink_memory(x=mem1, i=i, table=table) + self.mem2 = layers.shrink_memory(x=self.mem1, i=i, table=table) i = layers.increment(x=i) i.stop_gradient = True - mem3 = layers.shrink_memory(x=mem2, i=i, table=table) + self.mem3 = layers.shrink_memory(x=self.mem2, i=i, table=table) + mem3_mean = layers.mean(x=self.mem3) + append_backward(loss=mem3_mean) + self.x_grad = self.main_program.global_block().var('x@GRAD') + + def sum_lodtensor(self, tensor): + sum_res = 0.0 + for i in xrange(np.product(tensor.get_dims())): + sum_res += tensor.get_float_element(i) + return sum_res + +class TestShrinkRNNMemoryReferLoD(TestShrinkRNNMemoryBase): + def test_refer_lod(self): cpu = core.CPUPlace() - tensor = core.LoDTensor() - tensor.set_lod([[0, 2, 5, 6]]) - tensor_np = numpy.random.random(size=(3, 100)).astype('float32') - tensor.set(tensor_np, cpu) + x_tensor = core.LoDTensor() + x_tensor.set_lod([[0, 2, 5, 6]]) + tensor_np = np.random.random(size=(6, 100)).astype('float32') + x_tensor.set(tensor_np, cpu) + + rank_table_tensor = core.LoDTensor() + rank_table_tensor.set_lod([[0, 1, 3, 6]]) + rank_table_tensor.set(np.random.random(size=(6, 1)).astype('float32'), + cpu) + exe = Executor(cpu) - outs = exe.run(feed={'x': tensor}, fetch_list=[mem1, mem2, mem3]) - self.assertTrue(numpy.allclose(tensor_np[0:3], outs[0])) - self.assertTrue(numpy.allclose(tensor_np[0:2], outs[1])) - self.assertTrue(numpy.allclose(tensor_np[0:1], outs[2])) + outs = exe.run( + feed={'x': x_tensor, + 'rank_table_tensor': rank_table_tensor}, + fetch_list=[self.mem1, self.mem2, self.mem3, self.x_grad], + return_numpy=False) + self.assertTrue(np.allclose(tensor_np[0:6], outs[0])) + self.assertTrue(np.allclose(tensor_np[0:5], outs[1])) + self.assertTrue(np.allclose(tensor_np[0:2], outs[2])) + self.assertAlmostEqual(1.0, self.sum_lodtensor(outs[3]), delta=0.01) - mem3_mean = layers.mean(x=mem3) - append_backward(loss=mem3_mean) - x_grad = exe.run( - feed={'x': tensor}, - fetch_list=[main_program.global_block().var('x@GRAD')])[0] - self.assertAlmostEqual(1.0, x_grad.sum(), delta=0.1) + +class TestShrinkRNNMemoryNoLoD(TestShrinkRNNMemoryBase): + def test_no_lod(self): + cpu = core.CPUPlace() + x_tensor = core.LoDTensor() + tensor_np = np.random.random(size=(3, 100)).astype('float32') + x_tensor.set(tensor_np, cpu) + + rank_table_tensor = core.LoDTensor() + rank_table_tensor.set_lod([[0, 1, 3, 6]]) + rank_table_tensor.set(np.random.random(size=(6, 1)).astype('float32'), + cpu) + + exe = Executor(cpu) + outs = exe.run( + feed={'x': x_tensor, + 'rank_table_tensor': rank_table_tensor}, + fetch_list=[self.mem1, self.mem2, self.mem3, self.x_grad], + return_numpy=False) + self.assertTrue(np.allclose(tensor_np[0:3], outs[0])) + self.assertTrue(np.allclose(tensor_np[0:2], outs[1])) + self.assertTrue(np.allclose(tensor_np[0:1], outs[2])) + self.assertAlmostEqual(1.0, self.sum_lodtensor(outs[3]), delta=0.01) if __name__ == '__main__': diff --git a/python/setup.py.in b/python/setup.py.in index 66ccfe808763d0e157f866ce08868e3fdebdea79..65ec58ecf98e693ecf02922129f6eef13cbe5303 100644 --- a/python/setup.py.in +++ b/python/setup.py.in @@ -31,6 +31,7 @@ patch = '%(patch)d' rc = '%(rc)d' istaged = %(istaged)s commit = '%(commit)s' +with_mkl = '%(with_mkl)s' def show(): if istaged: @@ -41,6 +42,9 @@ def show(): print 'rc:', rc else: print 'commit:', commit + +def mkl(): + return with_mkl ''' commit = git_commit() with open(filename, 'w') as f: @@ -51,7 +55,8 @@ def show(): 'rc': RC, 'version': '${PADDLE_VERSION}', 'commit': commit, - 