From cc2f20c4ed63f8c02f2f082f4fa4dcc08f4dff71 Mon Sep 17 00:00:00 2001 From: cinderellaTiger <114470934+cinderellaTiger@users.noreply.github.com> Date: Tue, 21 Feb 2023 23:31:23 +0800 Subject: [PATCH] Update introduction_en.ipynb (#5726) --- modelcenter/PP-HelixFold/introduction_en.ipynb | 13 ++++++------- 1 file changed, 6 insertions(+), 7 deletions(-) diff --git a/modelcenter/PP-HelixFold/introduction_en.ipynb b/modelcenter/PP-HelixFold/introduction_en.ipynb index 9f3ad10d..dc371da4 100644 --- a/modelcenter/PP-HelixFold/introduction_en.ipynb +++ b/modelcenter/PP-HelixFold/introduction_en.ipynb @@ -34,9 +34,9 @@ "To reproduce the results reported in our paper, specific environment settings are required as below. \n", "\n", "- python: 3.7\n", - "- cuda: 11.2\n", - "- cudnn: 8.10.1\n", - "- nccl: 2.12.12\n", + "- cuda: 11.6\n", + "- cudnn: 8.4.0\n", + "- nccl: 2.14.3\n", "\n", "\n", "## 5. How to Use the Model\n", @@ -50,7 +50,7 @@ "```bash\n", "git clone https://github.com/PaddlePaddle/PaddleHelix.git # download PaddleHelix\n", "cd /apps/protein_folding/helixfold\n", - "wget https://paddle-wheel.bj.bcebos.com/develop/linux/linux-gpu-cuda11.2-cudnn8-mkl-gcc8.2-avx/paddlepaddle_gpu-0.0.0.post112-cp37-cp37m-linux_x86_64.whl\n", + "wget https://baidu-nlp.bj.bcebos.com/PaddleHelix/HelixFold/paddlepaddle_gpu-0.0.0.post116-cp37-cp37m-linux_x86_64.whl\n", "sh setup_env\n", "conda activate helixfold # activate the conda environment\n", "```\n", @@ -58,9 +58,8 @@ "\n", "In order to run scripts with DAP/BP/DP-DAP-BP mode, you also need to install `ppfleetx`. Please refer to [here](https://github.com/PaddlePaddle/PaddleFleetX/tree/release/2.4/projects/protein_folding) for more details.\n", "```bash\n", - "git clone https://github.com/PaddlePaddle/PaddleFleetX.git\n", - "git checkout release/2.4 # change branch\n", - "python setup.py develop # install ppfleetx\n", + "wget https://baidu-nlp.bj.bcebos.com/PaddleHelix/HelixFold/ppfleetx-0.0.0-py3-none-any.whl\n", + "python -m pip install ppfleetx-0.0.0-py3-none-any.whl # install ppfleetx\n", "```\n", "\n", "### Usage\n", -- GitLab