hdfs_utils.py 17.2 KB
Newer Older
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54
#   Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""HDFS Utils"""

import os
import subprocess
import multiprocessing
from datetime import datetime

import re
import copy
import errno

import logging

__all__ = ["HDFSClient", "multi_download"]

logging.basicConfig(format='%(asctime)s - %(levelname)s - %(message)s')
_logger = logging.getLogger("hdfs_utils")
_logger.setLevel(logging.INFO)


class HDFSClient(object):
    def __init__(self, hadoop_home, configs):
        self.pre_commands = []
        hadoop_bin = '%s/bin/hadoop' % hadoop_home
        self.pre_commands.append(hadoop_bin)
        dfs = 'fs'
        self.pre_commands.append(dfs)

        for k, v in configs.iteritems():
            config_command = '-D%s=%s' % (k, v)
            self.pre_commands.append(config_command)

    def __run_hdfs_cmd(self, commands, retry_times=5):
        whole_commands = copy.deepcopy(self.pre_commands)
        whole_commands.extend(commands)

        print('Running system command: {0}'.format(' '.join(whole_commands)))

        ret_code = 0
        ret_out = None
        ret_err = None
H
heqiaozhi 已提交
55
        whole_commands = " ".join(whole_commands)
56 57
        for x in range(retry_times + 1):
            proc = subprocess.Popen(
H
heqiaozhi 已提交
58
                whole_commands, stdout=subprocess.PIPE, stderr=subprocess.PIPE, shell=True)
59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506
            (output, errors) = proc.communicate()
            ret_code, ret_out, ret_err = proc.returncode, output, errors
            if ret_code:
                _logger.warn(
                    'Times: %d, Error running command: %s. Return code: %d, Error: %s'
                    % (x, ' '.join(whole_commands), proc.returncode, errors))
            else:
                break
        return ret_code, ret_out, ret_err

    def upload(self, hdfs_path, local_path, overwrite=False, retry_times=5):
        """
            upload the local file to hdfs
            args:
                local_file_path: the local file path
                remote_file_path: default value(${OUTPUT_PATH}/${SYS_USER_ID}/${SYS_JOB_ID}/tmp)
            return:
                True or False
        """
        assert hdfs_path is not None
        assert local_path is not None and os.path.exists(local_path)

        if os.path.isdir(local_path):
            _logger.warn(
                "The Local path: {} is dir and I will support it later, return".
                format(local_path))
            return

        base = os.path.basename(local_path)
        if not self.is_exist(hdfs_path):
            self.makedirs(hdfs_path)
        else:
            if self.is_exist(os.path.join(hdfs_path, base)):
                if overwrite:
                    _logger.error(
                        "The HDFS path: {} is exist and overwrite is True, delete it".
                        format(hdfs_path))
                    self.delete(hdfs_path)
                else:
                    _logger.error(
                        "The HDFS path: {} is exist and overwrite is False, return".
                        format(hdfs_path))
                    return False

        put_commands = ["-put", local_path, hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(put_commands,
                                                         retry_times)
        if returncode:
            _logger.error("Put local path: {} to HDFS path: {} failed".format(
                local_path, hdfs_path))
            return False
        else:
            _logger.info("Put local path: {} to HDFS path: {} successfully".
                         format(local_path, hdfs_path))
            return True

    def download(self, hdfs_path, local_path, overwrite=False, unzip=False):
        """
            download from hdfs
            args:
                local_file_path: the local file path
                remote_file_path: remote dir on hdfs
            return:
                True or False
        """
        _logger.info('Downloading %r to %r.', hdfs_path, local_path)
        _logger.info('Download of %s to %r complete.', hdfs_path, local_path)

        if not self.is_exist(hdfs_path):
            print("HDFS path: {} do not exist".format(hdfs_path))
            return False
        if self.is_dir(hdfs_path):
            _logger.error(
                "The HDFS path: {} is dir and I will support it later, return".
                format(hdfs_path))

        if os.path.exists(local_path):
            base = os.path.basename(hdfs_path)
            local_file = os.path.join(local_path, base)
            if os.path.exists(local_file):
                if overwrite:
                    os.remove(local_file)
                else:
                    _logger.error(
                        "The Local path: {} is exist and overwrite is False, return".
                        format(local_file))
                    return False

        self.make_local_dirs(local_path)

        download_commands = ["-get", hdfs_path, local_path]
        returncode, output, errors = self.__run_hdfs_cmd(download_commands)
        if returncode:
            _logger.error("Get local path: {} from HDFS path: {} failed".format(
                local_path, hdfs_path))
            return False
        else:
            _logger.info("Get local path: {} from HDFS path: {} successfully".
                         format(local_path, hdfs_path))
            return True

    def is_exist(self, hdfs_path=None):
        """
            whether the remote hdfs path exists?
            args:
                remote_file_path: default value(${OUTPUT_PATH}/${SYS_USER_ID}/${SYS_JOB_ID}/tmp)
                fs_name: The default values are the same as in the job configuration
                fs_ugi: The default values are the same as in the job configuration
            return:
                True or False
        """
        exist_cmd = ['-test', '-e', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            exist_cmd, retry_times=1)