'istaged': ISTAGED}) + 'istaged': ISTAGED, + 'with_mkl': '@WITH_MKL@'}) write_version_py(filename='@PADDLE_SOURCE_DIR@/python/paddle/version.py') diff --git a/tools/manylinux1/Dockerfile.android b/tools/manylinux1/Dockerfile.android new file mode 100644 index 0000000000000000000000000000000000000000..b6cae228a0c45ab70ba8ecc80ae4df7e0fa5bdbc --- /dev/null +++ b/tools/manylinux1/Dockerfile.android @@ -0,0 +1,55 @@ +FROM ubuntu:16.04 +MAINTAINER PaddlePaddle Authors + +ARG UBUNTU_MIRROR +RUN /bin/bash -c 'if [[ -n ${UBUNTU_MIRROR} ]]; then sed -i 's#http://archive.ubuntu.com/ubuntu#${UBUNTU_MIRROR}#g' /etc/apt/sources.list; fi' + +# ENV variables +ARG ANDROID_ABI +ARG ANDROID_API + +ENV ANDROID_ABI=${ANDROID_ABI:-"armeabi-v7a"} +ENV ANDROID_API=${ANDROID_API:-21} + +ENV HOME=/root \ + ANDROID_NDK_HOME=/opt/android-ndk-linux \ + ANDROID_TOOLCHAINS_DIR=/opt/toolchains + +RUN apt-get update && \ + apt-get install -y \ + git python-dev python-pip python-numpy \ + wget curl tar unzip gcc g++ locales clang-format-3.8 swig cmake && \ + apt-get clean -y + +# Install Go and glide +RUN wget -qO- go.tgz https://storage.googleapis.com/golang/go1.8.1.linux-amd64.tar.gz | \ + tar -xz -C /usr/local && \ + mkdir /root/gopath && \ + mkdir /root/gopath/bin && \ + mkdir /root/gopath/src +ENV GOROOT=/usr/local/go GOPATH=/root/gopath +# should not be in the same line with GOROOT definition, otherwise docker build could not find GOROOT. +ENV PATH=${PATH}:${GOROOT}/bin:${GOPATH}/bin + +# git credential to skip password typing +RUN git config --global credential.helper store + +# Fix locales to en_US.UTF-8 +RUN localedef -i en_US -f UTF-8 en_US.UTF-8 + +RUN pip install --upgrade pip && \ + pip install -U 'protobuf==3.1.0' && \ + pip install -U wheel sphinx && \ + pip install pre-commit + +# Android NDK +RUN mkdir -p ${ANDROID_TOOLCHAINS_DIR} && \ + mkdir -p /opt/android-ndk-tmp && \ + cd /opt/android-ndk-tmp && \ + wget -q https://dl.google.com/android/repository/android-ndk-r14b-linux-x86_64.zip && \ + unzip -q android-ndk-r14b-linux-x86_64.zip && \ + mv android-ndk-r14b ${ANDROID_NDK_HOME} && \ + rm -rf /opt/android-ndk-tmp + +CMD ["bash", "/paddle/paddle/scripts/docker/build_android.sh"] + diff --git a/tools/manylinux1/Dockerfile.x64 b/tools/manylinux1/Dockerfile.x64 new file mode 100644 index 0000000000000000000000000000000000000000..2c6ba650a5d7996bef212e88a16f2a159ca377e7 --- /dev/null +++ b/tools/manylinux1/Dockerfile.x64 @@ -0,0 +1,54 @@ +# NOTE The manylinux1 policy mandates CentOS-5. We replace it with CentOS-6 in +# order to satisfy the build of capnproto library (a nupic.core dependency), +# which requires some headers and symbols not present on CentOS-5 (e.g., +# signalfd.h, pipe2, O_NONBLOCK, SOCK_NONBLOCK, etc.). See +# https://github.com/sandstorm-io/capnproto/issues/350. +FROM nvidia/cuda: +MAINTAINER Numenta, based on the ManyLinux project + +ENV LC_ALL en_US.UTF-8 +ENV LANG en_US.UTF-8 +ENV LANGUAGE en_US.UTF-8 +ENV PATH /opt/rh/devtoolset-2/root/usr/bin:$PATH +ENV LD_LIBRARY_PATH /opt/rh/devtoolset-2/root/usr/lib64:/opt/rh/devtoolset-2/root/usr/lib:/usr/local/lib64:/usr/local/lib:${LD_LIBRARY_PATH} +ENV PKG_CONFIG_PATH=/usr/local/lib/pkgconfig + +COPY build_scripts /build_scripts +RUN bash build_scripts/build.sh && rm -r build_scripts + +ENV SSL_CERT_FILE=/opt/_internal/certs.pem + +# for paddle +RUN wget --no-check-certificate -qO- https://storage.googleapis.com/golang/go1.8.1.linux-amd64.tar.gz | \ + tar -xz -C /usr/local && \ + mkdir /root/gopath && \ + mkdir /root/gopath/bin && \ + mkdir /root/gopath/src + + +ENV GOROOT=/usr/local/go GOPATH=/root/gopath +ENV PATH=${GOROOT}/bin:${GOPATH}/bin:${PATH} + +# protobuf 3.1.0 +RUN cd /opt && wget -q --no-check-certificate https://github.com/google/protobuf/releases/download/v3.1.0/protobuf-cpp-3.1.0.tar.gz && \ + tar xzf protobuf-cpp-3.1.0.tar.gz && \ + cd protobuf-3.1.0 && ./configure && make -j4 && make install && cd .. && rm -f protobuf-cpp-3.1.0.tar.gz + + +RUN yum install -y sqlite-devel zlib-devel openssl-devel boost boost-devel pcre-devel vim tk-devel tkinter libtool + +RUN wget -O /root/requirements.txt https://raw.githubusercontent.com/PaddlePaddle/Paddle/develop/python/requirements.txt + +RUN LD_LIBRARY_PATH=/opt/_internal/cpython-2.7.11-ucs4/lib:${LD_LIBRARY_PATH} /opt/python/cp27-cp27mu/bin/pip install -r /root/requirements.txt && \ + LD_LIBRARY_PATH=/opt/_internal/cpython-2.7.11-ucs2/lib:${LD_LIBRARY_PATH} /opt/python/cp27-cp27m/bin/pip install -r /root/requirements.txt && \ + go get github.com/Masterminds/glide && \ + rm -rf /root/requirements.txt + +RUN LD_LIBRARY_PATH=/opt/_internal/cpython-2.7.11-ucs4/lib:${LD_LIBRARY_PATH} /opt/python/cp27-cp27mu/bin/pip install pre-commit 'ipython==5.3.0' opencv-python && \ + LD_LIBRARY_PATH=/opt/_internal/cpython-2.7.11-ucs2/lib:${LD_LIBRARY_PATH} /opt/python/cp27-cp27m/bin/pip install pre-commit 'ipython==5.3.0' opencv-python + +RUN wget -O /opt/swig-2.0.12.tar.gz https://sourceforge.net/projects/swig/files/swig/swig-2.0.12/swig-2.0.12.tar.gz/download && \ + cd /opt && tar xzf swig-2.0.12.tar.gz && cd /opt/swig-2.0.12 && ./configure && make && make install && cd /opt && rm swig-2.0.12.tar.gz + +RUN mkdir -p /src && cd /src && git clone https://github.com/NVIDIA/nccl.git nccl && cd nccl &&\ + make -j `nproc` install && cd .. && rm -rf nccl diff --git a/tools/manylinux1/README.md b/tools/manylinux1/README.md new file mode 100644 index 0000000000000000000000000000000000000000..cb0a9ac22cda6fb6f585ab8fd95179573c760f28 --- /dev/null +++ b/tools/manylinux1/README.md @@ -0,0 +1,30 @@ +# buildtools + +We release PaddlePaddle and PaddlePaddle Fluid as shared libraries, +which, we hope could be released as wheel packages on PyPI, so we need +to make sure that the build follows the +[manulinux1](https://www.python.org/dev/peps/pep-0513/) standard. + +The manylinux standard suggests building Python modules on an old +system, because that a module would anyway depend on some shared +libraries, and Linux's shared library standard states that those built +with newer version compilers cannot work with those with older +versions. The suggested building environment is as old as CentOS 5. +However, PaddlePaddle relies on CUDA, and the earlies version of +[CentOS works with CUDA is 6](https://hub.docker.com/r/nvidia/cuda/). +So, here we provide a Docker image basing on CentOS 6 and CUDA for +building PaddlePaddle and making the release supports "as-manylinux as +possible." or "sufficiently many Linux" according to [this +discussion](https://mail.python.org/pipermail/wheel-builders/2016-July/000175.html). + +The build output of our Docker image includes multiple wheel files -- +some contain the CPU-only binary, some others support CUDA; some are +compatible with the cp27m Python ABI, some others with cp27. + +To build these wheels, please run the following commands: + +```bash +git clone https://github.com/paddlepaddle/paddle +cd paddle/tools/manylinux1 +REPO=[yourrepo] ./build_all.sh +``` diff --git a/tools/manylinux1/build_all.sh b/tools/manylinux1/build_all.sh new file mode 100755 index 0000000000000000000000000000000000000000..097bedb5265d00f8aa362bb0272af633c97192ba --- /dev/null +++ b/tools/manylinux1/build_all.sh @@ -0,0 +1,26 @@ +#!