/** * @file conf.c * @author Sheng Di (sdi1@anl.gov or disheng222@gmail.com) * @date 2015. * @brief Configuration loading functions for the SZ library. * (C) 2015 by Mathematics and Computer Science (MCS), Argonne National Laboratory. * See COPYRIGHT in top-level directory. */ #include #include "string.h" #include "sz.h" #include "iniparser.h" #include "Huffman.h" #include "pastri.h" /*-------------------------------------------------------------------------*/ /** @brief It reads the configuration given in the configuration file. @return integer 1 if successfull. This function reads the configuration given in the SZ configuration file and sets other required parameters. **/ /*struct node_t *pool; node *qqq; node *qq; int n_nodes = 0, qend; unsigned long **code; unsigned char *cout; int n_inode;*/ unsigned int roundUpToPowerOf2(unsigned int base) { base -= 1; base = base | (base >> 1); base = base | (base >> 2); base = base | (base >> 4); base = base | (base >> 8); base = base | (base >> 16); return base + 1; } void updateQuantizationInfo(int quant_intervals) { exe_params->intvCapacity = quant_intervals; exe_params->intvRadius = quant_intervals/2; } double computeABSErrBoundFromPSNR(double psnr, double threshold, double value_range) { double v1 = psnr + 10 * log10(1-2.0/3.0*threshold); double v2 = v1/(-20); double v3 = pow(10, v2); return value_range * v3; } double computeABSErrBoundFromNORM_ERR(double normErr, size_t nbEle) { return sqrt(3.0/nbEle)*normErr; } /*-------------------------------------------------------------------------*/ /** * * * @return the status of loading conf. file: 1 (success) or 0 (error code); * */ int SZ_ReadConf(const char* sz_cfgFile) { // Check access to SZ configuration file and load dictionary //record the setting in confparams_cpr confparams_cpr = (sz_params*)malloc(sizeof(sz_params)); exe_params = (sz_exedata*)malloc(sizeof(sz_exedata)); int x = 1; char sol_name[256]; char *modeBuf; char *errBoundMode; char *endianTypeString; dictionary *ini; char *par; char *y = (char*)&x; if(*y==1) sysEndianType = LITTLE_ENDIAN_SYSTEM; else //=0 sysEndianType = BIG_ENDIAN_SYSTEM; confparams_cpr->plus_bits = 3; if(sz_cfgFile == NULL || access(sz_cfgFile, F_OK) != 0) { dataEndianType = LITTLE_ENDIAN_DATA; confparams_cpr->sol_ID = SZ; confparams_cpr->max_quant_intervals = 65536; confparams_cpr->maxRangeRadius = confparams_cpr->max_quant_intervals/2; exe_params->intvCapacity = confparams_cpr->maxRangeRadius*2; exe_params->intvRadius = confparams_cpr->maxRangeRadius; confparams_cpr->quantization_intervals = 0; exe_params->optQuantMode = 1; confparams_cpr->predThreshold = 0.99; confparams_cpr->sampleDistance = 100; confparams_cpr->szMode = SZ_BEST_COMPRESSION; confparams_cpr->losslessCompressor = ZSTD_COMPRESSOR; //other option: GZIP_COMPRESSOR; if(confparams_cpr->losslessCompressor==ZSTD_COMPRESSOR) confparams_cpr->gzipMode = 3; //fast mode else confparams_cpr->gzipMode = 1; //high speed mode confparams_cpr->errorBoundMode = SZ_ABS; confparams_cpr->psnr = 90; confparams_cpr->absErrBound = 1E-10; confparams_cpr->relBoundRatio = 1E-10; confparams_cpr->accelerate_pw_rel_compression = 1; confparams_cpr->pw_relBoundRatio = 1E-3; confparams_cpr->segment_size = 36; confparams_cpr->pwr_type = SZ_PWR_MIN_TYPE; confparams_cpr->snapshotCmprStep = 5; confparams_cpr->withRegression = SZ_WITH_LINEAR_REGRESSION; confparams_cpr->randomAccess = 0; //0: no random access , 1: support random access confparams_cpr->protectValueRange = 0; return SZ_SUCCESS; } if (access(sz_cfgFile, F_OK) != 0) { printf("[SZ] Configuration file NOT accessible.