        if returncode:
            _logger.error("HDFS is_exist HDFS path: {} failed".format(
                hdfs_path))
            return False
        else:
            _logger.info("HDFS is_exist HDFS path: {} successfully".format(
                hdfs_path))
            return True

    def is_dir(self, hdfs_path=None):
        """
            whether the remote hdfs path exists?
            args:
                remote_file_path: default value(${OUTPUT_PATH}/${SYS_USER_ID}/${SYS_JOB_ID}/tmp)
                fs_name: The default values are the same as in the job configuration
                fs_ugi: The default values are the same as in the job configuration
            return:
                True or False
        """

        if not self.is_exist(hdfs_path):
            return False

        dir_cmd = ['-test', '-d', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(dir_cmd, retry_times=1)

        if returncode:
            _logger.error("HDFS path: {} failed is not a directory".format(
                hdfs_path))
            return False
        else:
            _logger.info("HDFS path: {} successfully is a directory".format(
                hdfs_path))
            return True

    def delete(self, hdfs_path):
        """Remove a file or directory from HDFS.

        :param hdfs_path: HDFS path.
        :param recursive: Recursively delete files and directories. By default,
          this method will raise an :class:`HdfsError` if trying to delete a
          non-empty directory.

        This function returns `True` if the deletion was successful and `False` if
        no file or directory previously existed at `hdfs_path`.

        """
        _logger.info('Deleting %r.', hdfs_path)

        if not self.is_exist(hdfs_path):
            _logger.warn("HDFS path: {} do not exist".format(hdfs_path))
            return True

        if self.is_dir(hdfs_path):
            del_cmd = ['-rmr', hdfs_path]
        else:
            del_cmd = ['-rm', hdfs_path]

        returncode, output, errors = self.__run_hdfs_cmd(del_cmd, retry_times=0)

        if returncode:
            _logger.error("HDFS path: {} delete files failure".format(
                hdfs_path))
            return False
        else:
            _logger.info("HDFS path: {} delete files successfully".format(
                hdfs_path))
            return True

    def rename(self, hdfs_src_path, hdfs_dst_path, overwrite=False):
        """Move a file or folder.

        :param hdfs_src_path: Source path.
        :param hdfs_dst_path: Destination path. If the path already exists and is
          a directory, the source will be moved into it. If the path exists and is
          a file, or if a parent destination directory is missing, this method will
          raise an :class:`HdfsError`.

        """
        assert hdfs_src_path is not None
        assert hdfs_dst_path is not None

        if not self.is_exist(hdfs_src_path):
            _logger.info("HDFS path do not exist: {}".format(hdfs_src_path))
        if self.is_exist(hdfs_dst_path) and not overwrite:
            _logger.error("HDFS path is exist: {} and overwrite=False".format(
                hdfs_dst_path))

        rename_command = ['-mv', hdfs_src_path, hdfs_dst_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            rename_command, retry_times=1)

        if returncode:
            _logger.error("HDFS rename path: {} to {} failed".format(
                hdfs_src_path, hdfs_dst_path))
            return False
        else:
            _logger.info("HDFS rename path: {} to {} successfully".format(
                hdfs_src_path, hdfs_dst_path))
            return True

    @staticmethod
    def make_local_dirs(local_path):
        try:
            os.makedirs(local_path)
        except OSError as e:
            if e.errno != errno.EEXIST:
                raise

    def makedirs(self, hdfs_path):
        """Create a remote directory, recursively if necessary.

        :param hdfs_path: Remote path. Intermediate directories will be created
          appropriately.
        """
        _logger.info('Creating directories to %r.', hdfs_path)
        assert hdfs_path is not None

        if self.is_exist(hdfs_path):
            return

        mkdirs_commands = ['-mkdir', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            mkdirs_commands, retry_times=1)

        if returncode:
            _logger.error("HDFS mkdir path: {} failed".format(hdfs_path))
            return False
        else:
            _logger.error("HDFS mkdir path: {} successfully".format(hdfs_path))
            return True

    def ls(self, hdfs_path):
        assert hdfs_path is not None

        if not self.is_exist(hdfs_path):
            return []

        ls_commands = ['-ls', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            ls_commands, retry_times=1)

        if returncode:
            _logger.error("HDFS list path: {} failed".format(hdfs_path))
            return []
        else:
            _logger.info("HDFS list path: {} successfully".format(hdfs_path))

            ret_lines = []
            regex = re.compile('\s+')
            out_lines = output.strip().split("\n")
            for line in out_lines:
                re_line = regex.split(line)
                if len(re_line) == 8:
                    ret_lines.append(re_line[7])
            return ret_lines