/bin/bash +set -xe + +REPO="${REPO:-typhoon1986}" + +# NOTE: version matches are determined! +sed 's//7.5-cudnn5-devel-centos6/g' Dockerfile.x64 | \ +sed 's//NVCC_GENCODE="-gencode=arch=compute_35,code=sm_35 -gencode=arch=compute_50,code=sm_50 -gencode=arch=compute_52,code=sm_52"/g'> Dockerfile.tmp +docker build -t ${REPO}/paddle_manylinux_devel:cuda7.5_cudnn5 -f Dockerfile.tmp . +docker push ${REPO}/paddle_manylinux_devel:cuda7.5_cudnn5 + +sed 's//8.0-cudnn5-devel-centos6/g' Dockerfile.x64 | \ +sed 's//NVCC_GENCODE="-gencode=arch=compute_35,code=sm_35 -gencode=arch=compute_50,code=sm_50 -gencode=arch=compute_52,code=sm_52 -gencode=arch=compute_60,code=sm_60 -gencode=arch=compute_60,code=compute_60 -gencode=arch=compute_61,code=sm_61 -gencode=arch=compute_62,code=sm_62"/g'> Dockerfile.tmp +docker build -t ${REPO}/paddle_manylinux_devel:cuda8.0_cudnn5 -f Dockerfile.tmp . +docker push ${REPO}/paddle_manylinux_devel:cuda8.0_cudnn5 + +sed 's//8.0-cudnn7-devel-centos6/g' Dockerfile.x64 | \ +sed 's//NVCC_GENCODE="-gencode=arch=compute_35,code=sm_35 -gencode=arch=compute_50,code=sm_50 -gencode=arch=compute_52,code=sm_52 -gencode=arch=compute_60,code=sm_60 -gencode=arch=compute_60,code=compute_60 -gencode=arch=compute_61,code=sm_61 -gencode=arch=compute_62,code=sm_62"/g'> Dockerfile.tmp + +docker build -t ${REPO}/paddle_manylinux_devel:cuda8.0_cudnn7 -f Dockerfile.tmp . +docker push ${REPO}/paddle_manylinux_devel:cuda8.0_cudnn7 + +sed 's//9.0-cudnn7-devel-centos6/g' Dockerfile.x64 | \ +sed 's//NVCC_GENCODE="-gencode=arch=compute_35,code=sm_35 -gencode=arch=compute_50,code=sm_50 -gencode=arch=compute_52,code=sm_52 -gencode=arch=compute_60,code=sm_60 -gencode=arch=compute_60,code=compute_60 -gencode=arch=compute_61,code=sm_61 -gencode=arch=compute_62,code=sm_62 -gencode=arch=compute_70,code=sm_70"/g'> Dockerfile.tmp +docker build -t ${REPO}/paddle_manylinux_devel:cuda9.0_cudnn7 -f Dockerfile.tmp . +docker push ${REPO}/paddle_manylinux_devel:cuda9.0_cudnn7 diff --git a/tools/manylinux1/build_scripts/build.sh b/tools/manylinux1/build_scripts/build.sh new file mode 100644 index 0000000000000000000000000000000000000000..93591fa9ddad8a78df344e1e912a5f1c7e93dfa4 --- /dev/null +++ b/tools/manylinux1/build_scripts/build.sh @@ -0,0 +1,152 @@ +#!/bin/bash +# Top-level build script called from Dockerfile + +# Stop at any error, show all commands +set -ex + +# Python versions to be installed in /opt/$VERSION_NO +# NOTE Only need python 2.7.11 for nupic.core/nupic.bindings at this time, so +# remove others to expedite build and reduce docker image size. The original +# manylinux docker image project builds many python versions. +# NOTE We added back 3.5.1, since auditwheel requires python 3.3+ +CPYTHON_VERSIONS="2.7.11 3.5.1" + +# openssl version to build, with expected sha256 hash of .tar.gz +# archive +OPENSSL_ROOT=openssl-1.0.2l +OPENSSL_HASH=ce07195b659e75f4e1db43552860070061f156a98bb37b672b101ba6e3ddf30c +EPEL_RPM_HASH=e5ed9ecf22d0c4279e92075a64c757ad2b38049bcf5c16c4f2b75d5f6860dc0d +DEVTOOLS_HASH=a8ebeb4bed624700f727179e6ef771dafe47651131a00a78b342251415646acc +PATCHELF_HASH=d9afdff4baeacfbc64861454f368b7f2c15c44d245293f7587bbf726bfe722fb +CURL_ROOT=curl-7.49.1 +CURL_HASH=eb63cec4bef692eab9db459033f409533e6d10e20942f4b060b32819e81885f1 +AUTOCONF_ROOT=autoconf-2.69 +AUTOCONF_HASH=954bd69b391edc12d6a4a51a2dd1476543da5c6bbf05a95b59dc0dd6fd4c2969 + +# Dependencies for compiling Python that we want to remove from +# the final image after compiling Python +PYTHON_COMPILE_DEPS="zlib-devel bzip2-devel ncurses-devel sqlite-devel readline-devel tk-devel gdbm-devel db4-devel libpcap-devel xz-devel" + +# Libraries that are allowed as part of the manylinux1 profile +MANYLINUX1_DEPS="glibc-devel libstdc++-devel glib2-devel libX11-devel libXext-devel libXrender-devel mesa-libGL-devel libICE-devel libSM-devel ncurses-devel" + +# Get build utilities +MY_DIR=$(dirname "${BASH_SOURCE[0]}") +source $MY_DIR/build_utils.sh + +# EPEL support +yum -y install wget curl +curl -sLO https://dl.fedoraproject.org/pub/epel/6/x86_64/epel-release-6-8.noarch.rpm +check_sha256sum epel-release-6-8.noarch.rpm $EPEL_RPM_HASH + +# Dev toolset (for LLVM and other projects requiring C++11 support) +curl -sLO http://people.centos.org/tru/devtools-2/devtools-2.repo +check_sha256sum devtools-2.repo $DEVTOOLS_HASH +mv devtools-2.repo /etc/yum.repos.d/devtools-2.repo +rpm -Uvh --replacepkgs epel-release-6*.rpm +rm -f epel-release-6*.rpm + +# Development tools and libraries +yum -y install bzip2 make git patch unzip bison yasm diffutils \ + automake which file \ + kernel-devel-`uname -r` \ + devtoolset-2-binutils devtoolset-2-gcc \ + devtoolset-2-gcc-c++ devtoolset-2-gcc-gfortran \ + ${PYTHON_COMPILE_DEPS} + +# Install more recent version of cmake +# curl -O https://cmake.org/files/v3.8/cmake-3.8.1-Linux-x86_64.sh +# /bin/sh cmake-3.8.1-Linux-x86_64.sh --prefix=/usr/local --skip-license +# rm cmake-3.8.1-Linux-x86_64.sh + +wget -q https://cmake.org/files/v3.5/cmake-3.5.2.tar.gz && tar xzf cmake-3.5.2.tar.gz && \ +cd cmake-3.5.2 && ./bootstrap && \ +make -j4 && make install && cd .. && rm cmake-3.5.2.tar.gz + + +# Install newest autoconf +build_autoconf $AUTOCONF_ROOT $AUTOCONF_HASH +autoconf --version + +# Compile the latest Python releases. +# (In order to have a proper SSL module, Python is compiled +# against a recent openssl [see env vars above], which is linked +# statically. We delete openssl afterwards.) +build_openssl $OPENSSL_ROOT $OPENSSL_HASH +mkdir -p /opt/python +build_cpythons $CPYTHON_VERSIONS + +PY35_BIN=/opt/python/cp35-cp35m/bin +# NOTE Since our custom manylinux image builds pythons with shared +# libpython, we need to add libpython's dir to LD_LIBRARY_PATH before running +# python. +ORIGINAL_LD_LIBRARY_PATH="${LD_LIBRARY_PATH}" +LD_LIBRARY_PATH="${ORIGINAL_LD_LIBRARY_PATH}:$(dirname ${PY35_BIN})/lib" + +# Our openssl doesn't know how to find the system CA trust store +# (https://github.com/pypa/manylinux/issues/53) +# And it's not clear how up-to-date that is anyway +# So let's just use the same one pip and everyone uses +LD_LIBRARY_PATH="${ORIGINAL_LD_LIBRARY_PATH}:$(dirname ${PY35_BIN})/lib" $PY35_BIN/pip install certifi +ln -s $($PY35_BIN/python -c 'import certifi; print(certifi.where())') \ + /opt/_internal/certs.pem +# If you modify this line you also have to modify the versions in the +# Dockerfiles: +export SSL_CERT_FILE=/opt/_internal/certs.pem + +# Install newest curl +build_curl $CURL_ROOT $CURL_HASH +rm -rf /usr/local/include/curl /usr/local/lib/libcurl* /usr/local/lib/pkgconfig/libcurl.pc +hash -r +curl --version +curl-config --features + +# Now we can delete our built SSL +rm -rf /usr/local/ssl + +# Install patchelf (latest with unreleased bug fixes) +curl -sLO https://nipy.bic.berkeley.edu/manylinux/patchelf-0.9njs2.tar.gz +check_sha256sum patchelf-0.9njs2.tar.gz $PATCHELF_HASH +tar -xzf