\n"); return SZ_FAILED; } //printf("[SZ] Reading SZ configuration file (%s) ...\n", sz_cfgFile); ini = iniparser_load(sz_cfgFile); if (ini == NULL) { printf("[SZ] Iniparser failed to parse the conf. file.\n"); return SZ_FAILED; } endianTypeString = iniparser_getstring(ini, "ENV:dataEndianType", "LITTLE_ENDIAN_DATA"); if(strcmp(endianTypeString, "LITTLE_ENDIAN_DATA")==0) dataEndianType = LITTLE_ENDIAN_DATA; else if(strcmp(endianTypeString, "BIG_ENDIAN_DATA")==0) dataEndianType = BIG_ENDIAN_DATA; else { printf("Error: Wrong dataEndianType: please set it correctly in sz.config.\n"); iniparser_freedict(ini); return SZ_FAILED; } // Reading/setting detection parameters par = iniparser_getstring(ini, "ENV:sol_name", NULL); snprintf(sol_name, 256, "%s", par); if(strcmp(sol_name, "SZ")==0) confparams_cpr->sol_ID = SZ; else if(strcmp(sol_name, "PASTRI")==0) confparams_cpr->sol_ID = PASTRI; else if(strcmp(sol_name, "SZ_Transpose")==0) confparams_cpr->sol_ID = SZ_Transpose; else{ printf("[SZ] Error: wrong solution name (please check sz.config file), sol=%s\n", sol_name); iniparser_freedict(ini); return SZ_FAILED; } if(confparams_cpr->sol_ID==SZ || confparams_cpr->sol_ID==SZ_Transpose) { int max_quant_intervals = iniparser_getint(ini, "PARAMETER:max_quant_intervals", 65536); confparams_cpr->max_quant_intervals = max_quant_intervals; int quantization_intervals = (int)iniparser_getint(ini, "PARAMETER:quantization_intervals", 0); confparams_cpr->quantization_intervals = quantization_intervals; if(quantization_intervals>0) { updateQuantizationInfo(quantization_intervals); confparams_cpr->max_quant_intervals = max_quant_intervals = quantization_intervals; exe_params->optQuantMode = 0; } else //==0 { confparams_cpr->maxRangeRadius = max_quant_intervals/2; exe_params->intvCapacity = confparams_cpr->maxRangeRadius*2; exe_params->intvRadius = confparams_cpr->maxRangeRadius; exe_params->optQuantMode = 1; } if(quantization_intervals%2!=0) { printf("Error: quantization_intervals must be an even number!\n"); iniparser_freedict(ini); return SZ_FAILED; } confparams_cpr->predThreshold = (float)iniparser_getdouble(ini, "PARAMETER:predThreshold", 0); confparams_cpr->sampleDistance = (int)iniparser_getint(ini, "PARAMETER:sampleDistance", 0); modeBuf = iniparser_getstring(ini, "PARAMETER:szMode", NULL); if(modeBuf==NULL) { printf("[SZ] Error: Null szMode setting (please check sz.config file)\n"); iniparser_freedict(ini); return SZ_FAILED; } else if(strcmp(modeBuf, "SZ_BEST_SPEED")==0) confparams_cpr->szMode = SZ_BEST_SPEED; else if(strcmp(modeBuf, "SZ_DEFAULT_COMPRESSION")==0) confparams_cpr->szMode = SZ_DEFAULT_COMPRESSION; else if(strcmp(modeBuf, "SZ_BEST_COMPRESSION")==0) confparams_cpr->szMode = SZ_BEST_COMPRESSION; else { printf("[SZ] Error: Wrong szMode setting (please check sz.config file)\n"); iniparser_freedict(ini); return SZ_FAILED; } modeBuf = iniparser_getstring(ini, "PARAMETER:losslessCompressor", "ZSTD_COMPRESSOR"); if(strcmp(modeBuf, "GZIP_COMPRESSOR")==0) confparams_cpr->losslessCompressor = GZIP_COMPRESSOR; else if(strcmp(modeBuf, "ZSTD_COMPRESSOR")==0) confparams_cpr->losslessCompressor = ZSTD_COMPRESSOR; else { printf("[SZ] Error: Wrong losslessCompressor setting (please check sz.config file)\n");\ printf("No Such a lossless compressor: %s\n", modeBuf); iniparser_freedict(ini); return SZ_FAILED; } modeBuf = iniparser_getstring(ini, "PARAMETER:withLinearRegression", "YES"); if(strcmp(modeBuf, "YES")==0 || strcmp(modeBuf, "yes")==0) confparams_cpr->withRegression = SZ_WITH_LINEAR_REGRESSION; else confparams_cpr->withRegression = SZ_NO_REGRESSION; modeBuf = iniparser_getstring(ini, "PARAMETER:gzipMode", "Gzip_BEST_SPEED"); if(modeBuf==NULL) { printf("[SZ] Error: Null Gzip mode setting (please check sz.config file)\n"); iniparser_freedict(ini); return SZ_FAILED; } else if(strcmp(modeBuf, "Gzip_NO_COMPRESSION")==0) confparams_cpr->gzipMode = 0; else if(strcmp(modeBuf, "Gzip_BEST_SPEED")==0) confparams_cpr->gzipMode = 1; else if(strcmp(modeBuf, "Gzip_BEST_COMPRESSION")==0) confparams_cpr->gzipMode = 9; else if(strcmp(modeBuf, "Gzip_DEFAULT_COMPRESSION")==0) confparams_cpr->gzipMode = -1; else { printf("[SZ] Error: Wrong gzip Mode (please check sz.config file)\n"); return SZ_FAILED; } modeBuf = iniparser_getstring(ini, "PARAMETER:zstdMode", "Zstd_HIGH_SPEED"); if(modeBuf==NULL) { printf("[SZ] Error: Null Zstd mode setting (please check sz.config file)\n"); iniparser_freedict(ini); return SZ_FAILED; } else if(strcmp(modeBuf, "Zstd_BEST_SPEED")==0) confparams_cpr->gzipMode = 1; else if(strcmp(modeBuf, "Zstd_HIGH_SPEED")==0) confparams_cpr->gzipMode = 3; else if(strcmp(modeBuf, "Zstd_HIGH_COMPRESSION")==0) confparams_cpr->gzipMode = 19; else if(strcmp(modeBuf, "Zstd_BEST_COMPRESSION")==0) confparams_cpr->gzipMode = 22; else if(strcmp(modeBuf, "Zstd_DEFAULT_COMPRESSION")==0) confparams_cpr->gzipMode = 3; else { printf("[SZ] Error: Wrong zstd Mode (please check sz.config file)\n"); return SZ_FAILED; } modeBuf = iniparser_getstring(ini, "PARAMETER:protectValueRange", "YES"); if(strcmp(modeBuf, "YES")==0) confparams_cpr->protectValueRange = 1; else confparams_cpr->protectValueRange = 0; confparams_cpr->randomAccess = (int)iniparser_getint(ini, "PARAMETER:randomAccess", 0); //TODO confparams_cpr->snapshotCmprStep = (int)iniparser_getint(ini, "PARAMETER:snapshotCmprStep", 5); errBoundMode = iniparser_getstring(ini, "PARAMETER:errorBoundMode", NULL); if(errBoundMode==NULL) { printf("[SZ] Error: Null error bound setting (please check sz.config file)\n"); iniparser_freedict(ini); return SZ_FAILED; } else if(strcmp(errBoundMode,"ABS")==0||strcmp(errBoundMode,"abs")==0) confparams_cpr->errorBoundMode=SZ_ABS; else if(strcmp(errBoundMode, "REL")==0||strcmp(errBoundMode,"rel")==0) confparams_cpr->errorBoundMode=REL; else if(strcmp(errBoundMode, "VR_REL")==0||strcmp(errBoundMode, "vr_rel")==0) confparams_cpr->errorBoundMode=REL; else if(strcmp(errBoundMode, "ABS_AND_REL")==0||strcmp(errBoundMode, "abs_and_rel")==0) confparams_cpr->errorBoundMode=ABS_AND_REL; else if(strcmp(errBoundMode, "ABS_OR_REL")==0||strcmp(errBoundMode, "abs_or_rel")==0) confparams_cpr->errorBoundMode=ABS_OR_REL; else if(strcmp(errBoundMode, "PW_REL")==0||strcmp(errBoundMode, "pw_rel")==0) confparams_cpr->errorBoundMode=PW_REL; else if(strcmp(errBoundMode, "PSNR")==0||strcmp(errBoundMode, "psnr")==0) confparams_cpr->errorBoundMode=PSNR; else if(strcmp(errBoundMode, "ABS_AND_PW_REL")==0||strcmp(errBoundMode, "abs_and_pw_rel")==0) confparams_cpr->errorBoundMode=ABS_AND_PW_REL; else if(strcmp(errBoundMode, "ABS_OR_PW_REL")==0||strcmp(errBoundMode, "abs_or_pw_rel")==0) confparams_cpr->errorBoundMode=ABS_OR_PW_REL; else if(strcmp(errBoundMode, "REL_AND_PW_REL")==0||strcmp(errBoundMode, "rel_and_pw_rel")==0) confparams_cpr->errorBoundMode=REL_AND_PW_REL; else if(strcmp(errBoundMode, "REL_OR_PW_REL")==0||strcmp(errBoundMode, "rel_or_pw_rel")==0) confparams_cpr->errorBoundMode=REL_OR_PW_REL; else if(strcmp(errBoundMode, "NORM")==0||strcmp(errBoundMode, "norm")==0) confparams_cpr->errorBoundMode=NORM; else { printf("[SZ] Error: Wrong error bound mode (please check sz.config file)\n"); iniparser_freedict(ini); return SZ_FAILED; } confparams_cpr->absErrBound = (double)iniparser_getdouble(ini, "PARAMETER:absErrBound", 0); confparams_cpr->relBoundRatio = (double)iniparser_getdouble(ini, "PARAMETER:relBoundRatio", 0); confparams_cpr->psnr = (double)iniparser_getdouble(ini, "PARAMETER:psnr", 0); confparams_cpr->normErr = (double)iniparser_getdouble(ini, "PARAMETER:normErr", 0); confparams_cpr->pw_relBoundRatio = (double)iniparser_getdouble(ini, "PARAMETER:pw_relBoundRatio", 0); confparams_cpr->segment_size = (int)iniparser_getint(ini, "PARAMETER:segment_size", 0); confparams_cpr->accelerate_pw_rel_compression = (int)iniparser_getint(ini, "PARAMETER:accelerate_pw_rel_compression", 1); modeBuf = iniparser_getstring(ini, "PARAMETER:pwr_type", "MIN"); if(strcmp(modeBuf, "MIN")==0) confparams_cpr->pwr_type = SZ_PWR_MIN_TYPE; else if(strcmp(modeBuf, "AVG")==0) confparams_cpr->pwr_type = SZ_PWR_AVG_TYPE; else if(strcmp(modeBuf, "MAX")==0) confparams_cpr->pwr_type = SZ_PWR_MAX_TYPE; else if(modeBuf!=NULL) { printf("[SZ] Error: Wrong pwr_type setting (please check sz.config file).\n"); iniparser_freedict(ini); return SZ_FAILED; } else //by default confparams_cpr->pwr_type = SZ_PWR_AVG_TYPE; //initialization for Huffman encoding //SZ_Reset(); } else if(confparams_cpr->sol_ID == PASTRI) {//load parameters for PSTRI pastri_par.bf[0] = (int)iniparser_getint(ini, "PARAMETER:basisFunction_0", 0); pastri_par.bf[1] = (int)iniparser_getint(ini, "PARAMETER:basisFunction_1", 0); pastri_par.bf[2] = (int)iniparser_getint(ini, "PARAMETER:basisFunction_2", 0); pastri_par.bf[3] = (int)iniparser_getint(ini, "PARAMETER:basisFunction_3", 0); pastri_par.numBlocks = (int)iniparser_getint(ini, "PARAMETER:numBlocks", 0); confparams_cpr->absErrBound = pastri_par.originalEb = (double)iniparser_getdouble(ini, "PARAMETER:absErrBound", 1E-3); } iniparser_freedict(ini); return SZ_SUCCESS; } /*-------------------------------------------------------------------------*/ /** @brief It reads and tests the configuration given. @return integer 1 if successfull. This function reads the configuration file. Then test that the configuration parameters are correct (including directories). **/ /*-------------------------------------------------------------------------*/ int SZ_LoadConf(const char* sz_cfgFile) { int res = SZ_ReadConf(sz_cfgFile); if (res != SZ_SUCCESS) { printf("[SZ] ERROR: Impossible to read configuration.\n"); return SZ_FAILED; } return SZ_SUCCESS; } int checkVersion(char* version) { int i = 0; for(;i<3;i++) if(version[i]!=versionNumber[i]) return 0; return 1; } inline int computeVersion(int major, int minor, int revision) { return major*10000+minor*100+revision; } int checkVersion2(char* version) { int major = version[0]; int minor = version[1]; int revision = version[2]; int preVersion = 20108; int givenVersion = computeVersion(major, minor, revision); //int currentVersion = computeVersion(SZ_VER_MAJOR, SZ_VER_MINOR, SZ_VER_REVISION); if(givenVersion < preVersion) //only for old version (older than 2.1.8), we will check whether version is consistent exactly. return checkVersion(version); return 1; } void initSZ_TSC() { sz_tsc = (sz_tsc_metadata*)malloc(sizeof(sz_tsc_metadata)); memset(sz_tsc, 0, sizeof(sz_tsc_metadata)); /*sprintf(sz_tsc->metadata_filename, "sz_tsc_metainfo.txt"); sz_tsc->metadata_file = fopen(sz_tsc->metadata_filename, "wb"); if (sz_tsc->metadata_file == NULL) { printf("Failed to open sz_tsc_metainfo.txt file for writing metainfo.\n"); exit(1); } fputs("#metadata of the time-step based compression\n", sz_tsc->metadata_file); */ } /*double fabs(double value) { if(value<0) return -value; else return value; }*/