    def lsr(self, hdfs_path, only_file=True, sort=True):
        def sort_by_time(v1, v2):
            v1_time = datetime.strptime(v1[1], '%Y-%m-%d %H:%M')
            v2_time = datetime.strptime(v2[1], '%Y-%m-%d %H:%M')
            return v1_time > v2_time

        assert hdfs_path is not None

        if not self.is_exist(hdfs_path):
            return []

        ls_commands = ['-lsr', hdfs_path]
        returncode, output, errors = self.__run_hdfs_cmd(
            ls_commands, retry_times=1)

        if returncode:
            _logger.error("HDFS list all files: {} failed".format(hdfs_path))
            return []
        else:
            _logger.info("HDFS list all files: {} successfully".format(
                hdfs_path))
            lines = []
            regex = re.compile('\s+')
            out_lines = output.strip().split("\n")
            for line in out_lines:
                re_line = regex.split(line)
                if len(re_line) == 8:
                    if only_file and re_line[0][0] == "d":
                        continue
                    else:
                        lines.append(
                            (re_line[7], re_line[5] + " " + re_line[6]))
            if sort:
                sorted(lines, cmp=sort_by_time)
            ret_lines = [ret[0] for ret in lines]
            return ret_lines


def multi_upload(client,
                 hdfs_path,
                 local_path,
                 multi_processes=5,
                 overwrite=False):
    """
    :param overwrite: will overwrite hdfs file or not
    :param multi_processes: the upload data process at the same time, default=5
    :param client: instance of HDFSClient
    :param hdfs_path: path on hdfs
    :param local_path: path on local
    :return:
    """

    def __subprocess_upload(datas):
        for data in datas:
            re_path = os.path.relpath(os.path.dirname(data), local_path)
            hdfs_re_path = os.path.join(hdfs_path, re_path)
            client.upload(hdfs_re_path, data, overwrite, retry_times=5)

    def get_local_files(path):
        rlist = []

        if not os.path.isdir(path):
            return rlist

        for dirname, folder, files in os.walk(path):
            for i in files:
                t = os.path.join(dirname, i)
                rlist.append(t)
        return rlist

    assert isinstance(client, HDFSClient)

    all_files = get_local_files(local_path)
    if not all_files:
        _logger.info("there are nothing need to upload, exit")
        return
    _logger.info("Start {} multi process to upload datas".format(
        multi_processes))
    procs = []
    for i in range(multi_processes):
        process_datas = all_files[i::multi_processes]
        p = multiprocessing.Process(
            target=__subprocess_upload, args=(process_datas, ))
        procs.append(p)
        p.start()

    # complete the processes
    for proc in procs:
        proc.join()

    _logger.info("Finish {} multi process to upload datas".format(
        multi_processes))


def multi_download(client,
                   hdfs_path,
                   local_path,
                   trainer_id,
                   trainers,
                   multi_processes=5):
    """
    multi_download
    :param client: instance of HDFSClient
    :param hdfs_path: path on hdfs
    :param local_path: path on local
    :param trainer_id: current trainer id
    :param trainers: all trainers number
    :param multi_processes: the download data process at the same time, default=5
    :return: None
    """

    def __subprocess_download(datas):
        for data in datas:
            re_path = os.path.relpath(os.path.dirname(data), hdfs_path)
            local_re_path = os.path.join(local_path, re_path)
            client.download(data, local_re_path)

    assert isinstance(client, HDFSClient)

    client.make_local_dirs(local_path)
    _logger.info("Make local dir {} successfully".format(local_path))

    all_need_download = client.lsr(hdfs_path, sort=True)
    need_download = all_need_download[trainer_id::trainers]
    _logger.info("Get {} files From all {} files need to be download from {}".
                 format(len(need_download), len(all_need_download), hdfs_path))

    _logger.info("Start {} multi process to download datas".format(
        multi_processes))
    procs = []
    for i in range(multi_processes):
        process_datas = need_download[i::multi_processes]
        p = multiprocessing.Process(
            target=__subprocess_download, args=(process_datas, ))
        procs.append(p)
        p.start()

    # complete the processes
    for proc in procs:
        proc.join()

    _logger.info("Finish {} multi process to download datas".format(
        multi_processes))

    local_downloads = []
    for data in need_download:
        data_name = os.path.basename(data)
        re_path = os.path.relpath(os.path.dirname(data), hdfs_path)
        local_re_path = os.path.join(local_path, re_path, data_name)
        local_downloads.append(local_re_path)

    return local_downloads


if __name__ == "__main__":
    hadoop_home = "/home/client/hadoop-client/hadoop/"

    configs = {
        "fs.default.name": "hdfs://xxx.hadoop.com:54310",
        "hadoop.job.ugi": "hello,hello123"
    }

    client = HDFSClient(hadoop_home, configs)

    client.ls("/user/com/train-25")
    files = client.lsr("/user/com/train-25/models")

    downloads = multi_download(
        client,
        "/user/com/train-25/model",
        "/home/xx/data1",
        1,
        5,
        multi_processes=5)

    multi_upload(client, "/user/com/train-25/model", "/home/xx/data1")