patchelf-0.9njs2.tar.gz +(cd patchelf-0.9njs2 && ./configure && make && make install) +rm -rf patchelf-0.9njs2.tar.gz patchelf-0.9njs2 + +# Install latest pypi release of auditwheel +LD_LIBRARY_PATH="${ORIGINAL_LD_LIBRARY_PATH}:$(dirname ${PY35_BIN})/lib" $PY35_BIN/pip install auditwheel +ln -s $PY35_BIN/auditwheel /usr/local/bin/auditwheel + +# Clean up development headers and other unnecessary stuff for +# final image +yum -y erase wireless-tools gtk2 libX11 hicolor-icon-theme \ + avahi freetype bitstream-vera-fonts \ + ${PYTHON_COMPILE_DEPS} > /dev/null 2>&1 +yum -y install ${MANYLINUX1_DEPS} +yum -y clean all > /dev/null 2>&1 +yum list installed +# we don't need libpython*.a, and they're many megabytes +find /opt/_internal -name '*.a' -print0 | xargs -0 rm -f +# Strip what we can -- and ignore errors, because this just attempts to strip +# *everything*, including non-ELF files: +find /opt/_internal -type f -print0 \ + | xargs -0 -n1 strip --strip-unneeded 2>/dev/null || true +# We do not need the Python test suites, or indeed the precompiled .pyc and +# .pyo files. Partially cribbed from: +# https://github.com/docker-library/python/blob/master/3.4/slim/Dockerfile +find /opt/_internal \ + \( -type d -a -name test -o -name tests \) \ + -o \( -type f -a -name '*.pyc' -o -name '*.pyo' \) \ + -print0 | xargs -0 rm -f + +for PYTHON in /opt/python/*/bin/python; do + # Add matching directory of libpython shared library to library lookup path + LD_LIBRARY_PATH="${ORIGINAL_LD_LIBRARY_PATH}:$(dirname $(dirname ${PYTHON}))/lib" + + # Smoke test to make sure that our Pythons work, and do indeed detect as + # being manylinux compatible: + LD_LIBRARY_PATH="${ORIGINAL_LD_LIBRARY_PATH}:$(dirname $(dirname ${PYTHON}))/lib" $PYTHON $MY_DIR/manylinux1-check.py + # Make sure that SSL cert checking works + LD_LIBRARY_PATH="${ORIGINAL_LD_LIBRARY_PATH}:$(dirname $(dirname ${PYTHON}))/lib" $PYTHON $MY_DIR/ssl-check.py +done + +# Restore LD_LIBRARY_PATH +LD_LIBRARY_PATH="${ORIGINAL_LD_LIBRARY_PATH}" diff --git a/tools/manylinux1/build_scripts/build_utils.sh b/tools/manylinux1/build_scripts/build_utils.sh new file mode 100755 index 0000000000000000000000000000000000000000..10422ae3bd00f4e0dd059af0384f8cc17e4b7855 --- /dev/null +++ b/tools/manylinux1/build_scripts/build_utils.sh @@ -0,0 +1,173 @@ +#!/bin/bash +# Helper utilities for build + +PYTHON_DOWNLOAD_URL=https://www.python.org/ftp/python +# XXX: the official https server at www.openssl.org cannot be reached +# with the old versions of openssl and curl in Centos 5.11 hence the fallback +# to the ftp mirror: +# OPENSSL_DOWNLOAD_URL=ftp://ftp.openssl.org/source +OPENSSL_DOWNLOAD_URL=https://www.openssl.org/source +# Ditto the curl sources +CURL_DOWNLOAD_URL=http://curl.askapache.com/download + +GET_PIP_URL=https://bootstrap.pypa.io/get-pip.py + +AUTOCONF_DOWNLOAD_URL=http://ftp.gnu.org/gnu/autoconf + + +function check_var { + if [ -z "$1" ]; then + echo "required variable not defined" + exit 1 + fi +} + + +function lex_pyver { + # Echoes Python version string padded with zeros + # Thus: + # 3.2.1 -> 003002001 + # 3 -> 003000000 + echo $1 | awk -F "." '{printf "%03d%03d%03d", $1, $2, $3}' +} + + +function do_cpython_build { + local py_ver=$1 + check_var $py_ver + local ucs_setting=$2 + check_var $ucs_setting + tar -xzf Python-$py_ver.tgz + pushd Python-$py_ver + if [ "$ucs_setting" = "none" ]; then + unicode_flags="" + dir_suffix="" + else + local unicode_flags="--enable-unicode=$ucs_setting" + local dir_suffix="-$ucs_setting" + fi + local prefix="/opt/_internal/cpython-${py_ver}${dir_suffix}" + mkdir -p ${prefix}/lib + # -Wformat added for https://bugs.python.org/issue17547 on Python 2.6 + + # NOTE --enable-shared for generating libpython shared library needed for + # linking of some of the nupic.core test executables. + CFLAGS="-Wformat" ./configure --prefix=${prefix} --enable-shared $unicode_flags > /dev/null + make -j2 > /dev/null + make install > /dev/null + popd + echo "ZZZ looking for libpython" + find / -name 'libpython*.so*' + rm -rf Python-$py_ver + # Some python's install as bin/python3. Make them available as + # bin/python. + if [ -e ${prefix}/bin/python3 ]; then + ln -s python3 ${prefix}/bin/python + fi + # NOTE Make libpython shared library visible to python calls below + LD_LIBRARY_PATH="${prefix}/lib" ${prefix}/bin/python get-pip.py + LD_LIBRARY_PATH="${prefix}/lib" ${prefix}/bin/pip install wheel + local abi_tag=$(LD_LIBRARY_PATH="${prefix}/lib" ${prefix}/bin/python ${MY_DIR}/python-tag-abi-tag.py) + ln -s ${prefix} /opt/python/${abi_tag} +} + + +function build_cpython { + local py_ver=$1 + check_var $py_ver + check_var $PYTHON_DOWNLOAD_URL + wget -q $PYTHON_DOWNLOAD_URL/$py_ver/Python-$py_ver.tgz + if [ $(lex_pyver $py_ver) -lt $(lex_pyver 3.3) ]; then + # NOTE We only need wide unicode for nupic.bindings wheel + do_cpython_build $py_ver ucs2 + do_cpython_build $py_ver ucs4 + else + do_cpython_build $py_ver none + fi + rm -f Python-$py_ver.tgz +} + + +function build_cpythons { + check_var $GET_PIP_URL + curl -sLO $GET_PIP_URL + for py_ver in $@; do + build_cpython $py_ver + done + rm get-pip.py +} + + +function do_openssl_build { + ./config no-ssl2 no-shared -fPIC --prefix=/usr/local/ssl > /dev/null + make > /dev/null + make install > /dev/null +} + + +function check_sha256sum { + local fname=$1 + check_var ${fname} + local sha256=$2 + check_var ${sha256} + + echo "${sha256} ${fname}" > ${fname}.sha256 + sha256sum -c ${fname}.sha256 + rm ${fname}.sha256 +} + + +function build_openssl { + local openssl_fname=$1 + check_var ${openssl_fname} + local openssl_sha256=$2 + check_var ${openssl_sha256} + check_var ${OPENSSL_DOWNLOAD_URL} + curl -sLO ${OPENSSL_DOWNLOAD_URL}/${openssl_fname}.tar.gz + check_sha256sum ${openssl_fname}.tar.gz ${openssl_sha256} + tar -xzf ${openssl_fname}.tar.gz + (cd ${openssl_fname} && do_openssl_build) + rm -rf ${openssl_fname} ${openssl_fname}.tar.gz +} + + +function do_curl_build { + LIBS=-ldl ./configure --with-ssl --disable-shared > /dev/null + make > /dev/null + make install > /dev/null +} + + +function build_curl { + local curl_fname=$1 + check_var ${curl_fname} + local curl_sha256=$2 + check_var ${curl_sha256} + check_var ${CURL_DOWNLOAD_URL} + curl -sLO ${CURL_DOWNLOAD_URL}/${curl_fname}.tar.bz2 + check_sha256sum ${curl_fname}.tar.bz2 ${curl_sha256} + tar -jxf ${curl_fname}.tar.bz2 + (cd ${curl_fname} && do_curl_build) + rm -rf ${curl_fname} ${curl_fname}.tar.bz2 +} + + +function do_standard_install { + ./configure > /dev/null + make > /dev/null + make install > /dev/null +} + + +function build_autoconf { + local autoconf_fname=$1 + check_var ${autoconf_fname} + local autoconf_sha256=$2 + check_var ${autoconf_sha256} + check_var ${AUTOCONF_DOWNLOAD_URL} + curl -sLO ${AUTOCONF_DOWNLOAD_URL}/${autoconf_fname}.tar.gz + check_sha256sum ${autoconf_fname}.tar.gz ${autoconf_sha256} + tar -zxf ${autoconf_fname}.tar.gz + (cd ${autoconf_fname} && do_standard_install) + rm -rf ${autoconf_fname} ${autoconf_fname}.tar.gz +} diff --git a/tools/manylinux1/build_scripts/manylinux1-check.py b/tools/manylinux1/build_scripts/manylinux1-check.py new file mode 100644 index 0000000000000000000000000000000000000000..47fd3d673be662d2229480ee650dc3799301c31e --- /dev/null +++ b/tools/manylinux1/build_scripts/manylinux1-check.py @@ -0,0 +1,56 @@ +# Logic copied from PEP 513 + + +def is_manylinux1_compatible(): + # Only Linux, and only x86-64 / i686 + from distutils.util import get_platform + if get_platform() not in ["linux-x86_64", "linux-i686"]: + return False + + # Check for presence of _manylinux module + try: + import _manylinux + return bool(_manylinux.manylinux1_compatible) + except (ImportError, AttributeError): + # Fall through to heuristic check below + pass + + # Check glibc version. CentOS 5 uses glibc 2.5. + return have_compatible_glibc(2, 5) + + +def have_compatible_glibc(major, minimum_minor): + import ctypes + + process_namespace = ctypes.CDLL(None) + try: + gnu_get_libc_version = process_namespace.gnu_get_libc_version + except AttributeError: + # Symbol doesn't exist -> therefore, we are not linked to + # glibc. + return False + + # Call gnu_get_libc_version, which returns a string like "2.5". + gnu_get_libc_version.restype = ctypes.c_char_p + version_str = gnu_get_libc_version() + # py2 / py3 compatibility: + if not isinstance(version_str, str): + version_str = version_str.decode("ascii") + + # Parse string and check against requested version. + version = [int(piece) for piece in version_str.split(".")] + assert len(version) == 2 + if major != version[0]: + return False + if minimum_minor > version[1]: + return False + return True + + +import sys +if is_manylinux1_compatible(): + print("%s is manylinux1 compatible" % (sys.executable, )) + sys.exit(0) +else: + print("%s is NOT manylinux1 compatible" % (sys.executable, )) + sys.exit(1) diff --git a/tools/manylinux1/build_scripts/python-tag-abi-tag.py b/tools/manylinux1/build_scripts/python-tag-abi-tag.py new file mode 100644 index 0000000000000000000000000000000000000000..301fbf07a47fef03c91d9dd5f49c2894a5971319 --- /dev/null +++ b/tools/manylinux1/build_scripts/python-tag-abi-tag.py @@ -0,0 +1,7 @@ +# Utility script to print the python tag + the abi tag for a Python +# See PEP 425 for exactly what these are, but an example would be: +# cp27-cp27mu + +from wheel.pep425tags import get_abbr_impl, get_impl_ver, get_abi_tag + +print("{0}{1}-{2}".format(get_abbr_impl(), get_impl_ver(), get_abi_tag())) diff --git a/tools/manylinux1/build_scripts/ssl-check.py b/tools/manylinux1/build_scripts/ssl-check.py new file mode 100644 index 0000000000000000000000000000000000000000..a85d91978c510cccd366c174c317e6a3bdb589bd --- /dev/null +++ b/tools/manylinux1/build_scripts/ssl-check.py @@ -0,0 +1,32 @@ +# cf. https://github.com/pypa/manylinux/issues/53 + +GOOD_SSL = "https://google.com" +BAD_SSL = "https://self-signed.badssl.com" + +import sys + +print("Testing SSL certificate checking for Python:", sys.version) + +if (sys.version_info[:2] < (2, 7) or sys.version_info[:2] < (3, 4)): + print("This version never checks SSL certs; skipping tests") + sys.exit(0) + +if sys.version_info[0] >= 3: + from urllib.request import urlopen + EXC = OSError +else: + from urllib import urlopen + EXC = IOError + +print("Connecting to %s should work" % (GOOD_SSL, )) +urlopen(GOOD_SSL) +print("...it did, yay.") + +print("Connecting to %s should fail" % (BAD_SSL, )) +try: + urlopen(BAD_SSL) + # If we get here then we failed: + print("...it DIDN'T!!!!!11!!1one!") + sys.exit(1) +except EXC: + print("...it did, yay.")